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22 protocols using kcjunior

1

Cell Viability Assay using CellTiter 96® AQueous

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MTS assays were performed, according to the manufacturer’s protocol (CellTiter 96® AQueous One Solution Cell Proliferation Assay; Promega Corporation, Madison, WI, USA). Briefly, hCM or hCF cells were seeded into each well of 96-well plates and were treated for 48 h with patients’ sera or PBS (control), as described above. A total of 20 µL CellTiter 96® AQueous One Solution reagent was added to each well, and the absorbance at 490 nm was measured after 2 h incubation in 37 °C (KCjunior™; BioTek Instruments, Inc., Winooski, VT, USA). The viability of the untreated cells was treated as 100%.
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2

Placental Hormone Response to TBBPA

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The levels of placental hormones were measured to determine the response curve to different TBBPA concentrations during various periods of exposure. The amounts of β-hCG and progesterone were determined in the media by an enzyme-linked immunosorbent assay (ELISA) using commercial kits (DRG, Marburg, Germany) according to the manufacturer’s instructions. For β-hCG, the sensitivity of the assay was <1 mlU/ml, and the intra- and inter-assay CV values were 4 and 7.3 %, respectively. For progesterone, the sensitivity of the assay was 0.045 ng/ml, and the intra- and inter-assay CV values were 6.99 and 4.34 %, respectively. The sample concentrations were calculated using a best-fit four-parameter logistic calibration curve (KCJunior; Bio-Tek). Each treatment was analyzed in ten wells, and each experiment was repeated three times.
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3

Fecal Calprotectin Quantification Protocol

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100 mg of fecal sample and 4.9 ml of Extraction Buffer were mixed for 3 min in the Fecal Extraction Device (CALPRO AS, Lysaker, Norway) on a Ratek MPS1 plate shaker. Fecal extracts were stored at 4 °C and used within 5 days. Calprotectin levels were measured by enzyme linked immunosorbent assay (CALPROLAB™, CALPRO AS) according to manufacturer’s protocol. The optical density was measured at 405 nm using an ELx808™ Absorbance Microplate Reader (BioTek) and the KCjunior™ (BioTek) package to determine calprotectin levels.
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4

Cytotoxicity Assay of PSP on Cancer Cells

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The cell proliferation and cytotoxicity of PSP to HCT116 and HT29 cell lines were tested by tetrazolium-based MTT method (29 (link)) in time end-point manners. Briefly, at the beginning, the single cells solution was (3,000 cells/well) allocated into each of 96 wells with 100 μL McCoy’s 5a and RPMI 1640 complete medium. The cells were treated with different concentrations of PSP (0, 1.5, 4.5, and 13.5 mg/mL) or etoposide (80 μg/mL) for 0, 2, 4, and 6 days. Subsequently, 10 μL of the MTT dye solution (5 mg/mL) was added to each well and incubated at 37°C for 4 hours. After incubation and removing the supernatants, 100 μL dimethylsulfoxide (DMSO) was added to each well. One hour after the addition of the solubilization solution, the content of the wells was mixed and read by the 96-well plate scanning spectrophotometer (μQuant, USA) and quantitative software (KC-junior, Bio-Tek Instruments, Inc. USA) at an absorbance of 595 nm for quantitative analysis.
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5

Lysozyme Quantification in Human Milk

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A two-step immunoenzymatic method based on the ELISA test (Innovative Research Inc., Novi, MI USA) was used for the measurement of lysozyme levels [8 ]. The reading was performed at 405 nm, 30 min after adding the dye, using the µQuant reagent (Bio Tek, Winooski, VT, USA), while the processing of results was performed using the KCJunior (BioTek, Winooski, VT, USA). Human milk lysozyme was used as standard (Sigma-Aldrich). The obtained results were expressed in μg/mL. Imprecision of the method was 4.1%.
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6

Astrocytic Death Quantification

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Astrocytic death was assessed by measurement of released LDH using a CytoTox-96 kit (Promega, Madison, WI, U.S.A.). Results were analyzed with microplate data analysis software, KC junior (Bio-Tek Instruments, Inc.).
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7

Quantifying ADAM10 and ADAM17 Protein Levels

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ADAM10 and ADAM17 protein concentrations in tissue homogenates were determined by enzyme immunoassay using ADAM10 and 17 assay kits (Cloud-Clone Corp., Houston, TX, USA) according to the manufacturer’s instructions. To determine the concentrations of the tested samples, a calibration curve was prepared using the standards included in the kit. Plates were read by Bio-Tek µQuant Universal Microplate Spectrophotometer (Bio-Tek, Winooski, VT, USA), using 450 nm as the primary wavelength. Data Analysis Software KCJunior (Bio-Tek, Winooski, VT, USA) was used. All standards and samples were run in duplicate. The absorbance was transformed into concentration.
The ADAM10 and 17 protein concentrations for each sample were normalized to the total amount of protein in the tissue lysates. Values are expressed in pg/µg protein for ADAM10 and for ADAM17 in ng/µg protein.
All immunoassays were performed at the Department of Medical and Molecular Biology, Faculty of Medical Sciences in Zabrze, Medical University of Silesia in Katowice.
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8

Quantification of Serum TNF-α by ELISA

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The concentration of TNFα was measured in blood serum by ELISA method using goat anti-rabbit TNFα antibody as capture antibody and biotinylated, monoclonal anti-rabbit TNFα antibody as tracer (both from BD Pharmingen, USA). The assay was performed according to the manufacturer's instruction: goat antibody was immobilized on ELISA plates (Maxisorp, Nunc, Denmark) and bovine serum albumin was used for blocking of unbound sites. Standard curve was constructed with the use of rabbit TNFα (0,05–10 ng/mL; BD Pharmingen, USA) in BSA solution. Serum samples and TNFα standards were incubated for 2 hours and washed out with PBST. Next, biotinylated anti-TNFα was incubated for 1 hour. Immobilized immunocomplexes were detected with streptavidin-horseradish peroxidase conjugate (Dako-Cytomation, Denmark; 30 minutes) and visualized using TMB Supersensitive System (Sigma-Aldrich, USA). Then, the reaction was stopped with 0,5 M sulfuric acid. The absorbance was measured on PowerWave XS ELISA plate reader (BioTek, USA; 450 nm/630 nm as reference). KCJunior (a computer program) (BioTek, USA) was used to collect data. Results were presented as pg of TNFα per mL of serum [pg/mL]. Interassay error was 6.4%.
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9

Cortisol, Testosterone, and Protein Quantification

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The commercial ELISA (Diapra, Italy) was used to determine cortisol and testosterone levels. The analytical procedure was in accordance with the manufacturer's instructions in the technical manuals supplied with the kits. Absorbance readings were taken using a µQuant reader (Biotek, USA), while the results were processed using KCJunior (Biotek, USA). The method’s sensitivity was 0.12 ng/mL for cortisol and 3.28 pg/mL for testosterone. The method's imprecision was 6.2% and 7.9%, respectively.
Total protein was determined using the Lowry method: This method uses the reactions between peptide bonds and tyrosine and Folin-Ciocalteu reagent. The absorbance of the resulting color was read at 650–750 nm, 30 min after the reagent addition. Bovine serum albumin water solution (BSA – Sigma Aldrich, Germany) at slightly basic pH was used as standard. The results obtained were presented in mg/mL. Measurement imprecision of the method was 6.5%.
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10

Cell Viability Assay with CCK-8

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Cell viability assays were carried out with Cell Counting Kit-8 (RiboBio, China) according to the manufacturer’s instructions. In brief, 10 μL CCK8 solution in 100 μL complete culture medium was added to each well of the 96-well plate and further incubated for 3 h. Then, the absorbance was measured at 450 nm optical density in a microplate reader (KC junior, BioTek, United States). The cell viability was calculated by the mean of the optical density values in 6 repeat wells.
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