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20 protocols using powerscan 4

1

Liposomal Oxidative Stress Assay

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Phosphatidylcholine (PC) and vitamin E-stripped corn oil were dispersed at a concentration of 16 mg/ml in chelex-treated milli-Q water, as previously described, with modifications.(19 (link)) Liposomes from Vitamin E-stripped corn oil were prepared with sonication for 5 min. The PC suspension was prepared with extensive vortexing. These samples were divided into 96-well clear bottom plates and treated with NEAPP. TBARS were measured according to the manufacturer’s instructions. In brief, samples were incubated with a chromogenic reagent for 20 min at room temperature in 96-well black plates (Sumitomo Bakelite, Tokyo). The fluorometric assay was performed with PowerScan4 (DS Pharma Biomedical, Osaka). MDA was used as a standard.
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2

Wnt3A and Verapamil Effects on ATDC5 Chondrocyte Differentiation

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ATDC5 cells were supplied by the Riken BioResource Center (Tsukuba, Japan). ATDC5 cells were cultured in DMEM/F12 (a mixture of Dulbecco's modified Eagle's medium and Ham's F12 medium) (Sigma–Aldrich) supplemented with 5% fetal bovine serum (FBS, Thermo Scientific). ATDC5 cells were differentiated into chondrocytes with insulin-transferrin-selenite (ITS, Invitrogen) for two weeks, and were treated with Wnt3A-CM as well as with 0, 2.5, 5, 10, and 25 μM verapamil. After 72 hours, cells were fixed with methanol for 30 minutes at −20°C, and stained overnight with 0.5% Alcian Blue 8 GX (Sigma) in 1N HCl. For quantitative analyses, Alcian blue-stained cells were lysed in 200 μl of 6 M guanidine HCl for six hours at room temperature. The optical density of the extracted dye was measured at 630 nm using PowerScan 4 (DS Pharma Biomedical).
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3

Alamar Blue Cell Viability Assay

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The cell viability assay was performed as described previously [35 (link)]. We performed an Alamar Blue assay (alamarBlue cell viability reagent; Invitrogen, Carlsbad, CA) according to the manufacturer's instructions. Cells were plated in 96-well plates and incubated for 24 h at 37°C in the culture medium containing MWCNTs in a dispersant or in a control medium containing only dispersant without MWCNTs. Viable cells metabolized the dye, resulting in increased fluorescence detected by excitation/emission at 530/590 nm using a fluorescence multiplate reader (PowerScan 4; DS Pharma Biomedical, Osaka, Japan). Cell viability was calculated as follows: percent cytotoxicity = 100 × experimental value/control value. The test media were assayed six times for each treatment condition.
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4

Quantifying GUS Activity in Plant Tissues

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NAA and DEX treatments were performed by submerging plants into half-strength Gamborg’s B5 liquid medium [81 (link)] containing 10 μM NAA and/or 10 μM DEX for 12 h. GUS activity was then measured by monitoring cleavage of the β-glucuronidase substrate 4-methylumbelliferyl β-D-glucuronide (MUG) as described previously [29 (link)] with some modifications. After adjusting the concentration of extracted protein to 10 μg/70 μl extraction buffer, 20 μl of methanol and 10 μl of 10 mM MUG were added. After incubation at 37°C for 30 min, 900 μl of 200 mM sodium carbonate was added to stop the reaction. Fluorescence (460 nm emission/360 nm excitation) of liberated 4-methylumbelliferone (MU) was measured on Powerscan4 (DS Pharma Biomedical, Osaka, Japan).
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5

Evaluating Cell Death and Uptake of CNTs

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The Met5A human mesothelial cell line, immortalized with SV40, was used. M199 containing 10% fetal bovine serum (#S1780, Biowest; Nuaillé, France) and 1% antibiotic-antimyotic (#15240-062, GIBCO; Grand Island, NY) was used in a humidified incubator with 5% CO2 at 37 °C. Cells were used within two months after thawing. For cell death assay, we plated cells at a density of 1×104 cells/cm2 48 h prior to the addition of each material in 96-well plates. The cell death detection assay (LDH assay kit, Sigma Aldrich; St. Louis, MO) was performed 48 h after addition of material and analyzed with a plate reader (Power Scan 4, DS Pharma Biomedical; Osaka, Japan). In the evaluation of cellular uptake, cells were observed 48 h after exposure of CNTs by phase contrast microscopy (BZ-9000, Keyence; Osaka, Japan).
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6

Evaluating Zinc-Induced Cell Viability

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The cells were seeded at a density of 105 cells/ml in 96-well plates and treated with 50-90 µM ZnSO4 for 2 days as described previously38 (link). The alamarBlue reagent (AbD Serotec, Ltd., Oxford, UK) was added to the culture media and the cells were incubated for 4 h. Absorbance was determined at 570 and 600 nm using PowerScan 4 (DS Pharma Biomedical, Osaka, Japan).
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7

Quantifying Triglyceride Levels in 3T3-L1 Adipocytes

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3T3-L1 adipocytes (day 12) in the wells of cell
culture plates were
rinsed twice with PBS. Cell lysis buffer (1 M Tris-HCl pH7.5, 1 M
MgCl2, 10% Triton X100) was added to each well, and the
cells were harvested using a cell scraper into Eppendorf tubes. The
cells were disrupted using an ultrasonicator. Triglyceride and protein
contents of the cell lysates were measured. The triglyceride concentration
was determined using triglyceride E test kit (Wako) and the absorbance
at 595 nm was measured using a PowerScan4 plate reader (DS Pharma
Biomedical, Japan). Protein concentrations were determined using Bio-Rad
DC protein assay (Bio-Rad Laboratories, U.S.A.) reagents and the absorbance
at 595 nm was measured using the PowerScan4 plate reader. The triglyceride
content of each cell sample was normalized to its corresponding protein
content.
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8

Evaluating Apoptosis and ROS in Desmoplastic Fibroma

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The DF cells were seeded on a 96-well plate (5 × 103 cells/well) for 12 h in DMEM containing 10% FBS. Thereafter, the medium was replaced with a medium containing 10% FBS with DMSO or 5 µM of each drug (dissolved in DMSO), and the plate was incubated for 24 h. The drugs used in the analysis are: auranofin, felodipine that was the second most effective drug after auranofin, and meloxicam, which has been used for DF in our institution as an NSAID4 (link). The activity of Caspase 3/7, which is an indicator of the apoptosis-inducing ability, was measured using a Caspase assay kit (Caspase-Glo 3/7 Assay, Promega) at the 24 h time point, and the luminous intensity was measured using a microplate reader, PowerScan4 (DS Pharma Biomedical, Osaka, Japan).
Similarly, in the ROS assay, 2.5 × 104 T41A-mutated cells per well were seeded and incubated for 12 h, and then treated with a medium containing 10% FBS with DMSO or 1–10 µM of auranofin (dissolved in DMSO) for 24 h. The ROS Detection Assay Kit (BioVision, Waltham, MA) was used as described in its instructions, and fluorescence intensity was measured in the microplate reader.
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9

Zinc Homeostasis in DT40 Cells

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DT40 cells deficient in ZnT1, ZnT4, and metallothionein (MT) genes (Δ1M4 cells) were generated previously.16 (link) Wild-type DT40 cells and Δ1M4 cells were maintained in RPMI 1640 medium (Nacalai Tesque) supplemented with 10% heat inactivated fetal calf serum (Multiser, Trace Scientific Ltd.), 1% chicken serum (Invitrogen), and 50 μM 2-mercaptoethanol (Sigma-Aldrich) at 39.5°C, as described previously.16 (link) Δ1M4 cells were stably transfected with plasmid containing C-terminally HA-tagged WT or mutant ZnT2 using electroporation.55 (link) The transfected cells (105 cells/mL) were seeded in 96-well plates and treated with 20–70 µM ZnSO4 for 2 d. Alamar Blue reagent (AbD Serotec, Ltd.) was added to the culture media for 4 h, and absorbance was determined at 570 and 600 nm (PowerScan 4; DS Pharma Biomedical).
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10

Quantifying Intracellular and Extracellular PPIX

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The PPIX concentration was measured as described previously [16 (link)]. First, 100 µL of cell suspension (5 × 104 cells) were seeded into 96-well plates and cultured at 37 °C in the presence of 5% CO2 for 24 h. The culture media was replaced with fresh media containing 0, 1.25, 2.5, or 5 mM 5-ALA and the cells were incubated at 37 °C in the presence of 5% CO2. At 0 to 3 days post-treatment, the intracellular and extracellular PPIX concentrations were measured. The intracellular PPIX concentration was measured in cells treated with 100 µL of 1% sodium dodecyl sulfate after three times wash with PBS. The PPIX concentration in the cell supernatant was measured as the extracellular PPIX concentration. The fluorescence of each sample in a 100 µL was measured by POWERSCAN4 (DS Pharma Biomedical, Osaka, Japan) with emission wavelengths of 632 and 635 nm, after an excitation wavelength of 405 nm, to evaluate the intracellular and extracellular PPIX concentrations, respectively.
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