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Alexa fluor 488 goat anti rat igg

Manufactured by Abcam
Sourced in United States

Alexa Fluor 488 goat anti-rat IgG is a secondary antibody conjugated with the Alexa Fluor 488 fluorescent dye. It is designed to bind to and detect rat immunoglobulin G (IgG) primary antibodies in various immunoassay applications.

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12 protocols using alexa fluor 488 goat anti rat igg

1

Immunohistochemical Analysis of Cell Markers

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Immunohistochemical staining was performed as previously reported (Zhang et al., 2015). On day 7 or 21 following PCI, the brains were removed, and 5-µm frozen coronal sections were prepared. After antigen retrieval, sections were immunolabeled with rat monoclonal anti-BrdU (1:500; Accurate Chemical & Scientific), rabbit polyclonal anti-GFP (1:200; Santa Cruz Biotechnology), mouse monoclonal anti-NeuN (1:500; Chemicon), rabbit monoclonal anti-GFAP (1:200; Chemicon), mouse monoclonal anti-RIP (1:50; kind gift from Dr Xu XM, University of Louisville School of Medicine) and mouse monoclonal anti-NgR1 (1:200; Biogen Idec, Inc.) overnight at 4°C. After washing with PBS, the sections were incubated with goat anti-rabbit IgG Alexa Fluor 488, goat anti-rat IgG Alexa Fluor 488, goat anti-mouse IgG Alexa Fluor 594 and donkey anti-rabbit IgG Alexa Fluor 594 (1:1000; Abcam) at room temperature for 1 hour. Cells double-positive for BrdU/NeuN, GFP/GFAP and GFP/RIP were counted. Positive cells were also visualized using a motorized inverted microscope (IX81-ZDC2; Olympus, Hamburg, Germany).
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2

Immunofluorescent Staining of Microglia and Oligodendrocytes

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Tissue sections were blocked and permeabilized at room temperature for 1 h in 5% bovine serum albumin (Sigma), 0.05% Triton X-100 (Sigma), and 5% heat-inactivated donkey serum (Millipore) or goat serum (Millipore) for microglia or OPC/OL staining, respectively. Antibodies for microglia stains were 1:1,000 rabbit anti-IBA1 (Wako; Richmond, VA), 1:200 mouse anti-iNOS (Invitrogen; San Diego, CA), 1:50 goat anti-Arg1 (NovusBio; Littleton, CO), 1:500 donkey anti-rabbit IgG Alexafluor 546 (Invitrogen), 1:500 donkey anti-mouse IgG Alexa-Fluor 647 (Invitrogen), and 1:250 donkey anti-goat IgG Alexa-Fluor 488 (Jackson Labs). Antibodies for OPC/OL stains were 1:250 rabbit anti-Olig2 (NovusBio), 1:500 mouse anti-APC, clone CC1 (Millipore), 1:500 rat anti-PDGFRα (Invitrogen), 1:500 goat anti-rabbit IgG Alexa-Fluor 647 (Invitrogen), 1:1,000 goat anti-mouse IgG Alexa-Fluor 546 (Invitrogen), and 1:2,000 goat anti-rat IgG Alexa-Fluor 488 (Abcam; Cambridge, MA). Primary antibodies were incubated overnight at 4 °C and secondary antibodies were incubated for 2 h at room temperature. Nuclei were stained with 1:1,000 DAPI (Thermo Fisher Scientific; Waltham, MA) for 10 min at room temperature. Slides were mounted with Mowiol (Sigma), imaged with a Zeiss LSM 880 confocal microscope, acquired using Zen Black software, and analyzed on Bitplane IMARIS software (Concord, MA).
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3

Antibody Generation and Characterization

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The rabbit anti-UL21 polyclonal antibodies were generated for this study, and the rat anti-UL16 polyclonal antibodies were provided by He Qin [20 (link)]. The following monoclonal antibodies were used in this study: rabbit anti-GRP78 BiP (Abcam, UK), mouse anti-TGN46 (Abcam, UK), goat anti-rabbit IgG (Thermo Fisher Scientific, USA), rabbit anti-Myc tag (Beyotime, CHN), mouse anti-Flag tag (Transgen Biotech, CHN), Alexa Fluor 594 goat anti-rabbit IgG (Thermo Fisher Scientific, USA), Alexa Fluor 488 goat anti-mouse IgG (Thermo Fisher Scientific, USA), Alexa Fluor 488 goat anti-rat IgG (Abcam, UK), Alexa Fluor 594 goat anti-rabbit IgG (Life Technologies, USA), and mouse anti-β-actin (Beyotime, CHN). Normal rabbit IgG was obtained from Beyotime, and normal rat IgG was obtained from Thermo. The pCAGGS [40 (link)], pCMV-Myc [41 (link)], and pET-32c plasmids were provided by the Sichuan Agricultural University Avian Diseases Research Center.
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4

Triple-Staining for Neurogenesis Quantification

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A triple-staining procedure was implemented for BrdU/DCX/NeuN to allow analyzation through immunofluorescence. The brain sections were incubated overnight at 4°C with the following primary antibodies: rat anti-BrdU (1:200, ab6326, Abcam), mouse anti-NeuN (1:500, ab104224, Abcam) and rabbit anti-DCX (1:500, ab18723, Abcam). The sections were washed in PBS and incubated for 4 h with fluorescent secondary antibodies: Alexa Fluor 488 goat anti-rat IgG to reveal immunoreactivity of BrdU, Alexa Fluor 405 donkey anti-mouse IgG to reveal immunoreactivity of NeuN, and Alexa Fluor 594 goat anti-rabbit IgG to reveal immunoreactivity of DCX, respectively (1:400 for all three antibodies, Abcam). Every sixth coronal section from the adult dentate gyrus was used to assess BrdU+/NeuN+/DCX- and BrdU+/NeuN+/DCX+ positive cells in both hemispheres (10 sections per animal, 3 mice per group). BrdU+/NeuN+/DCX- and BrdU+/NeuN+/DCX+ positive cells were observed and counted under an Olympus BX63 microscope fitted with a ×10 eyepiece lens with a ×40 objective, and their percent distribution in the BrdU positive cells was calculated.
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5

Immunofluorescence Analysis of Lung Tissues

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Lung tissues were washed in PBS and fixed in 10% PBS-buffered formalin for 24 h. Tissues were then embedded in optimal cutting temperature compound, and 5–6 μm sections were cut by Microtome Cryostat (Leica CM3050S, Leica Biosystems), and stained with antibody according to the protocol provided by the manufacturer. Cells, cultured on the microscope cover glass, were washed in PBS and fixed in 10% PBS-buffered formalin for 15 min, and then stained with antibodies according to the protocol provided by the manufacturer. The sections were examined using a laser scanning confocal microscopy (Leica Biosystems). Primary antibodies (1 : 200) were applied as follows: Rat anti-mouse C3 (Abcam ab11862), Rabbit anti-C3 (Abcam ab200999), Rat anti-mouse Nestin (Abcam ab81462), Rat anti-mouse Ly6G (Abcam ab25377), Rabbit anti-human C3 (Abcam ab97462), Mouse monoclonal anti-human Nestin (Abcam ab22035), Rabbit anti-Histone H3-cit (Abcam ab5103), and Rabbit anti-Myeloperoxidase (Abcam ab208670). The following secondary antibodies (1 : 1000) were used: Alexa Fluor 488 Goat anti-Rat IgG (Abcam ab150157), Alexa Fluor 488 Goat anti-Rabbit IgG (Abcam ab150077), Alexa Fluor 555 Donkey anti-Rabbit IgG (Beyotime A0453), Alexa Fluor 647 Goat anti-mouse IgG (Beyotime A0473), and Alexa Fluor 594 Goat anti-Rat IgG (Abcam ab150160).
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6

MSC Immunophenotyping Protocol

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MSCs, cultured in the 12-well plate, were washed in PBS and fixed in 4% PFA for 10 min. After fixation the cells were with 5% normal serum and 0.05% Triton X-100 (Sigma-Aldrich) in PBS for 30 min at room temperature, followed by incubation with antibodies according to the protocol provided by the manufacturer. The cells were examined using a cell imaging microplate detection system-Cytation5 (BioTek) and a laser scanning confocal microscopy (Leica Biosystems). Primary antibodies (1:300) were applied as follows: Rat monoclonal anti-Nestin (Abcam ab81462), Rabbit monoclonal anti-Alpha smooth muscle actin (Abcam ab124964) and Rabbit monoclonal anti-to Cytokeratin 14 (Abcam ab181595). The following secondary antibodies (1:1000) were used: Alexa Fluor 488 Goat anti-Rat IgG (Abcam ab150157), Alexa Fluor 488 Goat anti-Rabbit IgG (Abcam ab150077). Nuclei were counterstained with Hoechst 33,342 (1:1000) (Invitrogen).
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7

Immunophenotyping of Mouse Immune Cells

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Fluorescein isothiocyanate (FITC)-, phycoerythrin (PE)- and allophycocyanin (APC)-conjugated specific antibodies against mouse CD11b (clone M1/70), Ly-6G (clone 1A8), NK1.1 (clone PK136) or CD3 epsilon (clone 145-2C11), an antibody against CD31 (clone MEC 13.3), and purified rat anti-mouse CD16/CD32 (Fc Block) were purchased from BD Biosciences (CA, USA). Antibody against interleukin-1β (IL-1β) (clone 11E5) was from Santa Cruz Biotechnology (CA, USA). Alexa Fluor 488 goat anti-rat IgG and Chromeo 546 goat anti-mouse IgG were obtained from Abcam (MA, USA). All other chemicals were of the highest grade available from commercial sources. Wild-type C. perfringens Strain 13 was used in this study.
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8

Immunofluorescence Analysis of Phospho-paxillin

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After treatment without or with κ-carrageenan (0.5 and 2 mg/mL) for 2 h, MC3T3-E1 pre-osteoblasts were fixed with 4% paraformaldehyde solution at 37 °C for 15 min, treated with 0.2% TritonX-100 (Sigma) for 15 min, and non-essentially bound substances blocked in 5% bovine serum albumin (BSA) for 30 min. Expression of phospho-paxillin (p-paxillin) was analyzed by immunofluorescence staining using rhodamine-phalloidin cytoskeleton dye (Invitrogen, Fisher Scientific, Carlsbad, CA, USA) and p-paxillin pTy31 polyclonal rabbit IgG (ab32084, Abcam, Cambridgeshire, UK). The secondary antibody used was Alexa Fluor-488 goat anti-rat IgG (Abcam). Nuclei were stained with 1 µg/mL DAPI (Sigma). After glycerol mounting, cell imaging was performed by laser scanning confocal microscopy (LSCM; Nikon, A1R/A1, Tokyo, Japan). Fluorescence microscopy was also used to visualize paxillin at 488 nm wavelength, and Image J software was used for paxillin quantification.
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9

Immunohistochemical Analysis of Hippocampal Glia

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Mice were deeply anesthetized with isoflurane and perfused intracardially with saline followed by paraformaldehyde fixation. Fixed brains were incubated in 30% sucrose in PBS at 4 °C for 48 h. Free-floating sections of the hippocampus (20 μm) were cut and blocked with 5% bovine serum albumin in PBS. The slices were then incubated with chicken polyclonal antiserum against GFAP (1:200, NBP-1-05198, NOVUS), rat monoclonal antiserum against C3 (1:50, NB200-540, NOVUS), rabbit polyclonal antiserum against IBA1 (1:500, 019-19741, Wako), or rat monoclonal antiserum against CD68 (1:50, MCA1957, BioRad) overnight at 4 °C. Secondary antibodies, Alexa Fluor 647 goat anti-chicken IgY, Alexa Fluor 594 goat anti- rabbit IgG, and Alexa Fluor 488 goat anti-rat IgG (Abcam, USA) were used at 1:1000 dilution. The slices were mounted in DAPI solution to label nuclei. Images were photographed using a Leica Dmi8 microscope with associated LAS-X software. The ImageJ (National Institutes of Health, USA) software is used to quantitate the fluorescence analysis.
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10

Quantifying SARS-CoV-2 Spike Binding

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Flow cytometry was used to detect the expression of hACE2 and the binding of SRBD fusion proteins with HEK293T-hACE2 cells. Briefly, HEK293T-hACE2 cells were incubated with anti-human ACE2 antibody for 2 h, HEK293T cells were used as a control. Serial dilutions of SRBD-mFc and 2xSRBD-mFc proteins were prepared in EP tubes, diluted fusion protein was incubated with HEK293T-hACE2 cells for 2 h, HEK293T cells were used as a control. The following secondary antibodies (1:1000) were used to detect hACE2 and mFc fusion proteins respectively, including: Alexa Fluor 488 Goat anti-Rat IgG (Abcam, ab175473) and Alexa Fluor 647 Goat anti-mouse IgG (Abcam, ab150115).
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