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2 protocols using ab236654

1

Western Blot Analysis of Gut Proteins

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Crypts were homogenized in T-PER Tissue Protein Extraction Reagent (Thermo Fisher Scientific) in the presence of a protease inhibitor cocktail (Nacalai Tesque) using a Nippi Biomasher (Nippi, Tokyo, Japan) for 1 h at 4 °C. Homogenized crypts were centrifuged at 20,000× g for 30 min to obtain supernatants. Protein concentrations in the supernatants were measured using a BCA protein assay kit (Thermo Fisher Scientific). Samples, including 10 mg of protein and 25 or 50 ng of mouse kidney lysate (positive control), were separated on an SDS-PAGE, following which proteins were transferred to nitrocellulose membranes. The membrane was blocked with StabilGuard (SurModics, Eden Prairie, MN, USA) for 1 h at 25 °C and then incubated at 4 °C overnight with 1 μg/mL anti-FFAR3/GPR41 (ab236654; Abcam, Cambridge, UK), anti-FFAR2/GPR43 (ABC299; Merck Millipore, Darmstadt, Germany), and anti-LAT2/Slc7a8 antibody (ab75610; Abcam) antibodies. After the membranes were washed, they were incubated for 1 h at 25 °C with goat anti-rat IgG-HRP (Imgenex, San Diego, CA, USA). After another wash, the proteins were detected using a chemiluminescent substrate (Chemi-Lumi One, Nacalai Tesque).
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2

Quantitative Histological Analysis of GPR41, CGRP, and F4/80 in Mouse Colon

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Immunohistochemistry and histology were performed according to the procedure described in previous reports [12 (link)]. Briefly, the excised distal colons were fixed with 4% paraformaldehyde for 24 h at 4 °C. The frozen sections (10 μm) for histology were then routinely stained with hematoxylin and eosin (H&E). The frozen sections (30 μm) for immunohistochemistry were exposed to a rabbit anti-human GPR41 antibody (ab236654, Abcam, Cambridge, MA, USA), goat anti-rat CGRP antibody (ab36001, Abcam) or rat anti-mouse F4/80 (MCA497GA, BioRad, Hercules, CA, USA) for 12–18 h and then incubated with the appropriate secondary antibodies for 2 h (Alexa 488 donkey anti-rabbit IgG), Cy3 donkey anti-rabbit IgG, Cy3 donkey anti-goat IgG or Alexa 488 donkey anti-rat IgG (Jackson ImmunoResearch Laboratories, West Grove, PA, USA). The immunostained sections were examined using a confocal microscope (LSM700 & LSM780, Carl Zeiss, Oberkochen, Germany). To avoid selection bias, three representative preparations were selected from each mouse colon and then three mucosal sites of each preparation were quantitatively analyzed using open-source software ImageJ (ImageJ bundled with 64-bit Java 1.8.0_172; a Java-based image processing program developed at the NIH) [13 ].
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