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45 protocols using can get signal solution 2

1

Western Blot Analysis of His-Tagged Proteins

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Cells were washed once in 50 mM Tris-HCl buffer (pH 8.0) and resuspended in the same buffer. The resuspended cells were sonicated, mixed with equal amount of SDS–polyacrylamide gel electrophoresis (SDS–PAGE) sample buffer and incubated at 95 °C for 5 min. An amount of 2.5 μg protein of each sample was loaded to 12% SDS–PAGE gels and transferred on a polyvinylidene difluoride membrane by electroblotting. The membrane was blocked with 2.5% (w/v) skim milk in TBS-T buffer (Tris-bufferd saline (pH 7.5) containing 0.05% Tween 20) for 1 h at room temperature. The membrane was washed twice with TBS-T buffer and incubation for 1 h with anti-His tag antibody (MBL, Japan) diluted 1:1,000 in Can Get Signal solution I (TOYOBO, Japan). After washing the membrane twice in TBS-T buffer, the membrane was incubated for 20 min with a secondary anti-mouse antibody conjugated with horseradish peroxidase (GE Healthcare, USA) at a dilution of 1: 5,000 in Can Get Signal solution II (TOYOBO, Japan). The membrane was washed twice in TBS-T buffer and exposed to the substrates in ImmunoSTARLD (Wako, Japan). Bands were visualized with a C-DiGit Blot Scanner (LI-COR, USA).
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2

Western Blot Analysis of Protein Extracts

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Total protein extracts were prepared by boiling the cells in 2 × SDS sample buffer for 10 min at 95 °C. The proteins were then resolved by 10% SDS-PAGE and transferred onto Immobilon-P PVDF membranes (Millipore). Western blotting was performed by incubating the membrane in Can Get Signal Solution I (TOYOBO) containing primary antibodies overnight at 4 °C. After three washes with Tris-buffered saline (TBS) containing 0.1% Tween 20, the membranes were incubated in Can Get Signal Solution II (TOYOBO) containing secondary antibodies [donkey anti-rabbit-horseradish peroxidase (AP182P; Millipore), Peroxidase AffiniPure Donkey Anti-Mouse IgG (715-035-150; Jackson immunoresearch), Peroxidase AffiniPure Donkey Anti-Goat IgG (705-035-147; Jackson immunoresearch) and Anti-DDDDK-tag mAb-HRP-DirecT (M185-7; MBL)] for 1 hour at room temperature (RT). Signals were detected on an AE-9300H-CP Ez-CaptureMG (ATTO) imaging analyzer using ECL Western Blotting Substrate (Promega) or Immunostar DL (WAKO). The primary antibodies used are listed in Supplementary Table S3.
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3

Immunoblotting Analysis of EMT Markers

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Total proteins were extracted from cells using 1.5 × SDS denaturing buffer. The protein extracts were separated by 10% SDS-PAGE and transferred onto a PVDF membrane (Millipore, USA). Immunoblotting was performed by incubating the membrane in Can Get Signal Solution I (TOYOBO, Japan) containing antibodies against E-cadherin (#5296, Cell Signaling Technology, USA), vimentin (sc-6260, Santa Cruz, USA), ZEB1 (#3396, Cell Signaling Technology), CD44 (#3570, Cell Signaling Technology), CD44v9 (CAC-LKG-M003, CosmoBio, Japan) and actin (sc-47778, Santa Cruz) for overnight at 4 °C. The membranes were incubated in Can Get Signal Solution II (TOYOBO) containing secondary antibodies conjugated with horseradish peroxidase for 1 hour at RT after three washes with TBS containing 0.1% Tween 20. Signals were detected on an AE-9300H-CP Ez-CaptureMG (ATTO, Japan) imaging analyser using ECL Western Blotting Substrate (Promega) or Immunostar DL (WAKO, Japan).
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4

Multimodal Imaging of Neuroinflammation and Amyloid

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After perfusion–fixation of mice under isoflurane inhalation, brains were extracted, and 20 µm thick frozen sections were prepared using a cryostat (Leica Biosystems, Wetzlar, Germany). The sections were permeabilized by washing three times for 5 min in phosphate-buffered saline (PBS) containing 0.3% TritonX-100 (PBST) and then blocked for 2 h at room temperature in PBST containing 1% BSA. The brain sections were then incubated overnight at 4 °C with rabbit anti-ionized calcium-binding adapter molecule-1 (Iba1) (Fujifilm Wako, Osaka, Japan) and mouse anti-glial fibrillary acidic protein (GFAP)-Cy3 (Sigma-Aldrich), diluted 1000- and 400-fold, respectively, in PBST containing 1% BSA. After washing with PBST three times, the sections were incubated in Can Get Signal Solution II (Toyobo, Osaka, Japan) containing Amylo-Glo (Biosensis, Thebarton, Australia), a fluorescent probe for Aβ plaque, and 500-fold-diluted goat-anti-rabbit-Cy5 (AnaSpec, Fremont, CA, USA) at room temperature for 2 h. Thereafter, the brain sections were washed three times for 5 min with PBST and sealed in VECTASHIELD Mounting Medium (Vector Laboratories, Newark, CA, USA). An all-in-one fluorescence microscope (BZ-X800; Keyence, Osaka, Japan) with BZ-X800 filter DAPI for Amylo-Glo, BZ-X800 filter green fluorescent protein for GFAP, and BZ-X800 filter Cy5 for Iba1 was used to detect signals.
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5

Quantitative Western Blot Analysis

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Western blots were performed with whole‐cell lysates. Antibodies against tubulin and HLA‐DR (Abcam PLC, Cambridge, UK) were used with a working dilution in Can Get Signal solution I (Toyobo, Tokyo, Japan), and secondary antibodies (anti‐rabbit IgG horseradish peroxidase from Cell Signaling, Danvers, MA, USA) were used at 1 : 2000 dilutions in Can Get Signal solution II (Toyobo). Signals were observed via ECL Western blotting Detection Reagents (GE Healthcare UK Ltd., Buckinghamshire, UK). The western blot images were captured using the Amersham Imager 600 (GE Healthcare UK Ltd.). Quantification (%) was calculated according to the following formula ‘[(band intensity of HLA‐DR)/ (band intensity of Tubulin bands)] × 100’ (%) by using imagej software (NIH, Bethesda, MD, USA).
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6

Western Blot Analysis of Autophagy

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Primary antibodies against LC3 (MBL) or GAPDH (Trevigen, MD, USA) were suspended with Can Get Signal solution 1 at 1:2,500 or 1:10,000, respectively. The membranes were then washed and incubated with horseradish peroxidase-conjugated anti-mouse or -rabbit IgG (Amersham Biosciences, Buckinghamshire, UK) suspended with Can Get Signal solution 2 (Toyobo) at 1:10,000. Protein bands were detected by enhanced chemiluminescence and imaged with an LAS 4000 Lumino image analyzer (Fujifilm, Tokyo, Japan). siRNA targeting Atg5 and negative control siRNA were purchased from Cell Signaling Technology (Danvers, MS, USA). Cells were grown to ~60% confluence in a 6-well plate and then incubated with a transfection mixture containing LipoTrust Ex Oligo (Hokkaido System Science Co., Ltd., Hokkaido, Japan) and 50 nmol siRNA for 40 h. Primary antibodies against Atg5 (Cell Signaling Technology), and GAPDH were suspended with Can Get Signal solution 1 at 1:2,500 and 1:10,000, respectively.
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7

GRPR Western Blotting Protocol

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Western blotting was conducted according to our previously described methods (Takanami et al., 2016 (link)). Membranes were blocked with the PVDF blocking reagent from the Can Get Signal kit (Toyobo) for 30 min at room temperature and then incubated overnight at 4°C in Can Get Signal Solution 1 (Toyobo) containing a 1:1,000 dilution of rabbit polyclonal antibody against human GRPR (GTX100015, GeneTex). Blotted membranes were washed three times with 0.05% Tween 20 in Tris-HCI buffered saline (TBST) and incubated with HRP-conjugated goat polyclonal antibody against rabbit IgG (Bio-Rad Laboratories) at a 1:10,000 dilution in Can Get Signal Solution 2 (Toyobo) for 1 h at room temperature. After washing five times with TBST, blots were visualized by the Immun-Star WesternC Chemiluminescence Kit (Bio-Rad Laboratories). Images of blots were detected by ChemiDoc XRS+ System with Image Lab Software (Bio-Rad Laboratories) and adjusted slightly for brightness and contrast to provide a uniform background.
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8

Aβ Protein Analysis in Mouse Brain

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On feeding day 58, the mouse brain cortex was homogenized with M-PER (Thermo Fisher Scientific, Waltham, MA, USA) containing 1 × Halt protease and phosphatase inhibitor cocktail (Thermo Fisher Scientific). Samples were mixed with NuPAGE lithium dodecyl sulfate sample buffer (Thermo Fisher Scientific) containing 5% 2-mercaptoethanol (Wako, Osaka, Japan) at 75 °C for 5 min and loaded onto a 14% sodium dodecyl sulfate polyacrylamide gel (SDS–PAGE) (50 µg/lane). After electrophoresis, proteins in the gel were transferred to a nitrocellulose membrane (Bio-Rad, Hercules, CA, USA). After blocking with 0.1% T-TBS containing 5% skim milk (Wako) at room temperature, the membrane was incubated with a mouse monoclonal anti-Aβ antibody (1:1000, clone 6E10, BioLegend, San Diego, CA, USA) or mouse monoclonal anti-GAPDH (1:10000, clone 5A12, Wako) in Can Get Signal solution 1 (Toyobo, Osaka, Japan) overnight at 4 °C. After washing with 0.1% T-TBS, the membrane was incubated with a horseradish peroxidase-conjugated secondary antibody against mouse IgG (1:2000; Cat. No. sc-2005, Santa Cruz) in Can Get Signal Solution 2 (Toyobo) for 2 h at room temperature. After washing, chemiluminescence on the membrane was detected by ECL Prime Western Blotting Detection Reagent (GE Healthcare, Chicago, IL, USA) using an ImageQuant LAS 4000 system (GE Healthcare).
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9

GRPR Western Blotting Protocol

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Western blotting was conducted according to our previously described methods (Takanami et al., 2016 (link)). Membranes were blocked with the PVDF blocking reagent from the Can Get Signal kit (Toyobo) for 30 min at room temperature and then incubated overnight at 4°C in Can Get Signal Solution 1 (Toyobo) containing a 1:1,000 dilution of rabbit polyclonal antibody against human GRPR (GTX100015, GeneTex). Blotted membranes were washed three times with 0.05% Tween 20 in Tris-HCI buffered saline (TBST) and incubated with HRP-conjugated goat polyclonal antibody against rabbit IgG (Bio-Rad Laboratories) at a 1:10,000 dilution in Can Get Signal Solution 2 (Toyobo) for 1 h at room temperature. After washing five times with TBST, blots were visualized by the Immun-Star WesternC Chemiluminescence Kit (Bio-Rad Laboratories). Images of blots were detected by ChemiDoc XRS+ System with Image Lab Software (Bio-Rad Laboratories) and adjusted slightly for brightness and contrast to provide a uniform background.
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10

Immunoblotting Analysis of Cell Lysates

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Cell lysates of all five cell lines were prepared in lysis buffer containing 50 mM Tris-HCL, 150 mM NaCl, 5 mM EDTA, 0.5% TritonX-100, 0.05% sodium dodecyl sulfate (SDS), 0.5% sodium deoxycholate, 2 mM phenylmethylsulfonyl fluoride and 1 mM Na3VO4. The lysates were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and immunoblotting analysis was performed as previously described [20 (link)].
Membranes were incubated with a 1:1000 dilution of primary antibodies in Can Get Signal solution 1 (TOYOBO, Osaka, Japan), followed by corresponding secondary antibodies (1:1000 dilution with Can Get Signal solution 2). Primary antibodies were obtained from Cell Signaling Technology (cleaved-PARP (cPARP), p21, acetyl-H4 (Lys12), E-cadherin; Danvers, MA, USA), Sigma-Aldrich (α-tubulin, acetyl-α-tubulin (Lys40); St. Louis, Mo, USA), Horse-radish peroxidase-conjugated mouse and rabbit antibodies were from GE Healthcare Life Sciences (Piscataway, NJ).
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