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35 protocols using sephadex g 75

1

Extraction and Characterization of O. fimbriata Polysaccharides

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Fresh O. fimbriata plants were collected from Yantai, Shandong Province, China. DMEM, fetal bovine serum (FBS), and PBS were obtained from Hyclone (Gibco, NY, USA). Sephadex G-75, lipopolysaccharide (LPS), Griess reagent, and different molecular weight dextrans (5, 11.6, 23.8, 48.6, 80.9, 148, 273, 409.8, and 667.8 kDa) were purchased from Sigma-Aldrich (St. Louis, MO, USA). DEAE-cellulose 52, dialysis bags, and monosaccharide standards (Fuc, GalN, Rha, Ara, GlcN, Gal, Glc, GlcNAc, Xyl, Man, Fru, Rib, GalA, GulA, GlcA, and ManA) were obtained from the Shanghai Yuanye Bio-Technology Co (China). Enzyme-linked immunosorbent assay (ELISA) kits for IL-1β and IL-6 were obtained from Meimian Biological Technology Co., Ltd. (Yancheng, Jiangsu, China). Other chemical reagents were of analytical grade and purchased from Sinopharm Chemical Reagent Co., Ltd. (Shanghai, China).
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2

Reconstitution and Analysis of Hhat-Containing Liposomes

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Lipids, resuspended in chloroform, were mixed in ratios of 50% PC, 30% PE, 10% PI, 10% PS and dried under nitrogen gas. Liposomes were formed by reconstituting phospholipids (10mg of phospholipids dried from 100 μl chloroform) with either wild-type or mutant Hhat in 20 mM HEPES (pH 7.3, 350 mM NaCl, 1% octylglucoside, 1% glycerol) prior to passing through a Bio-Beads SM-2 Adsorbents detergent removal column (Bio-Rad) ten times. Liposomes were then extruded 30 times through a polycarbonate filter with 0.2 μm pore size and subsequently passed through a Econo-Column® Chromatography Column, 0.5 × 5 cm (Bio-Rad) containing Sephadex® G-75 (Sigma). Six, 1ml fractions were collected, aliquoted, and stored at −80°C. Analysis of Hhat orientation in liposomes was performed as described (Matevossian and Resh, 2015a (link)).
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3

Lipid Composition Analysis Protocol

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Tween 20, cholesterol, CHEMS, Sephadex G75, HEPES salt (N-(2-idroxyethyl) piperazine-N-(2-ethanesulfonic acid)), zymosan A, formalin, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) salt, and Trypan blue were purchased from Sigma-Aldrich SRL (Milan, Italy). Fetal bovine serum, 0.1% trypsin/0.02% ethylenediamine tetraacetic acid, phosphate-buffered saline, and Dulbecco’s Modified Eagle’s Medium were purchased from Gibco® Cell Culture Basics (Life Technology Italia, Monza, Italy). Diphenylhexatriene was obtained from Acros Organics BVBA (Geel, Belgium). The AG was a kind gift from Bernett (Pavia, Italy). The cellulose membrane dialysis tubing was purchased from Spectrum Laboratories (Prodotti Gianni SpA, Milan, Italy). Cellulose filters (0.45 μm) were obtained from Millipore (Billerica, MA, USA). Tissue culture test plates were purchased from TPP Tissue Cell Culture Products (Delchimica Scientific Glassware, Naples, Italy). Male CD-1 mice were purchased from Harlan Laboratories (Correzzana, Italy). All other chemicals used during the experiments were of analytical grade and no additional purification was carried out before analysis. Double-distilled water was used throughout the study.
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4

Reconstitution and Analysis of Hhat-Containing Liposomes

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Lipids, resuspended in chloroform, were mixed in ratios of 50% PC, 30% PE, 10% PI, 10% PS and dried under nitrogen gas. Liposomes were formed by reconstituting phospholipids (10mg of phospholipids dried from 100 μl chloroform) with either wild-type or mutant Hhat in 20 mM HEPES (pH 7.3, 350 mM NaCl, 1% octylglucoside, 1% glycerol) prior to passing through a Bio-Beads SM-2 Adsorbents detergent removal column (Bio-Rad) ten times. Liposomes were then extruded 30 times through a polycarbonate filter with 0.2 μm pore size and subsequently passed through a Econo-Column® Chromatography Column, 0.5 × 5 cm (Bio-Rad) containing Sephadex® G-75 (Sigma). Six, 1ml fractions were collected, aliquoted, and stored at −80°C. Analysis of Hhat orientation in liposomes was performed as described (Matevossian and Resh, 2015a (link)).
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5

Encapsulation and Purification of Pyranine-Loaded Liposomes

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The ratiometric pH-sensitive fluorophore pyranine (from Molecular Probes, Eugene, OR) was prepared at a concentration of 10 mM in milli-Q water. pyranine (final concentration of 300 μM) was mixed with the stocked liposomes (4 mg of lipid) and 100 mM KPi (pH 7.0) in a total volume of 1 mL. pyranine was encapsulated in the liposomes by three freeze-and-thaw cycles at 30°C (65°C for mixtures containing DPPE, DPPC, and DPPG lipids). The osmolality of the liposome lumen is ∼190 mosmol/kg. This value equals the osmolality of the assay buffer (100 mM KPi (pH 7.0)). After extrusion through a 200 nm polycarbonate filter at room temperature (65°C for mixtures containing DPPE, DPPC, and DPPG lipids) to homogenize the vesicles, the liposomes were eluted through a 22-cm-long Sephadex-G75 (Sigma-Aldrich) column pre-equilibrated with the assay buffer to remove the external pyranine. For blank correction, empty liposomes were prepared using the same procedure without the addition of pyranine. The collected 1 mL fractions containing the liposomes were identified using either an ultraviolet lamp (for liposomes filled with pyranine) or a NanoDrop spectrophotometer (for empty liposomes) and diluted in a total volume of 12 mL of the assay buffer.
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6

Purification of His-Tagged Proteins

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E. coli Rosetta(DE3)pLysS cells were from Novagen (Rome, Italy); ECL plus, Hybond ECL membranes were from GE Healthcare; l-[3H]Arg was from Perkin Elmer (Waltham, MA, USA); conjugated anti-His6 antibody, TX-100, Amberlite XAD-4, egg yolk phospholipids (3-sn-phosphatidylcholine from egg yolk), Sephadex G-75, His-Select resin, l-Arg and all the other reagents were from Sigma-Aldrich (Saint Louis, MO, USA).
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7

Detailed Enzyme Purification Protocols

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All the reagents used in enzyme purification were procured from HiMedia Laboratories except the matries for column chromatography viz Sephadex G-75 and DEAE-Sepharose which were obtained from Sigma-Aldrich (St. Louis, MO, USA). Flavonoid and isoflavonoid standards daidzein, daidzin, genistin, genistein, hesperidin, hesperetin, naringin, naringenin, rutin hydrate and quercetin used were also obtained from Sigma-Aldrich, while the solvents hexane, toluene, chloroform, ethyl acetate, methanol, acetone, formic acid and glacial acetic acid (AR grade), from HiMedia. The TLC plates (precoated with aluminum-backed silica gel 60 F254) were procured from Merck (Darmstadt, Germany).
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8

Recombinant Enzyme Production and Purification

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The following materials were used: BL21 pLysS (DE3) strain (Novagen, Cat. No.: 69451–3, Darmstadt, Germany), pAED4 (BV Tech, Sofia, Bulgaria), isopropyl β-d-1-thiogalactopyranoside or IPTG (Sigma-Aldrich Cat. No.: I6758, St. Louis, MO, USA), Luria Bertani broth or LB broth (Merck, Cat. No.: 1.10285.0500, Whitehouse Station, NJ, USA), diethylaminoethyl (DEAE)-Sepharose Fast Flow (Amersham, Cat. No.: 17-0709-01, Amersham, UK), Sephadex G-75 (Sigma-Aldrich, Cat. No.: G7550), l-asparagine (Sigma-Aldrich, Cat. No.: A0884), Nessler's reagent (Sigma-Aldrich, Cat. No.: 72190), and CS (low molecular weight (% deacetylation 75% to 85%, viscosity 20 to 300 cP, average MW ~ 50 kDa), Sigma-Aldrich; Cat. No.: 448869), sodium tripolyphosphate (Sigma-Aldrich, Cat. No.: 238503).
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9

Lipid-Based Nanoparticle Formulation

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1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[methoxy (polyethylene glycol)-2000] ammonium salt (DSPE-m-PEG2000 or 18:0PEG2000PE), and cholesterol were bought from Avanti Polar Lipids LLC (Alabaster, AL, USA), L-α-Phosphatidylethanolamine (PE) from egg yolk was purchased as a lyophilized powder from Sigma Aldrich (St. Louis, MO, USA). All lipids purchased were used without further purification. SN-38 in powder was purchased from Fisher Scientific (Waltham, MA, USA) and its stock solution was prepared in dimethyl sulfoxide (DMSO; 10 mg/mL). Reagents such as methanol and chloroform were purchased from Fisher Scientific and used as provided. Sephadex G-75 and carboxyfluorescein were purchased from Sigma Aldrich (St. Louis, MO, USA). Indocyanine green (ICG) was purchased from Fisher Scientific (Waltham, MA, USA). Vivotrack 680 was purchased from PerkinElmer (Hopkinton, MA, USA).
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10

Liposomal Delivery of Pentamidine

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HEPES salt (Sodium 2-(4-(2-hydroxyethyl)piperazin-1-yl)ethanesulfonate), cholesterol, dicetyl phosphate (DCP), Sephadex G75, pentamidine isethionate, pyrene, 1,6-diphenyl-1,3,5-hexatriene (DPH), mucin from porcine stomach type II powder, Tween 20 (polysorbate 20), chitosan medium molecular weight powder, and sodium hydroxide were purchased from Sigma-Aldrich (Milan, Italy). l-Glutamic acid was supplied by PanReac Applichem (Milan, Italy). All other products and reagents were of analytical grade.
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