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15 protocols using coulter multisizer 3

1

Synthesis and Characterization of AuNDs

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AuNDs were synthesized using an emulsion method, and AuMBs were synthesized as described previously7 . The synthesis of AuNDs involved premixing AuNRs with an absorption peak at 808 nm and ice-cold liquid C5F12 with a low boiling point of 29 °C in 20% HSA (Octapharma, Switzerland) in a glass bottle, and then exposing the mixture to ultrasound by a digital sonicator with a cup-horn sonotrode (Branson, USA). The solution was exposed to three cycles of 5-minute sonication at room temperature followed by 5 minutes of rest on ice. After centrifugation at 1800 rpm for 3 minutes twice, AuNDs with diameters of 300 ~ 500 nm were isolated. The size of the AuNDs was accurately measured using two devices: a Coulter MultiSizer III (Beckman Coulter, USA) and a Zetasizer Nano ZS (Malvern Instruments, UK).
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2

Synthesis and Characterization of AuNDs

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The main components of AuNDs were gold nanorods (AuNRs), with longitudinal plasmon resonance wavelength at 808 nm, PFP (C5F12), and 20% human serum albumin solution (Octapharma AG, Lachen, Switzerland). The AuNDs were synthesized as reported in our previous work [26 (link)]. In brief, the three components were mixed in 1 mL of phosphate-buffered saline (PBS, purchased from Gibco, Thermo Fisher Scientific, Waltham, MA, USA) followed by sonication using a digital sonifier (Branson, Danbury, CT, USA) with a cup-horn sonotrode (Branson, Danbury, CT, USA). After 4 cycles of 5-min sonication and 5-min rest on ice, the droplet emulsions were formed. The sedimentary droplet emulsions were then resuspended in 1 mL of PBS and then centrifuged at 1700 rpm for 3 min for three times at 4 °C to isolate the nano-sized droplets. After centrifugation, the supernatant was further analyzed by using Coulter MultiSizer III (Beckman-Coulter, Hamburg, Germany) and Zetasizer (Nano Z, Worcestershire, UK) to count the number of the droplets and measure the size distribution, respectively. AuNDs with a size ranged from 200 to 500 nm were then applied for the following experiments.
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3

Adipocyte Size Distribution Analysis

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At the end of Experiment 1, distribution of the adipocyte size in Experiment 1 was determined as described [14 (link)]. Briefly, adipocytes isolated from epididymal and subcutaneous WAT were fixed with 2 % osmium tetroxide and passed through a 250-μm nylon filter to remove the fibrous tissue. The cells were then washed extensively with isotonic saline. Ten thousand cells were analyzed using the Coulter Multisizer III (Beckman Coulter, High Wycombe, England).
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4

AuMB Production via Emulsion Sonication

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AuMBs were produced using the following emulsion method: a sonicator (Model 102C, Branson, Danbury, CT, USA) was used to sonicate a premixed solution—which contained 4% (w/v) HSA (human serum albumin, Octapharma, Vienna, Austria), 6 nM AuNPs, phosphate-buffered saline (PBS), and C3F8 gas—for 3 min followed by resting on ice for 5 min. Centrifugation was then performed at 1100 rpm for 3 min. The concentration and size distribution of the AuMBs were measured by a cell counter/analyzer using a 30-µm aperture (Coulter MultiSizer III, Beckman Coulter, Brea, CA, USA). AuMBs with a mean size of 1–3 µm were selected by varying the centrifugation parameters.
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5

Measurement of Nascent Particle Size

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The size distributions of nascent particles (wet particles before lyophilizing) were determined using a Coulter Multisizer III (Beckman Coulter Inc.) with a 200 μm aperture in Isoton II. More than 5,000 particles were measured for each sample.
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6

Cellular Proliferation Assay Protocol

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To assess proliferation, cells were seeded at 4.2 × 105 cells/mL in 24-well plates. Following 24 h, the media were replaced with fresh RPMI + 5% FCS, in the presence or absence of treatments and a selection of wells counted (day 0 counts). Cells were subsequently counted each day up to 7 days to assess proliferation. Briefly, this entailed the removal of old media and the addition of trypsin/EDTA in order to lift cells before passing gently through a 25 G needle to achieve a single-cell suspension. The resulting solution was then added to isoton in a counting cup and the cell number was determined using a Coulter Multisizer III (Beckman Coulter Life Sciences, Indianopolis, IN, USA) Each well was counted twice with all conditions performed in triplicate.
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7

Perfluorobutane Microbubbles for siRNA Delivery

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Perfluorobutane gas-filled lipid MBs carrying either Silencer Select siRNA (Ambion) against luciferase or a negative control sequence were prepared as previously described [16 (link), 17 (link)]. Briefly, chloroform solutions of 1,2-distearoyl-sn-glycero-3-phosphocholine, 1,2-distearoyl-sn-glycero-3-ethylphosphocholine, 1,2-distearoyl-sn-glycero-3-phosphoglycerol (Avanti Lipids), and polyethylene glycol-40 stearate (Sigma) at a mole ratio 100:43:1:4.5 were dried with argon gas. An aqueous micellar solution of lipid was then prepared by adding phosphate buffered saline (PBS) containing 1 mmol/L EDTA and the solution was sonicated (Misonix) to disperse lipids. The resulting lipid solution was diluted 1:4 in PBS/EDTA, and 8 μg of Silencer Select siRNA against luciferase or a negative control sequence was added. The solution was placed in a sealed glass vial and the head space was filled with perfluorobutane gas (FlouroMed), followed by amalgamation (Bristol Myers-Squibb) to form perfluorobutane gas-filled MBs [17 (link)]. The resulting siRNA-loaded MB solution contained approximately 7×108 MB/mL with a mean diameter of 2.1±1.1 μm as measured by a Coulter Multisizer 3 (Beckman Coulter).
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8

Adipocyte Morphometry Protocol

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Subcutaneous and visceral adipose tissue samples were fixed in 2% osmium tetroxide and shaken at 37°C for 7 days. The fixed tissues were filtered through a 250-μm and 25-μm mesh to obtain a single cell suspension. The diameter and distribution of adipocytes were measured using a Coulter Multisizer 3 particle counter (Beckman Coulter, Inc., Brea, CA, USA).
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9

Floral Morphology and Pollen Quantification

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For each taxon, we averaged the number of stamens and ovules per ovary after dissecting one floral bud from 5 to 21 individual plants under a dissecting microscope totaling 59 flower buds (Table 3). For each sample, we also estimated the number of pollen grains per anther by squashing one anther randomly selected on a slide containing Isoton II (Beckman Coulter, Fullerton, CA) and counting the number of pollen grains contained in aliquots of 500 μl using a particle counter (Coulter Multisizer 3, Beckman Coulter). Pollen production per flower was estimated as the number of pollen grains per anther (mean value of three aliquots) multiplied by the number of anthers in the flower; then, we computed the pollen‐to‐ovule (P/O) ratios accordingly (Cruden, 1977). We also dissected 1–3 recently‐opened flowers from 7 to 10 individual plants per taxon to measure: (a) length of petals, (b) height of the tallest anther, (c) height of the ovary, and (d) height of the stigma; then, we computed the stigma‐anther separation (i.e., herkogamy) by subtracting the height of the tallest anther from the height of the stigma (ovary size plus style length). Stigma‐anther separation has positive values when stamens do not reach the stigma height (i.e., approach herkogamy) and negative values when the stigma is below the anthers (i.e., reverse herkogamy).
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10

Preparation and Characterization of Targestar-P Microbubbles

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Targestar®-P (Targeson; San Diego, CA) was used in all studies. Targestar-P (TS-P) is a lipid encapsulated decafluorobutane (C4F10) microbubble (MB), and is commercially available for use as an imaging agent in life science research. Targestar-P is a polydisperse formulation, containing MB of diameter between 1 and 8 um. An “up-sized” preparation of Targestar-P was prepared by differential centrifugation, as in Shekhar et al (18). Following centrifugation, MB were packaged in depyrogenated glass vials under a headspace of decafluorobutane and stored at 4-8°C. MB size distribution and concentration was assessed by electrozone sensing, using a Coulter Multisizer 3 (Beckman Coulter, Fullerton, CA, USA), which measures MB in the range 0.6–18 μm.
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