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4 protocols using heat inactivated fetal bovine serum

1

Cell Culture Conditions for Multiple Cell Lines

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HepG2 cells (RIKEN RBC) and A549 cells (JCRB) were cultured in Dulbecco's modified Eagle medium (WAKO). K562 cells (JCRB) and KHYG-1 cells (JCRB) were cultured in RPMI1640 medium (Wako). Both media contained 10% heat-inactivated fetal bovine serum (Biosera), 100 U/ml penicillin and 100 μg/ml streptomycin (Nacalai). KHYG-1 cells were maintained in the presence of 100 IU/mL human recombinant IL-2 (Wako).
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2

Cell Line Authentication and Cultivation

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Cell lines were obtained from the Institute of Cytology (Russian Academy of Sciences). MCF7, BT20, MDAMB231, and MDAMB453 are widely used BC tissue-derived cell lines. The HBL-100 line was obtained from primary cultures of cells derived from an early lactation sample of human milk[23 (link)]; however, following studies revealed the presence of Y chromosome and malignant characteristics of these cells[24 (link),25 (link)]. Small tandem repeat (STR) profiling was performed as a commercial service (InLab-genetics.ru) to confirm the identity of all used cell cultures [Supplementary Appendix 1-5]. All cell lines were cultured in RPMI 1,640 medium (PanEco, Moscow, RF) supplemented with 10% heat-inactivated fetal bovine serum (Biosera, Nuaille, France) and 1% penicillin-streptomycin (PanEco, Moscow, RF) at standard conditions.
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3

Culturing HeLa, Ca Ski, and HT29 Cell Lines

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HeLa TI is a polyclonal population of the HeLa cell line (the epidermoid carcinoma of the cervix) carrying a genome-generated vector based on the avian sarcoma virus and driven by an epigenetically repressed GFP gene; Ca Ski is a cell culture of the epidermoid carcinoma of the cervix with a higher level of DNA methylation than HeLa cells [23 (link)]. The HT29 cell line comprises colorectal adenocarcinoma cells. HeLa TI, Ca Ski, and HT29 cells were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM) supplemented with 4.5 g/liter glucose (PanEco, Moscow, Russia), 10% (v/v) heat-inactivated fetal bovine serum (Biosera, Cholet, France), antibiotic cocktail containing penicillin (50 units/mL) and streptomycin (50 µg/mL) (PanEco, Moscow, Russia), and 2 mM L-glutamine (PanEco, Moscow, Russia). The cells were cultured under standard conditions (37 °C, 5% CO2). The cells were obtained from the nitrogen bank of Blokhin National Medical Research Center of Oncology.
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4

Influenza A virus propagation in MDCK cells

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MDCK cells (CCL-34) were obtained from the American Type Culture Collection (Manassas, VA, USA) and maintained in minimum essential medium (Sigma-Aldrich Co. LLC) supplemented with 5% (v/v) heat-inactivated fetal bovine serum (Biosera, Kansas, MO, USA) and 50 μg/mL gentamicin sulfate solution (Fujifilm Wako Pure Chemical Corporation). Influenza A virus (IAV) strain A/Puerto Rico/8/1934 (H1N1; VR-1469) was obtained from the American Type Culture Collection. IAV was propagated at 37 °C using MDCK cells in serum-free medium (SFM; Thermo Fisher Scientific Japan K.K., Kanagawa, Japan) supplemented with acetylated trypsin (2 μg/mL) (Sigma-Aldrich Co. LLC) and gentamicin sulfate solution (50 μg/mL). The virus pellets were obtained according to some previous reports with minor modifications [11 (link),12 (link),13 (link)]. Briefly, the culture medium containing the propagated virus was centrifuged at 300× g for 5 min, the supernatant was then centrifuged at 13,000× g for 2 h, and the supernatant after centrifugation was discarded; the pellet was then re-suspended, and the solution was collected as a condensed viral solution.
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