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C16 ceramide

Manufactured by Merck Group

C16-ceramide is a synthetic lipid compound that is commonly used in laboratory research. It is a type of ceramide, which are important structural components of cell membranes. C16-ceramide can be utilized in various experimental applications, such as the study of cellular signaling pathways and lipid metabolism.

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4 protocols using c16 ceramide

1

Metabolomic Analysis of Cell Lines

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FBS, penicillin, and streptomycin were purchased from HyClone Laboratories. RPMI 1640 medium and charcoal-stripped FBS were purchased from Thermo Fisher. Dialyzed FBS was from Life Technologies. Optima ammonium acetate, ammonium hydroxide, Optima liquid chromatography–mass spectrometry (LC-MS) grade, acetonitrile, methanol, and water were purchased from Fisher Scientific. U-13C glucose, U-13C glutamine, and 2,3,3-2H serine were obtained from Cambridge Isotope Laboratories. U-13C palmitate, C16-ceramide, and C2-ceramide were purchased from Sigma-Aldrich.
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2

Liposome-Nanoparticle Composite Preparation

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l-α-Phosphatidic acid sodium salt (≥98%), l-α-phosphatidylcholine (≥99%), and C16-ceramide (shown
as Figure 1) were purchased
from Sigma-Aldrich. Three kinds of liposomes were prepared: (1) 80
mol % phosphatidylcholine and 20 mol % phosphatidic acid, (2) 100
mol % ceramide, and (3) 80 mol % phosphatidylcholine, 10 mol % ceramide,
and 10 mol % phosphatidic acid. They are referred to as PA/PC, CER
and PA/PC/CER, respectively.
The liposome–nanoparticle composites are
prepared by the
thin layer hydration method as described previously.15 (link) Briefly, a single lipid or several lipids are dissolved
in a 1:1 (v:v) mixture of methanol and chloroform in a total concentration
of 2 mM. After evaporation of the solvents under a nitrogen stream,
the dry lipid film is rehydrated by the citrate-stabilized gold nanoparticle
solution, allowing liposomes to form. The solution is frozen in liquid
nitrogen and thawed at 37 °C several times. The lipid–nanoparticle
suspensions are then extruded through a polycarbonate membrane with
a pore size of 200 nm.
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3

Metabolomic Analysis of Cell Lines

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FBS, penicillin, and streptomycin were purchased from HyClone Laboratories. RPMI 1640 medium and charcoal-stripped FBS were purchased from Thermo Fisher. Dialyzed FBS was from Life Technologies. Optima ammonium acetate, ammonium hydroxide, Optima liquid chromatography–mass spectrometry (LC-MS) grade, acetonitrile, methanol, and water were purchased from Fisher Scientific. U-13C glucose, U-13C glutamine, and 2,3,3-2H serine were obtained from Cambridge Isotope Laboratories. U-13C palmitate, C16-ceramide, and C2-ceramide were purchased from Sigma-Aldrich.
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4

Lipid Binding Assay for Pore-Forming Toxin

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The analysis was performed essentially as described earlier [33 (link)] with modifications. The following lipids were used: semisynthetic bovine brain sphingomyelin (SM), C16-ceramide, cholesterol, dioleoylphosphatidylcholine (DOPC), dipalmitoylphosphatidylcholine (DPPC) and dipalmitoylphosphatidylethanolamine (DPPE) (all from Sigma). The lipids were dissolved in chloroform:methanol:H2O (1:1:0.3) and 1 μl of the solution containing 25–500 pmoles of lipid was spotted onto a 0.45-μm nitrocellulose membrane. The membrane was pressed with a hot block at 60°C for 5 s according to Taki and Ishikawa [34 (link)], blocked with 1% gelatin and 1% polyvinylpyrrolidone and incubated for 45 min at 20°C with 1 μg/ml GST-PFO in PBS buffer containing 0.03% Tween-20. After washing, the membrane was exposed for 45 min to chicken anti-GST IgY-peroxidase (Rockland). Immunoreactive spots were visualized with the SuperSignal West Pico chemiluminescence substrate (Pierce).
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