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7 protocols using cellulase

1

Immunofluorescent Analyses of Bryophyte Sporophytes

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Sporophytes were hand-dissected from archegoniophores and placed in 1x PBS with 0.1% Triton-X 100 (PBST) and 4% paraformaldehyde on ice. Samples were fixed by applying a vacuum for 15min followed by 45min at 4ºC. Samples were washed thrice for 10min each with PBST at 4ºC with gentle shaking. Cell walls were digested by incubating samples in PBST plus 1% cellulase (Duchefa Biochemie) at 37ºC for 10min in a damp chamber.
Samples were washed thrice for 10min each with PBST at 4ºC with gentle shaking. Intact tissues were placed in 10µL PBST on a glass slide and squashed with a cover slip. Slides were dipped in liquid nitrogen and the cover slip was removed with a razor blade.
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2

Isolation and Squashing of Bryophyte Sporophytes

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Sporophytes were hand-dissected from archegoniophores and placed in 1x PBS with 0.1% Triton X-100 (PBST) and 4% PFA on ice. Samples were fixed by applying a vacuum for 15 min followed by 45 min at 4°C. Samples were washed thrice for 10 min each with PBST at 4°C with gentle shaking. Cell walls were digested by incubating samples in PBST plus 1% cellulase (Duchefa Biochemie) at 37°C for 10 min in a damp chamber. Samples were washed thrice for 10 min each with PBST at 4°C with gentle shaking. Intact tissues were placed in 10 µL PBST on a glass slide and squashed with a cover slip. Slides were dipped in liquid nitrogen and the cover slip was removed with a razor blade.
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3

Enzyme-based Tissue Dissociation

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The enzymes used in this study were: DNaseⅠ (Thermo ScientificTM, Lithuania, EU), the 2 proteases of proteinase K (Qiagen, Hilden, Germany) and dispaseⅡ (Sigma-Aldrich, St. Louis, MO, USA) and the 3 polysaccharidases of cellulase (Duchefa Biochemie, Haarlem, the Netherlands), amyloglucosidase (Sigma-Aldrich, St. Louis, MO, USA), and α-amylase (Sigma-Aldrich, St. Louis, MO, USA). The final concentrations of the enzymes used in this study were 0.1% for DNaseⅠ, 1% for proteinase K, amyloglucosidase and α-amylase, and 20 mg/ml for dispaseⅡ and cellulase.
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4

Imaging of Cell Nuclei on Nanofiber Scaffolds

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Cell nuclei on nanofiber randomly oriented PVDF-TrFE scaffolds were imaged after staining for 10 min with DAPI (1 μg/ml), then placed in a 1.7-ml microcentrifuge tube with 1 ml of BY-2 medium containing either 0.05% trypsin (Sigma-Aldrich, T2601), 0.8% cellulase (Duchefa Biochemie, C8001), 0.2% Macerozyme R-10 (Duchefa Biochemie, M8002), or 1.5% pectate lyase (Megazyme, E-PLYCJ), and shaken at room temperature for 1 hour. Mock treatments used BY-2 medium alone. Scaffolds were washed in 25 ml of fresh medium three times and then stained for 10 min with DAPI for imaging.
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5

Cell Wall Remodeling Effects on Signaling

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All chemicals and enzymes were purchased from Sigma-Aldrich unless stated otherwise. For all experiments, seedlings were grown for 6 days before treatment. The following products were used for treatments at the indicated final concentrations throughout the paper, unless stated otherwise: ISX (600 nM; DMSO), mock (DMSO), Driselase (0.03%, w/v; D8037, Sigma-Aldrich), cellulase (0.09%, w/v; C8001, Duchefa), pectinase (0.09%, w/v; 17389, Sigma-Aldrich), xylanase (0.09%, w/v; X2753, Sigma-Aldrich), and sorbitol (300 mM). For heat inactivation, enzymes were boiled for 10 min. Supernatants from treated Col-0 cultures were incubated with ixr1-1 seedlings (DMSO, ISX, and ISX + S) or boiled for 10 min and incubated with Col-0 seedlings (DMSO + S, bDri, bDri + S, Dri, and Dri + S). (ATKVKAKQRGKEKVSSGRP-GQHN), AtPep3 (EIKARGKNKTKPTPSSGKGGKHN), and flg22 (QRLSTGSRINSAKDDAAGLQIA) peptides were obtained from Peptron and dissolved in sterile water.
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6

Isolation of Pea Leaf Mesophyll Cells

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Pisum sativum plants were grown in a climatized chamber at 25 °C with a light/dark photoperiod of 16:8 hours. Intra-veining strips were cut out of leaves from 2-week-old plants (1.5 g) and incubated for 210 min at 30 °C with gentle shaking (70 rpm) in 10 mL of 1 M mannitol, 100 mM MES-KOH, pH 5.6, 0.37% w/v macerozyme, and 1.5 % w/v cellulase (Duchefa Biochemie, Haarlem, The Netherlands). The digestion reaction was stopped by adding 2 mL of 2 mM MES, 154 mM NaCl, 125 mM CaCl2, 5 mM KCl, pH 5.7, and the cell suspension was filtered through a polypropylene mesh (pore diameter: 105 µm; tissue thickness: 121 µm—polyester Woven filter, Spectrum Labs, Rancho Dominguez, CA, USA). Digested cells were washed twice by resuspending them in 2 mL of 4 mM MES, 0.4 M mannitol, and 15 mM MgCl2, pH 5.7. Finally, they were pelleted by gentle centrifugation (3 min at 100× g), resuspended in 1 mL of the same buffer, counted, and stored at 4 °C after having confirmed their integrity at the microscope.
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7

Chromosome Counting in Riccia fluitans

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Chromosome counting was carried out according to Schwarzacher [53 (link)]. Briefly, thallus tips from freshly started R. fluitans 001TC and R. fluitans BoGa cultures ensuring high cell division rates, were collected and transferred to ice water for 24 h and afterwards incubated in saturated 8-hydroxyquinoline solution for 3 h. Thallus pieces were then fixed overnight in Carnoy’s solution. The next day, thalli were washed five times with 10 mM citric acid buffer (pH 4.6) to remove the fixative. Thalli were then digested with 2.5% pectolyase (Duchefa, Haarlem, The Netherlands), 2.5% pectinase (Sigma-Aldrich, Darmstadt, Germany), and 2.5% cellulase (Duchefa, Haarlem, The Netherlands) for 30 min and washed with ddH2O. DAPI (10 µg/mL) staining was performed on object slides, tissue was then squashed with a cover slip, and staining results were immediately observed using a Leica DM5000 B microscope.
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