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Bis acrylamide

Manufactured by Roche

Bis-acrylamide is a chemical compound used as a cross-linking agent in polyacrylamide gel electrophoresis (PAGE) and other applications. It functions by creating covalent bonds between acrylamide polymer chains, forming a stable, three-dimensional gel matrix.

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2 protocols using bis acrylamide

1

Intestinal Protein Analysis via AU-PAGE

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Acid ureapolyacrylamide gel electrophoresis (AU-PAGE) Western blot analysis was performed on small intestinal tissue and luminal fluid as previously described.19 (link),24 Briefly, small intestinal ileal specimens (tissue and luminal aspirate fluid) were homogenized with a Brinkmann Polytron homogenizer in ice-cold 20% acetic acid (1:10 w/v) that contained 1:100 v/v Protease Inhibitor Cocktail III. The resulting suspension was stirred overnight at 4 °C and clarified the following day by ultracentrifugation (110,000x g × 30 min, 4 °C). Aliquots of these specimens were diluted with 0.5 volume of loading buffer (9 M urea, 5% v/v acetic acid, 0.1 mg/mL methyl green (Sigma)) and then resolved on polyacrylamide gels (12.5% acrylamide/2% bis-acrylamide (Roche, Indianapolis, IN), 8 M deionized urea (Sigma), and 5% v/v acetic acid). Samples were run toward the cathode (reverse typical polarity) at 130 volts in 5% v/v acetic acid running buffer until the methyl green indicator dye reached the bottom of the gel (typically ≈1.5 h). Proteins were then transferred from the gels to Immobilon PSQ PVDF membranes in 5% v/v acetic acid using a semi-dry transfer apparatus (Fisher Scientific, Pittsburgh, PA) at 1.5 mA/cm2 toward the cathode for 20 min. Each membrane was then fixed, washed, blocked, and probed as described for the dot blot analysis.
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2

Acid Urea-PAGE Western Blot Analysis

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Acid urea–polyacrylamide gel electrophoresis (AU-PAGE) Western blot analysis was performed on small intestinal tissue and luminal fluid as previously described.19 (link),24 Briefly, small intestinal ileal specimens (tissue and luminal aspirate fluid) were homogenized with a Brinkmann Polytron homogenizer in ice-cold 20% acetic acid (1 : 10 w/v) that contained 1 : 100 v/v Protease Inhibitor Cocktail III. The resulting suspension was stirred overnight at 4 °C and clarified the following day by ultracentrifugation (110 000g × 30 min, 4 °C). Aliquots of these specimens were diluted with 0.5 volume of loading buffer (9 M urea, 5% v/v acetic acid, 0.1 mg mL–1 methyl green (Sigma)) and then resolved on polyacrylamide gels (12.5% acrylamide/2% bis-acrylamide (Roche, Indianapolis, IN), 8 M deionized urea (Sigma), and 5% v/v acetic acid). Samples were run toward the cathode (reverse typical polarity) at 130 volts in 5% v/v acetic acid running buffer until the methyl green indicator dye reached the bottom of the gel (typically ≈1.5 h). Proteins were then transferred from the gels to Immobilon PSQ PVDF membranes in 5% v/v acetic acid using a semi-dry transfer apparatus (Fisher Scientific, Pittsburgh, PA) at 1.5 mA cm–2 toward the cathode for 20 min. Each membrane was then fixed, washed, blocked, and probed as described for the dot blot analysis.
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