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Chemidoc station

Manufactured by Bio-Rad
Sourced in United States, Spain, Italy

The ChemiDoc station is a laboratory imaging system designed for the capture and analysis of chemiluminescent, fluorescent, and colorimetric signals. It provides a versatile platform for various applications, including Western blotting, protein and nucleic acid gel imaging, and documentation.

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39 protocols using chemidoc station

1

Immunoblotting of Antioxidant Proteins

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Sample preparation and immunoblotting were performed as previously described [23] (link). Membranes were incubated with primary antibodies (anti-SOD1–ab13498; anti-SOD2–ab16956; anti-catalase- ab76024; anti-GPx1–ab108427; anti-VDAC1–ab154856; anti-TFAM–ab155240; anti-PGC-1α–ab77210; anti-PGC-1β–ab176328; anti-OPA1–ab119685; anti-MFN1–ab57602; anti-MFN2–ab56889; anti-DRP1–ab56788; anti-LC3A–ab52628; anti-HK1–ab55144, all–Abcam, USA; anti-beta-actin–MA5-15739, anti-Bcl-2-13-8800, Invitrogen, USA) overnight at 4 °C with gentle shaking. After washing, the membranes were incubated with peroxidase-conjugated secondary antibodies for 1 h at room temperature. Target proteins were detected using Novex ECL Kit (Invitrogen, USA) in ChemiDoc station (Biorad, USA). Optical densities of the protein bands were measured using ImageLab Software. Protein content was normalised on β-actin.
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2

Protein Extraction and Western Blot Analysis

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HEK293 cells were lysed in 25 mM Tris pH 7.4, 5 mM EDTA, 1% Triton X‐100, and complete protease inhibitor cocktail (Roche) and were then centrifuged. After centrifugation at 20,000 g for 15 min at 4°C, the soluble supernatant was conserved and subjected to SDS–PAGE. The protein concentration from supernatants was quantified by the bicinchoninic acid assay (BCA assay) using bovine serum albumin as a standard. Sample concentrations were adjusted and mixed with 1× high‐SDS sample buffer (4% SDS, 62 mM Tris–HCl pH 6.8, 0.1% bromophenol blue, 15% glycerol, 5% ß‐mercaptoethanol) and separated using 4–20% SDS mini‐PROTEAN® TGX Stain‐Free™ Precast Gels (Bio‐Rad) or 10 and 20% polyacrylamide–SDS gels and transferred into PVDF membranes (Millipore, 0.2 μm) using Trans‐Blot® Turbo™ Blotting System and Midi Transfer Packs (Bio‐Rad). The membranes were blocked in 5% non‐fat dry milk in PBS/0.1% Tween and incubated for 1 h at room temperature with the primary antibody, followed by 45‐min incubation with a species‐matched horseradish peroxidase‐labeled secondary antibody (1/10,000) (Jackson ImmunoResearch). Immunoreactivity was detected using chemiluminescence detection kit reagents (Luminata; Millipore) and a ChemiDoc Station (Bio‐Rad).
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3

Western Blot Analysis of Protein Samples

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Cells and tissue were lysed in RIPA buffer containing protease inhibitors (Roche, Mannheim, Germany). Protein samples were separated by 8–10% SDS-PAGE (Laemmli, 1970 (link)) and transferred to 0.45-μm PVDF membranes (Millipore, Darmstadt, Germany). Chemiluminescence signal was acquired in a ChemiDoc station (BioRad, Munich, Germany) and analyzed using Image Lab (Bio-Rad). REST mAb (12C11-1) was kindly provided by D J Anderson (Chen et al., 1998 (link)).
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4

Caspase 3/7 Activation in C2C12 Myoblasts

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C2C12 myoblasts (2000 cells/well) were seeded in 96-well black plates. After 24 h, cells were treated for 24 h with compounds of interest. Caspase3/7 activation was determined using the Caspase-Glo 3/7 Assay System (cat# G8090, Promega). Luminescence was measured with a Promega GloMax Plate Reader. Chemiluminescent signals were acquired using a ChemiDoc station (Biorad, Segrate, Italy).
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5

Signaling Pathways in BMDC Activation

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BMDCs were washed and resuspended at 6 × 106cells/mL in RPMI‐1640 with L‐glutamine supplemented with β‐mercaptoethanol (50 μM), penicillin/streptomycin (100 μg/mL) for 3 h prior to stimulation with HKCA (6.25 × 105cells/mL) or curdlan (100 μg/mL) at 37°C for 0–20 min. Cells were lysed (1% Triton, 120 mM NaCl, 50 mM Tris, 0.1% SDS, 1 mM EDTA, containing protease/phosphatase inhibitors) and resolved in SDS‐PAGE gels and transferred to PVDF membranes, blocked (Tris, 5% BSA, 0.05% Tween20) and probed with the indicated antibodies; pSyk (clone; C87C1), Syk (clone; D1I5Q), pErk and Erk (mAb Rabbit IgG), Pp38 (clone; D3F9), p38 (clone; D13E1), IκBα (clone; 44D4), pIκBα (clone; 14D4) (all immunoblotting antibodies from Cell Signaling Technologies) followed by anti‐rabbit‐HRP (Dako) secondary antibody. Proteins visualized by SuperSignal chemiluminescent reaction (Pierce) in a ChemiDoc station (BioRad). Densitometry measurements were performed with ImageJ software.
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6

Quantitative Protein Extraction and Analysis

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Total protein was isolated from cultured cells using RIPA buffer with added protease (Roche, 06538282001) and phosphatase inhibitors (Fisher Scientific, 502306746). Protein concentrations were quantified using a BCA assay (Pierce, PI23225) and equal amounts of protein were loaded for SDS-PAGE. GAPDH (Fitzgerald Industries International, 10R-G109a, 1:5000 dilution), p21 (Abcam, ab109199, and 1:500) and Erbb2 (Abcam, ab16901, 1:1000) primary antibodies and Anti-mouse IgG HRP-linked (Cell Signaling, 7076S) and Anti-rabbit IgG HRP linked (Cell Signaling, 7074S) secondary antibodies were used for blotting. Western blots were imaged after enhanced chemiluminescence using a Chemidoc station (Biorad).
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7

Western Blot Protein Quantification Protocol

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Purified protein fractions were isolated using the SurePrep RNA/Protein Purification kit (Fisher BioReagents, Fair Lawn, NJ, USA) and aliquots of protein (20 μg) were boiled for 5 min in Laemmli SDS loading buffer (10% glycerol, 5% SDS, 5% β-mercaptoethanol, 0.01% bromophenol blue and 125 mM TRIS-HCl [pH 6.8]) prior to loading onto a 12% acrylamide gel (Bio-Rad Laboratories, Hercules, CA, USA). The proteins were transferred to a PVDF membrane (Immobilon-P, Millipore, Bedford, MA, USA) using a mini Trans-Blot Electrophoretic transfer cell (Bio-Rad Laboratories, Hercules, CA, USA), which were then blocked with 5% non-fat milk. The membranes were probed overnight at 4°C with the anti-FAAH antibody (see Table 2) and then for 2 hours at room temperature with an ECL Horseradish Peroxidase-linked whole secondary antibody (GE Healthcare UK Limited, Buckinghamshire, UK) diluted 1:5000. Reactive bands were detected by chemiluminescence with the Amersham ECL Prime Western Blotting Detection Reagent (GE Healthcare UK Limited, Buckinghamshire, UK) and the membranes were analyzed on a ChemiDoc station with Quantity one software (Bio-Rad Laboratories, Madrid, Spain). The optical density of the specific protein bands were assessed relative to the housekeeping protein GAPDH, and they were normalized to the controls.
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8

FGF1 Signaling in Serum-Starved NIH 3T3 Cells

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Serum-starved NIH 3T3 cells were stimulated for 15 minutes with 1, 10, or 100 ng/mL FGF1V or FGF1V–vcMMAE in the presence of heparin (10 U/mL). The cells were then washed with PBS, lysed with SDS sample buffer, and sonicated. Total cell lysates were subjected to SDS-PAGE separation and Western blot analysis with anti-phospho-Erk1,2 kinase antibody (Cell Signaling Technology, Danvers, MA, USA), anti-phospho-FGFR antibody (Cell Signaling Technology), and anti-γ-tubulin antibody (Sigma-Aldrich) as a loading control. Horseradish peroxidase-conjugated secondary antibodies and a chemiluminescent substrate (Thermo Fisher Scientific) were used for visualization in a ChemiDoc station (Bio-Rad Laboratories Inc., Hercules, CA, USA). The intensities of detected bands were quantified based on Western blot densitometry, performed by ImageLab software (Bio-Rad Laboratories Inc.).
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9

Quantitative Dot-Blot Analysis of Plasma Antibodies

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293T-wt and 293T-gB cells were re-suspended in PBS and maintained on ice. Cell lysates were produced by sonication and the protein concentration was determined with Bicinchoninic acid assay (BCA). One microliter corresponding to 1 μg of cell lysate was spotted onto strips of nitrocellulose membranes (GE Healthcare, Little Chalfont, UK) and air-dried for 10 min. Five percent milk/PBS/0.05% Tween (Merck Millipore) was used to block the membrane for 30 min at room temperature. Plasma from mice was added to the membrane strips which were incubated overnight at 4°C and washed 3x with PBS/0.05% Tween for 10 min at RT. Anti-human IgG-HRP (Roth, Karlsruhe, Germany) (1:500) was added for 1 h at RT. Next, the membrane was washed 4x with PBS/Tween for 10 min at room temperature (RT). After incubation with HRP chemiluminescent substrate (ThermoFisher), signals were measured with a Chemidoc station (Bio-Rad, Hercules, CA). ImageJ software (NIH, freeware) was used for signal quantifications of dot-blots.
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10

Histone Modifications and Signaling Analysis

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Cultured cells were treated with PB or Lunasin (100 μM) for 24 hours. Acid extraction of histones was performed as described [79 (link)]. 10 μg of total purified histones were loaded per lane and run on 15% gels (Lonza). Cells were harvested and re-suspended in RIPA buffer (Sigma). Protein concentrations of cell lysates were determined by a bicinchoninic acid assay (Thermo Fisher Scientific) and 20–60 μg of total protein was loaded per lane on 10% gels (BioRad), subjected to SDS-PAGE, and transferred to a PVDF membrane (EMD Millipore). Lysates were probed with antibodies that recognize phosphorylated AKT (Cell Signaling #9916S), phosphorylated FAK (Cell Signaling #9330S), phosphorylated ERK 1/2 (Cell Signaling #4094), β-Actin (Santa Cruz #sc-47778), H3K9 (EMD Millipore #07-352), H4K12 (EMD Millipore #04-119), H4K8 (EMD Millipore #07-328), H3K14 (EMD Millipore #07-353). Densitometry and image analysis were performed using a ChemiDoc station equipped with ImageLab software (BioRad).
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