The largest database of trusted experimental protocols

32 protocols using anti cd56 apc

1

Characterization of Isolated NK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The purity of isolated NK cells (>95%) and expression of surface receptors were determined by flow cytometry using a FACSCalibur (BD-Biosciences). NK cell population was defined as NKp46+CD3 cells.
Changes in the expression of NK cell receptors were examined using the following antibodies: anti-NKp30 PE (Biolegend), anti-NKp44 PE (Biolegend), anti-NKG2D PE (BD-Biosciences), anti-CD16 FITC (Miltenyi Biotec), anti-CD56 FITC and APC (BD-Biosciences), anti-2B4 FITC (Biolegend), anti-NTB-A PE (Biolegend), anti-Dectin-1 PE, anti-TLR-2 PE and anti-TLR-4 PE (BD-Biosciences). Apoptotic NK cells were assessed after an incubation time of 9 h using Annexin V FITC (BD-Biosciences) after staining cells with the surface marker antibodies anti-NKp46 PE, anti-CD3 PerCP and anti-CD56 APC. Intracellular expression of CD56 after incubation with germ tubes for 6 h was investigated by firstly staining CD56 on the cell surface with anti-CD56 FITC (BD-Biosciences). Then, cells were fixed (4% formaldehyde), permeabilized (Wash Perm, BD-Biosciences) and intracellular CD56 was stained using anti-CD56 APC (BD-Biosciences). To remove surface markers, NK cells were incubated in 0.5% trypsin-EDTA (Sigma) for 30 min at 37 °C before samples were stained. All data were analyzed with FlowJo software (Tree Star Inc.).
+ Open protocol
+ Expand
2

Comprehensive Immune Cell Profiling by FCM

Check if the same lab product or an alternative is used in the 5 most similar protocols
FCM assay was conducted as we previously reported with several modifications [2 (link), 15 (link)]. In details, the unstimulated MNCs (day 0) and the MNC-derived cells (day 7, day10, day 14) were harvested by centrifugation at 1200 rpm for 5 min at room temperature (RT) and washed by 1 × PBS for twice. Then, the cells were resuspended in phosphate buffer solution (PBS) contained 2% fetal bovine serum (FBS) and labelled with the fluorescence conjugated antibodies including anti-CD3-PE, anti-CD3-FITC, anti-CD4-PE, anti-CD8-PE-Cy7, anti-CD56-APC, anti-CD16-FITC, anti-NKG2D-Percp5.5, anti-NKp44-APC-Cy7, anti-NKp46-PE-Cy7, anti-NKG2A-PE, anti-CD107a-PE, 7-AAD, PI or Annexin V-FITC (BD Biosci, USA) in dark for 30 min. Finally, the cells were washed by 1 × PBS for twice and turned to FACS Canto II (BD Biosci, USA) flow cytometer for detection and FlowJo 10.0 software (Tree Star, USA) for analysis. The detailed information of the indicated antibodies was listed in Additional file 1: Table S2.
+ Open protocol
+ Expand
3

NK Cell Phenotyping by Flow Cytometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
In cell culture assays NK cells were phenotyped by flow cytometry for CD16 and NKG2D at various time points using anti-CD56-APC (BD-Biosciences), and anti-CD16-PE (BD-Biosciences). Antibody staining of single cell-suspensions was performed by manufacturer’s instructions/protocol. Stained cells were analyzed by flow cytometry.
+ Open protocol
+ Expand
4

Cytotoxic Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen PBMC samples from all 10 trial subjects isolated prior to first administration of IAD and on day 14 of trial were thawed and stained with anti-CD3-V500 (BD, Oxford U.K) and anti-CD56-APC (BD, Oxford U.K) for 30 mins on ice before fixing/permeabilising (as above) and then staining with anti-Granzyme A-PE (Biolegend, London, U.K). and anti-Perforin-FITC (Biolegend, London, U.K) for a further 30 mins on ice prior to analysis by flow cytometry.
+ Open protocol
+ Expand
5

Longitudinal Lymphocyte Phenotyping Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Absolute lymphocyte count (ALC) and lymphocyte phenotype were evaluated weekly for 4 weeks, monthly for 12 months, and every 6 months thereafter, as previously described [30 (link)]. The fluorochrome labeled monoclonal antibodies anti-CD3-Alexa 700, anti-CD3-PerCP, anti-CD4-V450, anti-CD4-PE, anti-CD8-APC Fluor780, anti-CD8-PacBlue, anti-CD16-FITC, anti-CD20 PECy7, anti-CD45-PerCP, anti-CD45RA-APC, anti-CD56-APC, anti-Ki67-FITC and anti-CD197 PECy7 (BD Biosciences, Franklin Lakes, NJ), and anti-CD45RA-QDOT655 (Invitrogen, Carlsbad, CA) were used. ALC was determined using Trucount beads (BD Biosciences). Cells were interrogated using an LRSII Flow Cytometer (BD Biosciences), and data were analyzed using FlowJo software (Tree Star, San Carlos, CA). Memory and regulatory phenotypes were defined as previously described [31 (link)–34 (link)].
+ Open protocol
+ Expand
6

Evaluating NK Cell Activity Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
The ADCC assay for measuring intracellular NK cell IFN-γ and CD107a expression was conducted and analysed with the gating strategy as previously described23 (link). Briefly, 96-well plates were coated overnight at 4 °C with A/California/04/09 HA protein (1 μg/ml) and chimeric cH9/1 HA protein (1 μg/ml). The plates were then washed with PBS and incubated with heat-inactivated sera (prediluted 1:10) for 2 h at 37 °C. Plates were then washed again with PBS and incubated with 105 CD16 176 v NK-92 cells per well (mycoplasma-free, human NK cell line expressing high affinity 176 V variant CD16 receptor) (Fox Chase Cancer Center, Philadelphia, PA, USA). As a negative control, NK-92 cells lacking the expression of CD16 were added to an additional well per sample. Cells were incubated with anti-CD107a-AF488 antibody (Biolegend, San Diego, CA, USA), Brefeldin A (5 μg/ml, BD) and monensin (5 μg/ml, BD) for 16 h at 37 °C. After incubation, the cells were stained with LIVE/DEAD Fixable Aqua dead cell staining kit (Invitrogen), anti-CD3-PE CF594 (BD) and anti-CD56-APC (BD) before intracellular staining with anti-IFN-γ-BV-421 (Biolegend). The cells were acquired on BD Fortessa. Data analysis was performed using FlowJo version 10 (treeStar).
+ Open protocol
+ Expand
7

Evaluating IFN-γ Production in Newly Derived NK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To investigate the capability of DLE-newly derived NK-like cells of producing IFN-gamma (IFNγ) upon stimulation, an IFNγ assay was performed. After 30-day coculture, the produced cells were stimulated with IL-12 (10 ng/mL) and IL-18 (50 ng/mL) for 12 hours. NK-like cells were harvested and Brefeldin A (BFA, 10 μg/mL) was added for 4 hours to inhibit protein intracellular transport. After BFA blockage, cells were carefully washed, followed by incubation with anti-CD56-APC, anti-CD11c-FITC (BD Biosciences), and anti-IFNγ-PE (Biolegend) conjugated antibodies to perform extra- and intracellular staining, respectively. A FACSCanto II equipment was used for multiparametric flow cytometric analysis.
+ Open protocol
+ Expand
8

Flow Cytometric Analysis of Lymphocyte Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples of EDTA anticoagulated peripheral blood (5 mL) were collected from three groups’ patients. All samples were tested within 6 h of being obtained. Briefly, CD3+/CD4+/CD8+ T-cell, CD19+ B-cell, CD3CD16+CD56+ NK-cell, CD3+CD16+CD56+ NKT-cell, CD4+CD25+CD127 Treg-cell, CD3+HLA-DR+ T-cell and CD4+HLA-DR+ T-cell, CD8+ CD28+, and CD16+CD56+CD69+ counts (%) were measured by multiple-color flow cytometry with human monoclonal anti-CD3-FITC, anti-CD4-PE, anti-CD8-APC, anti-CD19-PE, anti-CD16-FITC, anti-CD56-APC, anti-CD25-PE, anti-CD127-BV421, anti-HLA-DR-Alexa700, anti-CD28-BV510 and anti-CD69-PE antibodies (BD Multitest) according to the manufacturer’s instructions. The cells were analyzed by flow cytometry system (Becton Dickinson, USA) according to the operating procedure.
+ Open protocol
+ Expand
9

Comprehensive Immune Cell Profiling by Flow Cytometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
NK, T and Monocyte cell surface antigens were analysed by flow cytometry. Briefly, two million PBMCs were stained with a surface antibody’s cocktail: anti-CD3 PerCP-Cy 5.5, anti-CD56 APC and anti-CD16 PE-CyTM7 from BD Biosciences, anti-CD45 Krome Orange from Beckman Coulter and anti-Vδ2 Brilliant Violet 605 from Biolegend (Mix NK and gammadelta T cells); anti-CD4 FITC, anti-CD8 PE and anti-CD3 Pacific Blue from BD Biosciences and anti-CD45 Krome Orange (Mix T cells); anti-CD14 APC-H7 and anti-CD16 V450 from BD Biosciences and anti-CD45 Krome Orange (Mix Monocytes), in 1× PBS, 1% Bovine Serum Albumin (BSA) (from Sigma Aldrich) and 0.1% Sodium azide (NaN3) (from Serva) solution for 15 min at 4°C. Afterwards, PBMCs were washed with 0.3 mL of 1× PBS, 1% BSA and 0.1% NaN3 solution and centrifuged at 1600 rpm for 5 min. Next, PBMCs were fixed with 1% Paraformaldehyde (PFA) (Bio-Rad, Hercules, California, USA) in 1× PBS, 1% BSA and 0.1% NaN3 solution for 15 min at room temperature in the dark, washed as before and centrifuged at 1600 rpm for 5 min. Cells were acquired using a FACSLyric (BD Biosciences) and analysed by BD FACSuite software (BD Biosciences).
+ Open protocol
+ Expand
10

Immunophenotyping of Myelodysplastic Syndrome

Check if the same lab product or an alternative is used in the 5 most similar protocols
Flow cytometry (FCM) was used to detect clusters of immunocytes in patients with MDS. Fresh whole blood samples collected into EDTA (100 μL) were immunostained with anti-CD3-PerCP, anti-CD8-FITC, anti-CD4-PE, anti-CD56-APC, anti-CD16-FITC, anti-CD19-APC, and mouse isotype controls (BD Biosciences, San Jose, CA, USA) in separate Trucount tubes (BD Biosciences, USA) for 30 min at 4°C in the dark, followed by erythrocyte lysis using 2 mL erythrocyte lytic solution (BD PharMingen, San Diego, CA, USA). After centrifugation at 1300 rpm for 5 min, the supernatant was discarded. Cells were washed with phosphate-buffered saline (PBS) and resuspended in 300 μL PBS, and at least 50,000 cells were acquired on a FACSCalibur flow cytometer (BD Biosciences, USA). Analysis was done using CellQuest software version 3.1 (Becton Dickinson, Franklin Lakes, NJ, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!