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5 protocols using ffp26

1

Protein Expression Analysis in H9c2 Cells

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Proteins in H9c2 cells were extracted by lysis buffer (P0013J, Beyotime). After determining the concentration with a BCA detection kit (P0012, Beyotime), the proteins were loaded and electrophoresed on 10% SDS polyacrylamide gel (P0012AC, Beyotime), and then transferred onto PVDF membranes (FFP26, Beyotime,). After using 5% non-fat milk to block membranes for 60 min at 37°C, the following primary antibodies were incubated with membranes overnight at 4°C: Bcl-2 (ab59348, 1:1000, 26 kDa, Abcam, USA), Bax (ab32503, 1:1000, 21 kDa, Abcam), Cleaved caspase-3 (ab49822, 1:500, 17 kDa, Abcam), iNOS (ab3523, 1:200, 135 kDa, Abcam), Cox-2 (ab15191, 1:250, 69 kDa, Abcam), CDK4 (ab199728, 1:2000, 34 kDa, Abcam), Cyclin D1 (ab16663, 1:25, 36 kDa, Abcam), HSP70 (ab181606, 1:1000, 70 kDa, Abcam), and GAPDH (ab181602, 1:10000, 36 kDa, Abcam). Following extensive washing, protein bands were incubated with the secondary antibody: Goat Anti-Rabbit IgG H&L (HRP) (ab205718, 1:2000, 42 kDa, Abcam) at 37°C for 2 h. The detection of signal was performed according to a standard ECL method (27), and analysis software (Image J 1.5i, National Institutes of Health, USA) was used for images to measured protein expression. GAPDH was used as housekeeping gene.
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2

Western Blot Analysis of Autophagy Proteins

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The cellular proteins were extracted form skeletal muscle cells and lysed by RIPA lysate (R0010, Solarbio, Peking, China). Equal amounts of protein were electrophoresed on sodium lauryl sulfate polyacrylamide gel (SDS-PAGE) with a loading of 20 μL per well. The protein was then transferred to an activated PVDF membrane (FFP26, Beyotime, Shanghai, China) and blocked with 5% skim milk powder (P0216, Beyotime, Shanghai, China) for 2 h. Appropriately diluted primary antibodies against Beclin-1 (Abcam, Cat# ab223372), p62 (Abcam, Cat# ab101266), p-mTOR (Abcam, Cat# ab109268), mTOR (Abcam, Cat# ab2732), p-AKTSer473 (Abcam, Cat# ab18206), p-IRS1Ser616 (CST, Cat# 2386S), IRS (CST, Cat# 2382S), AKT (CST, Cat# 2938S), LC3 (Affinity, Cat# AF5402) and β-actin (Abcam, Cat# ab8227) were added and incubated at 4 °C overnight. After washing the membrane, the corresponding secondary antibody (Cat# A0208 and A0216, Beyotime, Shanghai, China) was added for incubation. Chemiluminescence detection was then carried out using an enhanced chemiluminescence reagent (P0018AS, Beyotime, Shanghai, China). After development and fixing treatment, the film was photographed by a gel imaging analysis system (UniCel Dxl800, Beckman Coulter, Pasadena, CA, USA).
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3

Protein Separation and Immunoblot Analysis

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The collected samples were denatured by heating them for 5 min at 95°C with SDS-PAGE Sample Loading Buffer (P0015L, Beyotime, China). For SDS-PAGE, equal amounts of protein (20 g total protein) were loaded, and the gel was run at two stages: first 60 V for 20 min and then 80 V for 90 min using the Bio-Rad Mini-Protean (1,658,001). After activating the PVDF (FFP26, Beyotime, China) with methanol for a few minutes, the protein from the gel was transferred to the PVDF at 200 mA for 90 min using Bio-Rad Min Trans-Blot (1703930). A blocking buffer was used to block the membrane for 15 min at room temperature (P0231, Beyotime, China). According to the manufacturer’s recommended ratio, the first antibodies were diluted with dilution buffer (P0023A, Beyotime, China) and used for overnight membrane incubation at 4°C. The membrane was washed in TBST (P0023C, Beyotime, China) three times for 5 min each time and then incubated for 1 h at room temperature with the recommended dilution of conjugated secondary antibody in the dilution buffer (P0023D, Beyotime, China). Again, TBST was used to wash the membrane three times for 5 min each, and then HRP substrate (Millipore, WBKLS0500) was added to the membrane. Images were taken using the chemiluminescence Gel Doc (Bio-Rad Gel Doc/Chemi Doc Imaging System). The antibodies used are listed in Supplementary Table S3.
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4

Protein Expression Analysis by Western Blot

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Cells were lysed using RIPA buffer to obtain total protein. Protein concentration was measured by a BCA Protein Assay Kit (P0012, Beyotime, Shanghai, China). Equivalent amounts of proteins were then electrophoresed on SDS-PAGE and transferred onto PVDF membranes (FFP26, Beyotime, Shanghai, China). Membranes were blocked using 5% BCA for 2 h at room temperature and incubated with primary antibodies against protein ASAP3 (abs100894, Abisin, Shanghai, China), F-actin (ab205, Abcam, China), BMP2 (ab14933, Abcam, China), RUNX2 (ab76956, Abcam, China), AKT (ab38449, Abcam, China), p-AKT (ab38449, Abcam, China), and GAPDH (ab9485, Abcam, China) at 4°C overnight. After washing with PBST, membranes were incubated with secondary antibodies (Abcam, UK) at room temperature for 1 h. ECL solution (Thermo Fisher Scientific, China) was then prepared, and the bands on the membranes were scanned and imaged in a dark room. The results were quantified using ImageJ. GAPDH was used as the internal control [19 (link)].
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5

Western Blot Analysis of BDNF and TrkB

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Brain tissue from one rat was used as one sample for western blot and six samples were obtained at each time point from the rats in the surgical group. Total protein was extracted using RIPA buffer (R0010, Solarbio) and the concentration was measured using a BCA Protein Assay Kit (PC0020, Solarbio). The supernatants of the protein were separated by 15% SDS-PAGE and then transferred onto a PVDF membrane (FFP26, Beyotime, China). The membrane was blocked with 5% (w/v) skimmed milk for 1 h at 37°C, and then incubated with specific primary antibodies (listed in Table 2) at 4°C overnight. Subsequently, the membrane was treated with HRP-conjugated secondary antibody (Goat Anti-Rabbit, 1:2000, ab205718, Abcam, USA) for 1 h at 37°C, and was then washed 3 times at 10-min intervals. The specific protein signal was detected with an ECL detection kit (P0018FS, Beyotime) and imaged using Image J software (Image J 1.8.0, National Institute of Health).

List of primary antibodies used for western blots

ProteinAntibodyCatalog NumberCompanyAntibody Dilution
BDNFRabbit Anti-BDNF antibodyab108319Abcam1:1000
TrkBRabbit Anti-TrkB antibodyab18987Abcam1:1000
GAPDHRabbit Anti-GAPDH antibodyab181602Abcam1:10,000
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