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Rat anti cd31 antibody

Manufactured by BD
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The Rat anti-CD31 antibody is a laboratory research reagent used to detect the CD31 protein, also known as platelet endothelial cell adhesion molecule (PECAM-1). CD31 is a cell surface glycoprotein expressed on endothelial cells and plays a role in cell-cell adhesion. This antibody can be used for immunohistochemistry and flow cytometry applications to identify and study endothelial cells.

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20 protocols using rat anti cd31 antibody

1

Immunofluorescence Analysis of Vascular Endothelial Cells and Apoptosis

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Fixed specimens were embedded in OCT compound (Sakura Finetek, Tokyo, Japan) and sectioned (10-μm thick slices). For immunofluorescence analyses, rat anti-CD31 antibody (1/200) (BD Biosciences, San Diego, CA, USA) was used to stain vascular endothelial cells and rabbit anti-cleaved caspase-3 antibody (1/200) (#9579, Cell Signaling Technology, Danvers, MA, USA) to stain apoptotic cells. Anti-rat IgG Alexa Fluor 488 and anti-rabbit IgG Alexa Fluor 546 (Invitrogen, Carlsbad, CA, USA) were used as secondary antibodies. Samples were visualized using a Leica DM5500B and processed with the Leica application suite (Leica Microsystems, Bensheim, Germany). All images shown are representative of more than 3 independent experiments. Vessels and apoptotic cells were counted in more than 3 different fields in each tumor at a magnification of ×100.
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2

Immunohistochemical Analysis of S1P2 Receptor

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Mice were anesthetized with Avertin and were perfused with cold PBS and subsequently with 4% PFA in PBS solution. The brains were removed, post-fixed with 4% PFA for 24 h and transferred to 30% sucrose solution. Frozen brains were cut with a thickness of 30 μm in a cryostat. Slices were preserved in 30%PEG 30% sucrose PBS. The brain slices were washed three times with Tris-buffered saline (TBS) and were then blocked with TBS-blocking solution (1% bovine serum albumin, 0.2% skim milk and 0.3% Triton X-100 in TBS) for 1 h and incubated with the following primary antibodies in TBS-blocking solution overnight on a shaker at 4 °C. Rabbit anti-S1P2R antibody (1:100, Proteintech Group Inc., Chicago, IL) and rat anti-CD31 antibody (1:100, BD Biosciences, Pharmingen, San Jose, CA) were used as primary antibodies. Sections were washed three times with TBS and then they were incubated with donkey anti-rabbit IgG Alexa-594 and goat anti-rat IgG Alexa-488 (1:250, Life Technologies, Molecular Probes, Grand Island, NY). Brain slices were stained with DAPI for 7 min and were mounted onto slides. Samples were observed on a Zeiss LSM 510 Meta Confocal microscope (Carl Zeiss Inc.). Images were captured using Zen LE software (Carl Zeiss). The specificity of the S1PR2 antibody was confirmed by lack of signal in the S1pr2−/− brain sections.
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3

Integrin β3 and CD31 Immunostaining

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Goat serum (Abcam, Cambridge, Massachusetts), rat anti-integrin β3 antibody (cat. no. 181720; BD Biosciences, Franklin Lakes, New Jersey), rat anti-CD31 antibody (1:100; cat. no. 551262; BD Biosciences), Cy3-conjugated goat anti-rat (1:100; cat. no. 115-165-003; Jackson ImmunoResearch Europe Ltd, Newmarket, the United Kingdom), goat anti-rat secondary antibodies (1:100; cat. no. 115-095-003; Jackson ImmunoResearch Europe Ltd), and glyceraldehyde phosphate dehydrogenase (GAPDH) were used as loading controls. The total protein level was normalized to the GAPDH protein level.
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4

Integrin β3 and CD31 Expression in U87MG Tumors

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The U87MG tumors
were immediately snap-frozen in the OCT (optical cutting temperature)
solution, and were then cut into slices (5 μm). After thorough
drying, slices were fixed with ice-cold acetone for 10 min, and dried
in the air for 20 min. Sections were blocked with 10% goat serum for
30 min, and then were incubated with the hamster anti-integrin β3 antibody (1:100, BD Biosciences, San Jose, CA) and rat anti-CD31
antibody (1:100, BD Biosciences) for 1 h at room temperature. After
incubating with Cy3-conjugated goat anti-hamster and fluorescein isothiocyanate
(FITC)-conjugated goat anti-rat secondary antibodies (1:100, Jackson
ImmunoResearch Inc., West Grove, PA) and washing with PBS, the fluorescence
was visualized with an Olympus fluorescence microscope (Olympus America
Inc., Center Valley, PA). All the pictures were taken under 200×
magnification. Brightness and contrast adjustments were made equally
to all images.
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5

Quantitative Histological Assessment of Angiogenesis

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At postoperative day 28, the gastrocnemius was harvested, fixed in methanol, paraffin-embedded, and cross-sectioned (6μm) for histological evaluation. Sections were blocked with 10% donkey serum. Primary antibodies were diluted in PBS containing BSA. Sections were stained for CD31 using a rat anti-CD31 antibody (BD) and smooth-muscle α-actin (αSMA) using a rabbit anti-αSMA antibody (Sigma). For immunofluorescent detection, AlexaFluor-conjugated secondary antibodies were used (Invitrogen). Nuclei were stained with DAPI (Research Organics). Using fluorescent microscopy (Zeiss), CD31+ capillary forms and CD31+/αSMA+ arterioles were quantified in 3 distinct high-power fields (20x) from 3 independent sections in each animal.
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6

Quantifying Endothelial Cell Proliferation

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Endothelial cell (EC) proliferation in mice lungs was determined by staining BrdU labeled lung ECs as previously described (Liu et al., 2019 (link)). Briefly, BrdU (i.p., 150 mg/kg, BW; Sigma B5002) was injected in mice 14 h before sacrifice. Mouse lung cryosections (5 m thick) were stained with mouse anti-BrdU antibody (1:25, BD Biosciences), rat Anti-CD31 antibody (1:50, BD Biosciences) and DAPI. EC number was analyzed by using ImageJ software (NIH). The number of ECs with positive staining of BrdU was normalized to the total number of ECs. In vitro EC proliferation was also assayed in cultured ECs using the proliferation kit obtained from Abcam Inc (ab126556, Cambridge, United Kingdom).
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7

Quantifying Cardiac Vascularity and Runx2

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The frozen sections and paraffin-embedded sections were prepared from the hearts. Capillary density and Runx2 expression were examined by immunohistochemical staining using the Vectastain ABC kit (Vector Laboratories) with rat anti-CD31 antibody (BD Biosciences, 550274, 1/100) and rabbit anti-Runx2 antibody (Cell signaling Technology, #12556, 1/100). Immunostained sections were examined under a light microscope (KEYENCE, BZ-X710). The number of CD31+ cells at the border zone was quantitatively estimated by a researcher blinded to the assay conditions.
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8

Immunofluorescence Staining of Mouse Brain

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Mice were anesthetized with Avertin and were perfused with cold PBS and subsequently with 4% PFA in PBS solution. The brains were removed, post-fixed with 4% PFA for 24 h and transferred to 30% sucrose solution. Frozen brains were cut with a thickness of 30 μm in a cryostat. Slices were preserved in 30%PEG 30% sucrose PBS. The brain slices were washed three times with Tris-buffered saline (TBS) and were then blocked with TBS-blocking solution (1 % bovine serum albumin, 0.2 % skim milk, and 0.3 % Triton X-100 in TBS) for 1 h and incubated with the following primary antibodies in TBS-blocking solution overnight on a shaker at 4 °C. Rabbit anti-S1P2R antibody (1:100, Proteintech Group Inc., Chicago, IL), rat anti-CD31 antibody (1:100, BD Biosciences, Pharmingen, San Jose, CA) were used as primary antibodies. Sections were washed three times with Tris-buffered saline (TBS) and then they were incubated with donkey anti-rabbit IgG- Alexa-594, goat anti-rat IgG Alexa-488 (1:250, Life Technologies, Molecular Probes, Grand Island, NY). Brain slices were stained with 4′,6-diamidino-2-phenylindole (DAPI) for 7 minutes and were mounted onto slides. Samples were observed on an Zeiss LSM 510 Meta Confocal microscope (Carl Zeiss Inc.). Images were captured using Zen LE software (Carl Zeiss). The specificity of the S1PR2 antibody was confirmed by lack of signal in the S1pr2−/− brain sections.
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9

Perfusion, Fixation, and Immunostaining of Brain Tissue

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Animals were euthanized using pentobarbital (i.p, 150 mg/kg body weight, Streuli Pharma AG) and perfused transcardially with Ringer solution (containing 5 ml/l Heparin, B. Braun) followed by paraformaldehyde (PFA, 4%, in 0.2 M phosphate buffer, pH 7). Brain tissue was collected and post-fixed for 6 h in 4% PFA. For cryoprotection, tissue was transferred to 30% sucrose and stored at 4°C. Coronal sections were cut at a thickness of 40 µm using a sliding microtome (Microm HM430, Leica), collected, and stored as free-floating sections in cryoprotectant solution at −20°C.
For immunostaining, brain sections were blocked with 5% normal donkey serum for 1 h at room temperature and incubated with primary antibodies (rabbit anti-GFAP 1:200, Dako, #GA524; goat anti-Iba1, 1:500 Wako, #011-27991; NeuroTrace™ 1:200, Thermo Fischer; mouse anti-NeuN Antibody 1:500, Merck, #MAB377; rabbit anti-Neurofilament 200 antibody 1:200, Merck, #N4142; guinea pig anti-Neurofilament L, 1:200, Synaptic Systems, rat anti-CD31 antibody 1:50, BD Biosciences, #MEC13.3; goat anti-CD13, 1:200; R&D Systems, #AF2335) overnight at 4°C. The next day, sections were incubated with corresponding secondary antibodies (1:500, Thermo Fischer Scientific). Nuclei were counterstained with DAPI (1:2,000 in 0.1 M PB, Sigma). Mounting was performed using Mowiol.
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10

Immunostaining of Hindlimb Muscle Capillaries

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For immunostaining of the tissue specimens, hindlimb muscles were removed and fixed with acetone, methyl benzoate, xylene, and paraffin-embedded. Sections (6 μm in thickness) were taken from the paraffin-embedded specimens at 150 μm intervals, stained with rat anti-CD31 antibody (H553373, BD Pharmingen). The specimens were incubated with Alexa Flour 488 goat anti-rat antibody (A-11006, Life Technologies), followed by washing and mounting in Vectashield medium containing DAPI for visualization of nuclei. The stained sections were visualized using laser scanning confocal microscopy (Olympus FluoView FV1000). Capillary densities were assessed by counting the number of CD31-positive features per high power field (×400). Three randomly-selected microscopic fields form three serial sections in each tissue block were examined for capillary counting.
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