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Nickel agarose

Manufactured by Thermo Fisher Scientific
Sourced in United States

Nickel agarose is a chromatography resin used for the purification of proteins containing a histidine tag. It utilizes the affinity between nickel ions and histidine residues to selectively bind and capture the target proteins from complex mixtures.

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2 protocols using nickel agarose

1

ROR Synthesis and G9A Purification

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The DNA template for ROR synthesis was amplified by PCR, which contained an RNA polymerase T7 promoter site upstream of the sequence. DNA was isolated and purified using anion exchange columns (Qiagen) and sequenced to confirm that additional mutations had not been incorporated. In vitro RNA transcription synthesis used the mMESSAGE mMACHINE Kit according to the manufacturer’s instructions (Ambion, USA). RNA was purified by the MEGAclear Transcription Clean-Up Kit (Ambion).
The region encoding G9A was amplified by PCR from pBABE-FLAG-hG9a (Addgene, USA) and cloned into pET28a. Proteins were purified with nickel agarose (Thermo Fisher) and measured by the BCA method (BioRad, USA). The N-terminal FLAG-tag protein was expressed in 293 T and then purified with M2 flag beads (Sigma-Aldrich) and eluted with flag peptide (Sigma-Aldrich). Purified, concentrated proteins were stored at -20 °C in a buffer of 20 mM HEPES, pH 7.0, 100 mM NaCl, 0.5 mM EDTA, and 5 % glycerol.
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2

Purification and Phosphorylation Assay for Yeast Kin1/2

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The yeast strain expressing Flag-tagged Kin1 or Kin2 from a galactose-inducible promoter was grown in a complete medium containing 10% galactose and 2% raffinose for 24 hours and harvested. The recombinant Flag-Kin1 and Flag-Kin2 proteins were purified using anti-FLAG M2 agarose (Sigma) using standard protocols. For protein expression in bacteria, we used BL21(DE3) cells and purified proteins by nickel agarose or glutathione cross-linked agarose (Thermo Scientific) as described previously (36 (link)). Purified proteins were mixed with Pal2 in a reaction buffer (20 mM Tris-HCl pH8.0, 50mM KCl, 25 mM MgCl2 and 1mM PMSF) containing γ−32P-ATP or γ−33P-ATP. The reaction mixture was quenched by addition of 2X SDS buffer and separated by an SDS-PAGE. The gel was stained, dried and subjected to autoradiography.
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