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24 protocols using sig 39320

1

Immunostaining of Brain Sections

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The brain sections were prepared as described previously (22 (link), 55 (link)). In brief, the brain tissues were sagittally sectioned 30 μm thick with a Cryostat (CM3000; Leica). Immunostaining was performed as described previously (22 (link), 34 (link), 57 (link)). Briefly, after blocking nonspecific protein binding, the sections were then incubated with a monoclonal antibody 6E10 (catalog no.: SIG-39320; 1:2000 dilution; Covance) and monoclonal antibody against GFAP (catalog no.: SMI-22R; 1:5000 dilution; Covance). Then sections were incubated with biotinylated secondary antibody of horse antimouse IgG. Following washing, the Vectastain kit (Vector Laboratories) was applied. Samples were visualized using 3,3′-diaminobenzidine as a substrate (Vector Laboratories). The sections were processed deleting primary antibody as negative controls and counterstained with hematoxylin (Sigma–Aldrich).
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2

Amyloid Pathology in Transgenic Mice

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15–24 month-old Eu and TcMAC21 mice (n = 6 each) were perfused with PBS, then a half brain was used to make lysate for western blot and ELISA, and the other half was fixed in 4% PFA. WesternBlot and ELISA: cortex and hippocampus were removed and lysed with RIPA buffer. Protein extracts were separated by 4–12% SDS-PAGE, transferred to PVDF membranes and then probed with APP antibody (Millipore, MAB348) and beta actin. For ELISA, the above lysate was spun at 16,000 g for 30 min at 4°C. Supernatant was analyzed to determine Aβ levels by human/rat β amyloid ELISA kit from Wako (Aβ40: Cat# 294–64701; Aβ42: Cat# 290–62601). Amyloid plaque staining: mouse brains were fixed by immersion in 4% PFA, embedded in paraffin, and sectioned at 5 µm. Sections were deparaffinized and protein antigenicity was unmasked, and then the endogenous peroxidase activity was inhibited with 1.5% hydrogen peroxide. Sections were incubated with mouse anti-β-amyloid (Covance, Cat# SIG-39320), biotinylated goat anti-mouse IgG, and Avidin/Biotin mixture and then developed in 3,3′-Diaminobenzidine (DAB).
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3

Measuring Abeta Oligomers and Monomers

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Determination of oligomeric and monomeric concentrations of Abeta contained in a given Abeta preparation was done according to the method of LeVine [39] (link). Briefly, total Abeta concentration is measured by two-site ELISA using different capture (6E10 monoclonal antibody, Covance SIG-39320) and detection (4G8- conjugated to biotin, Covance, SIG39240) antibodies and quantifyied with streptavidin-horseradish peroxidase (Millipore catalog number AP308P). Oligomerized Abeta is measured in the same samples by a single-site ELISA in which monoclonal antibodies to the same epitope are used for capture (4G8, Covance SIG-39330) and detection (4G8-biotin). The 4G8-biotin cannot bind to captured monomer because the epitope is blocked by the capture antibody, so only oligomers are detected with this configuration. The streptavidin-horseradish peroxidase therefore reports only oligomeric Abeta which has additional exposed 4G8 epitopes. Monomer concentration is calculated as the difference between total Abeta concentration and oligomer concentration.
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4

Immunofluorescent Staining of Cultured Cells

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At 8 DIV, cells were washed with ice-cold PBS and fixed in a solution of 4% paraformaldehyde for 20 min at room temperature (RT) and washed twice with PBS. Cells were then treated with 0.1 M PBS, 0.3% Triton X-100 containing 1% BSA and 1% normal blocking serum prepared from the species in which the secondary antibody was raised for 1 h at RT.
The following primary anti-sera were used: anti-6E10 (mouse; Covance, SIG-39320, batch no. D11AF00145; 1:1000), anti-β-III-tubulin (mouse; R&D Systems, MAB-1195, batch. no. HGQ0113121; 1:1000), anti-GFAP (rabbit; Dako, Z0334, batch no. 20005461; 1:1000) overnight at 4°C. Cells were washed with PBS and incubated with goat Alexa 488-conjugated anti-mouse, goat Alexa 568-conjugated anti-rabbit, goat Alexa 658-conjugated anti-mouse (Invitrogen) secondary antibodies for 30 min at 37°C. Cells were washed twice in PBS and incubated with the nuclear dye Hoechst 33258 (1 µg/ml) for 20 min at RT, washed with PBS and mounted with 0.1% para-phenylendiamine solution.
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5

Cellular and Tissue Immunofluorescence Staining

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The cellular immunofluorescence staining for Lamin B1 (1:100, CL594-66095, Proteintech, China) was performed to detect cell senescence. For tissue immunofluorescence staining, after blocking, the frozen sections were incubated with primary antibodies against NeuN (1:1000, ab177487, Abcam, USA), Aβ (mouse anti-Aβ (1:200, SIG-39320, Covance), DCX (1:100, ab18723, Abcam, USA), MAB1281 (1:100, MAB1281, Merck, USA), GFAP (1:500, 16825-1-AP, Proteintech, China) and Iba1 (1:100, 10904-1-AP, Proteintech, China) overnight at 4 °C, and then incubated with Cy3 or FITC-conjugated anti-mouse or ant-rabbit IgG (1:200, AB0122, Abways, China) for 2 h. For EdU/DCX, EdU/NeuN, or EdU/Nestin double immunofluorescence staining, EdU solution (5 mg/kg) was intraperitoneally injected daily for three consecutive days before the mice were sacrificed, according to the instructions of the Cell-Light EdU Apollo567Kit (RiboBio, China). After Apollo staining, the slices were respectively incubated with DCX, NeuN or Nestin antibody (1:1000, 19483-1-AP, Proteintech, USA) overnight at 4 °C and incubated with FITC-conjugated IgG antibody (1:500, SA00003-2, Proteintech, USA) for 2 h. After DAPI (1:100) counterstaining, the sections were examined under a microscope (Leica, German), and the positive cells were analyzed using Image J software (Bethesda, USA).
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6

Immunohistochemistry of Alzheimer's Markers

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Tissue sections were deparaffinized in xylene and rehydrated in a gradient series of ethanol. The sections were heated in a citrate buffer (pH 6.0) in boiling water for 30 min for antigen retrieval. For blocking nonspecific staining, the slides were incubated with 1.5% normal horse serum (Vector Laboratories Inc., Burlingame, CA, USA) for 30 min, and then incubated with the following primary antibodies overnight at 4 °C: mouse anti-β-amyloid (6E10, 1:2000, sig-39320, Covance, Princeton, NJ, USA), anti-GFAP (1:1000, z0334, Dako, Carpinteria, CA, USA), and anti- Iba1 (1:1000, 019-19741, Wako, Osaka, Japan) antibodies. Subsequently, the slides were washed with 0.1% TritonX-100 PBS-T and incubated with biotinylated secondary antibodies (Vector Laboratories Inc.) for 30 min at room temperature. Slides were then incubated with an avidin–biotin–peroxidase complex (Vector Laboratories Inc.) for 30 min at room temperature. After incubation with diaminobenzidine (DAB, Vector Laboratories Inc.), images were obtained at 20× magnification using whole slide digital scanning with a digital pathology scanner (Aperio VERSA; Leica Biosystems, Richmond, IL, USA).
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7

Hippocampal Protein Expression Analysis

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The hippocampi were homogenized in a pro-prep solution (17081, iNtRon, Gyeonggi-do, Korea) after physically mincing. The protein concentration was quantified using the Bradford reagent (Bio-Rad, Hercules, CA, USA), and then denatured by boiling for 5 min, depending on the concentration of the sample. Each sample was separated by electrophoresis on 10–15% sodium dodecyl sulfate-polyacrylamide gels. Then, the proteins were transferred to a nitrocellulose membrane and blocked for 30 min with 5% bovine serum albumin (BSA) solution for nonspecific blocking. Membranes were incubated at 4 °C with anti-6E10 (1:1000, Sig-39320, Covance), anti-ADAM10 (1:1000, ab1997, Abcam, Cambridge, UK), anti-BACE (1:1000, sc-33711, Santa Cruz Biotechnology, Dallas, TX, USA), anti-GFAP (1:1000, ab53554, Abcam), anti-Iba1 (1:1000, ab15690, Abcam), or anti-β-actin (1:3000, #3700, Cell Signaling, Danvers, MA, USA). After overnight incubation, membranes were washed thoroughly in PBS-T buffer and incubated for 1 h with the corresponding secondary antibody diluted at 1:3000. The membranes were then washed, and immunoreactivity was detected using an enhanced chemiluminescence (ECL) kit (NEL105001EA, Perkin Elmer, Waltham, MA, USA).
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8

Quantification of Neuronal Protein Levels

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Cellular and cardiac samples were homogenized using RIPA cell lysis buffer (Thermo Scientific) enriched with phosphatases and protease inhibitors (Thermo Scientific). Then, the lysates underwent sonication and were centrifuged for 10 min at 4°C at 13,000 rpm to discard the insoluble debris. Next, total protein amounts were quantified via a dye-binding Pierce BCA protein assay kit (Thermo Scientific) and detected using a spectrophotometer reader (SpectraMax i3x Multi-mode Microplate Reader, Molecular Devices) at a wavelength of 512 nm. Equal yields of protein (20–40 μg) were separated through SDS-PAGE and identified by western blot analysis. Total lysates were used to evaluate the protein levels of NGF (AN-240; Alomone labs; 1:1000), BDNF (ANT-010; Alomone labs; 1:1000), GAP-43 (Millipore AB552; 1:1000), Cleaved Caspase-3- Asp175 (Cl-Casp-3- Cell Signaling- #94530; 1:200), dopamine β hydroxylase (DβH; AB1536; Millipore), human Aβ [mouse monoclonal anti-Aβ antibodies mixture composed of 4G8 epitope (residues Aβ18–22; SIG-39320; Covance) and 6E10 epitope (residues Aβ3–8; SIG-39220; Covance)], and GAPDH (sc-32233,6C5; Santa Cruz Biotechnology; 1: 2000), the latter which was used as the loading control. Protein bands were detected by using Odyssey® CLx Imaging System according to the manufacturer’s instructions and quantified with Image Studio Lite Software[26 (link)].
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9

Immunohistochemical Analysis of Alzheimer's Model Mice

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After behavioural tests, the brains of the wild‐type and APP/PS1 mice were removed and fixed in 4% paraformaldehyde (pH 7.4). The fixed brain samples were then immersed in 30% sucrose for cryoprotection and cut into 30‐μm‐thick slices using a Cryostat (Microm HM 525, Thermo Scientific, Waltham, MA, USA). The sliced brains were stained with 500 μM of thioflavin S (ThS) dissolved in 50% ethanol for 7 min. The sections were then rinsed with 100, 95, 70% ethanol and PBS successively. For immunostaining, the slides were stained with anti‐Aβ monoclonal antibody (1:100 dilution, clone 6E10, Catalog SIG‐39320, Covance), anti‐GFAP polyclonal antibody (1:300 dilution, Catalog AB5541, Millipore Corporation) and anti‐tau (phospho‐Ser199) antibody (1:100 dilution, Catalog ab81268, Abcam). Alexa Fluor 488‐ or Alexa Fluor 568‐conjugated secondary antibodies (Life Technologies) were used for fluorescence detection. Hoechst 33342 (Sigma‐Aldrich) was used for the visualization of nuclei. Images were taken on a Leica DM2500 fluorescence microscope (Li et al, 2007).
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10

Immunofluorescent Staining of Oligomeric Aβ

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Immunofluorescent staining of oligomeric Aβ by C6T and A4 was performed as follows. In brief, the human or mouse brain sections were incubated with purified scFv antibody A4 and C6T (1 μg/ml) at 4 °C overnight. Then, a rabbit anti-cMyc antibody (C3956; 1:1000 dilution; Sigma–Aldrich) was used to detect the cMyc tag on the C6T and A4 scFvs. Images were double stained with antibody 6E10 to label Aβ (SIG-39320; 1:2000 dilution; Covance) or an antibody against MAP2 as a neuronal marker (MMS-485P; 1:500 dilution; Covance). Sudan black was used for quenching nonspecific fluorescence of intracellular lipofuscin. A control using secondary antibody against Myc tag without the corresponding primary scFv was also performed (Fig. 1). Microglial cells were visualized with rabbit anti-ionized calcium-binding adaptor molecule 1 (Iba1) antibody (catalog no.: 019-19741; 1:500 dilution; Wako). The synapses were immunostained using a rabbit antibody against SYP (Santa Cruz; 1:100 dilution), and newborn neurons in the hippocampus were labeled with rabbit anti-DCX (Ab18723; 1:500 dilution; Abcam). Fluorescent-conjugated secondary antibodies were used to visualize the target structures. The endogenous lipofuscin was blocked with 0.3% Sudan black, and cell nuclei were labeled with 4',6-diamidino-2-phenylindole (Electron Microscopy Sciences).
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