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11 protocols using reporter lysis 5x buffer

1

Estrogen and Proteasome Modulation Assay

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All reagents were used as received unless otherwise stated. 17β-estradiol (E2) and MG-132 were purchased from Sigma-Aldrich. Dimethyloxalylglycine (DMOG) was purchased from Frontier Scientific. Cell culture medium and additives were purchased from Gibco, except for collagen I (rat tail, Corning), DMSO (Fisher Scientific), ethanol (Fisher Scientific), and fetal bovine serum (FBS, VWR). CellTiter-Glo, ONE-Glo, and Reporter Lysis 5X Buffer were purchased from Promega and used according to the manufacturer’s protocols.
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2

Measuring Luciferase Activity in Transfected Cells

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Cells harvested 24 h after transfection of the bicistronic pRF vector were lysed in 50 μl Reporter Lysis 5XBuffer (Promega). Luciferase activities of the samples were measured twice using the Dual-Luciferase Reporter Assay System (Promega) and luminometer according to the manufacturer's instructions.
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3

Measuring NFAT-driven Luciferase Activity

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Acinar cells were infected with Ad-NFAT-luciferase following a previously described procedure 10 (link), 15 (link), 16 (link). The construct includes a luciferase gene placed downstream of an IL-4 promoter which contains nine tandem NFAT binding sites 10 (link). Acinar cells were incubated with the NFAT-driven luciferase adenovirus for 1.5 hr prior to stimulation. All of the stated inhibitors were added for 30 min prior to stimulation with RC. NFAT-luciferase was measured using the luciferase assay system. Briefly, cells were spun at 1,000 rpm for 5 min, washed with PBS, and lysed using reporter lysis 5X buffer (Promega #E397A, Madison, WI). Samples were vortexed and spun at 12,000 g for 2 min. Supernatant was plated, and luminescence was measured using a Synergy H1 plate reader (BioTek, Winooski, VT) and normalized to total protein.
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4

Tan IIA and Sal B Modulate NF-κB Activity

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Cells (7.5×104 cells/well) were seeded in 24-well plates with FBS-free medium at 37°C the day before transfection. Transfection was performed with transfection reagent Fugene-6 (Roche, Basel, Switzerland) according to manufacturer's specifications. NFκB-Luc reporter construct (1 µg/well) (Stratagene, La Jolla, CA, USA) was added to cells along with plasmid CMV-β-galactosidase (CMV-β-gal, 0.2 µg/well; Promega, Madison, WI, USA) and transfection reagent (15 µl/24-well plate). CMV-β-gal served as an internal control to normalize the transfection efficiency. After 24 hr incubation, cell cultures were treated with Tan IIA (1, 3 and 10 µM) or Sal B (200 µM) for 30 min. LPS was then added to stimulate NF-κB activity for 6 hr. Cell lysates were harvested with diluted reporter lysis 5X buffer (Promega). 24-well plates were added reporter lysis buffer (100 µl/well), and 20 µl cell lysate mixed with 100 µl luciferin in white 96-well plates. Luminescence was detected by luminometer-VICTOR2 Multilabel Counter (Perkin Elmer Inc., Waltham, MA, USA), as previously reported by us [27] (link), [28] (link).
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5

Quantifying Cargo Expression in CAR-T Cells

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To evaluate gene-cargo expression levels for CAR- or TCR-T cells transduced with sense vs antisense lentiviral vectors containing luciferase as the inducible gene cargo under 6xNFAT, 2.5 × 104 UTD and transduced T cells were co-cultured with target tumour cells at 1:1 E:T ratio for 24 h in 96-well plates. The following day, the culture media were washed away and 10 µl per well of opportunely diluted Reporter Lysis 5X buffer (Promega) was added and the cells resuspended. Luciferin (50 µl per well) (PerkinElmer) was then added and cell lysates were transferred into white 96-well white optiplates (PerkinElmer) for bioluminescence acquisition. Luciferase activity was measured by total counts acquired using the HIDEX sense 425-301i plate reader and software (Hidex).
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6

Acinar Differentiation and NF-κB Activation

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AR42J cells were differentiated towards an acinar phenotype by administering dexamethasone (100 nM) for 48–72 hr 17 (link). AR42J cells were infected with Ad-NF-κB-luciferase 16 h prior to stimulation using a previously described method12 (link). Following a wash with DMEM/F12 medium, acinar cells were evenly distributed in a 48-well plate and incubated for 30 min at 37°C. They were incubat ed with RC at varying concentrations and times. NF-κB-luciferase was measured using a commercially available luciferase assay (Promega, Madison, WI). Briefly, cells were spun at 1,000 rpm for 5 min, washed with PBS, and lysed using reporter lysis 5X buffer (Promega, catalog no. E397A). Samples were vortexed and spun at 12,000 × g for 2 min. The supernatant was plated, and luminescence was measured using a Synergy H1 plate reader (BioTek, Winooski, VT) and normalized to total DNA.
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7

HEK293T Cell Signaling Assay

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HEK293T cells were maintained at 37°C and 5% CO2 in DMEM, containing 10% FBS (HyClone) and 100 mg ml-1 penicillin-streptomycin. In general, siRNA was transfected using transfection reagent (Dharmacon, T-2001-02) following manufacturer’s protocol, and asprosin was overexpressed using Ad5-Asprosin or Asprosin coding mammalian expression plasmid with Ad5-empty or CMV6-Entry-empty as controls. For luciferase readout, HEK293T cells were transduced with 4xM67 pTATA-TK-Luc (Addgene; 8688) plasmid. HEK293T cell transfection, lysis and luciferase readouts were done with Fugene HD transfection reagent (Promega; E2312), Reporter Lysis 5X Buffer (Promega, E3971) and Luciferase Assay Reagent (Promega, E1483), respectively, using standard manufacturer’s protocol.
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8

Reporter Assay in A549 and H1299 Cells

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For the reporter assay, A549 or H1299 cells transfected with reporter or mock plasmids were lysed in Reporter Lysis 5X buffer (Promega, Madison, WI, USA). Renilla and firefly luciferase activities were determined by using the Dual-Luciferase® Reporter Assay System (Promega, Madison, WI, USA) according to the manufacturer’s instructions.
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9

Measuring HIF-1 Activity in Cell Lines

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MCF-7, Hep3B and U2OS cells were used to measure HIF-1 activity in reporter gene studies. Cells were allowed to grow on 24-well plates before they were transiently transfected with a hypoxia-responsive luciferase plasmid which contains six HIF-1 binding sites from the transferrin 3′ enhancer.37 (link) Empty control vector (pGL4 vector, Promega, Mannheim, Germany) served as transfection control. Medium was renewed 24 hrs after transient transfection. Cells were pre-treated with 0.1 or 1.0 µM selinexor or DMSO for 1 hr before incubation in normoxia (20% O2) or hypoxia (1% O2) for 24 hrs. After incubation, lysis was performed using Reporter Lysis 5X Buffer (Promega). Luminescent signal intensities were analyzed with the Luciferase Assay System (Promega) using a MicroLumat LB 96P Plate Reader (Berthold Technologies, Bad Wildbad, Germany). Bio-Rad DC Protein Assay (Bio-Rad, München, Germany) was used for determination of protein concentrations. Firefly luciferase (FL) activities were normalized to protein concentrations. Three technical replicates were analyzed.
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10

SARS-CoV-2 Pseudovirus Infectivity Assay

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Pseudoviruses were titrated and normalized to ensure that the same numbers of virus particles were used for infectivity test before infected into HCC15 receptor stable cells, which are highly susceptible to SARS-CoV-2 infection (unpublished data). Pseudovirus-infected cells were lysed at 72 h post-infection for 5 min on ice with chilled Reporter Lysis 5X Buffer (Promega, USA), and then precipitated by centrifugation (at 15,000 RPM for 15 min at 4°C). 25 ul of each lysate was transferred to a new tube, and mixed with 25ul of Luciferase buffer containing luciferase substrate (Luciferase Assay System, Promega).
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