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34 protocols using lsm 800 meta

1

Golgi and Lysosome Visualization in Oocytes

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To detect Golgi apparatus, we first removed the zona pellucida by incubating the oocytes with 1% pronase for 4 min. The live oocytes were then incubated in M2 medium at 4 °C for 30 min with Golgi-Tracker Red (1:100) (C1043; Beyotime Biotechnology Shanghai, China). We incubated the oocytes with M2 at 37 °C for 30 min after washing them three times with fresh culture media. Finally, we used a confocal laser-scanning microscope (Zeiss LSM 800 META, Zeiss, Berlin, Germany) to analyze the oocytes.
Similarly, lysosome Red (1:10,000) (C1046; Beyotime Biotechnology, Shanghai, China) was used to identify lysosomal distribution in live oocytes treated with M2 medium at 37 °C for 30 min. The oocytes were cleaned three times before being examined by a confocal laser scanning microscope (Zeiss LSM 800 META; Zeiss, Berlin, Germany).
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2

Dendritic Cell Uptake of OVA

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Spleen cells (4 × 106 cells) were incubated for 4 h with FITC-labeled OVA (OVA-FITC) (50 μg/ml, Thermo Fisher Scientific) in the presence or absence of GTS-21 (30 μM). To observe OVA-FITC uptake using confocal microscopy, the cells were plated onto poly-d-lysine-coated glass-bottom dishes, fixed with 4% paraformaldehyde for 20 min at 4°C, and permeabilized and blocked with Blocking One (Nacalai tesque) containing 0.5% Triton X-100 for 1 h at room temperature. The cells were then incubated with PE-conjugated anti-CD11b and APC-conjugated anti-CD11c Abs for 20 min at 4°C. Nuclei were stained with DAPI (300 nM) for 10 min at room temperature. Cells were imaged using a confocal microscope (Zeiss LSM 800 Meta, Carl Zeiss, Inc., Germany) equipped with an oil-immersion objective (40 × , NA = 1.3). Fluorescence images were processed using ImageJ 1.37a (National Institutes of Health). For flow cytometric analysis, spleen cells were stained with PE-conjugated anti-CD11b and APC-conjugated anti-CD11c Abs for 20 min at 4°C and subjected to flow cytometry.
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3

Immunofluorescence Analysis of hPDLSCs

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hPDLSCs, at the second passage, treated and untreated with the mixture (CBD and MOR) were fixed and processed for immunofluorescence staining as reported by Diomede et al. [43 (link)]. Cells were incubated with mouse primary monoclonal antibody anti-GAP43 1:200 (Sigma Aldrich, Milan, Italy), rabbit anti-Nestin 1:200 (Santa Cruz Biotechnology, Inc., Dallas, TX, USA), rabbit anti-BDNF 1:100 (Santa Cruz Biotechnology), and mouse anti-GFAP 1:100 (Santa Cruz Biotechnology) and mouse anti-GFAP 1:100 (Santa Cruz Biotechnology), followed by anti-mouse Alexa Fluor 488 (Molecular Probes, Life Technologies, Monza, Italy) and anti-rabbit Alexa Fluor 568 (Molecular Probes), respectively.
All samples were incubated with Alexa Fluor 568 phalloidin red fluorescence conjugate (1:400), as a marker of the cytoskeleton actin and with TOPRO to highlight the nuclei [44 (link)]. Samples were observed using a CLSM (Zeiss LSM800 META, Zeiss, Jena, Germany). After treatment the percentages of GAP43/Nestin/BDNF/GFAP-positive cells were quantified based on the 15 images collected randomly. Experiments have been carried out in triplicates on cells derived from three different donors.
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4

Neurogenic Marker Visualization through Confocal Microscopy

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All samples were treated to highlight neurogenic-specific markers for subsequent
observation with confocal laser scanning microscopy. The primary antibodies were mouse
anti-GAP43 (1:100; Sigma Aldrich, Milan, Italy) and rabbit anti-Nestin (1:200; Santa Cruz
Biotechnology, Dallas, TX, USA). Samples were incubated with secondary antibodies Alexa
Fluor 488 (Molecular Probes, Life Technologies, Monza, MI, Italy) at RT for 1 h22 (link). All samples were incubated with Alexa Fluor 568 phalloidin red fluorescence
conjugate (1:400) to stain the cytoskeleton actin and with TOPRO to stain nuclei23 (link). Samples were observed by means confocal laser scanning microscopy (Zeiss LSM800
META, Zeiss, Jena, Germany).
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5

Visualizing Mitochondria and ER in Oocytes

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The distribution of mitochondria and the ER in living oocytes was detected by Mito-Tracker Red CMRos (1:600) (Cat# M7512, Invitrogen, Eugene, OR, United States) or ER-Tracker Red (1:500) (C1041 Beyotime Biotechnology Shanghai, China) in an M2 medium at 37°C for 30 min. Then we washed the oocytes three times and scanned the live oocytes with a laser confocal microscope by Zeiss LSM 800 META.
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6

Fluorescence Microscopy of Engineered Diatom Cells

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RNA isolation and cDNA synthesis were carried out according to standard procedures [26 (link)]. PtFucTs sequences were fused to the upstream of eGFP and cloned into pPha-NR vector (GenBank: JN180663) via EasyGeno kit (Tiangen, Biotech Co., China). During the fusion, the stop codon of PtFucTs was deleted. The primers were designed via the EasyGeno Primer website (http://123.56.75.195/#enidx). pPha-NR-PtFucTs-eGFP plasmids were transfected into P. tricornutum cells on the 5th day of culture. Afterwards, the clones were analyzed with confocal laser scanning microscope (LSM 800 Meta, Carl Zeiss, Germany). An argon laser at 488 nm was used to activate the fluorescence of eGFP and plastid autofluorescence. While the fluorescence was detected at bandwidths of 500–520 nm (green fluorescence of eGFP), 580–600 nm (magenta fluorescence of mRFP) and 625–720 nm (red fluorescence of plastid), respectively [21 (link)]. All primer sequences used in this paper were shown in Additional file 2: Table S1.
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7

Lysosome Distribution in Oocytes

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Lysosome Red (1:10,000) (C1046 Beyotime Biotechnology Shanghai, China) was used to detect the distribution of lysosome in living oocytes, which were incubated with an M2 medium at 37°C for 30 min. The oocytes were washed three times and then examined by a confocal laser-scanning microscope (Zeiss LSM 800 META, Germany).
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8

Immunofluorescence Imaging of Embryos

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The embryos were immobilized with 4% (w/v) paraformaldehyde in PBS 1 h and then permeabilized with 1% Triton X-100 (in PBS) for 15 min at room temperature, where after blocked by blocking buffer (1% BSA-addition of PBS) 1 h at room temperature. For anti-α-tubulin-FITC and anti-gamaH2A.X staining, embryos were incubated with primary antibodies (anti-α-tubulin-FITC, 1:100; anti-gamnaH2A.X, 1:200) overnight. The embryos were further incubated with corresponding secondary antibodies (Alexa Fluor 594 bound goat anti-rabbit antibody, 1:200) for 1 h at room temperature. Then, the embryos were stained with Hoechst 33342 (10 mg/mL in PBS) for 15 min and samples were mounted on glass slides. Finally, the embryos were examined with a confocal laser-scanning microscope (Zeiss LSM 800 META, Germany). Fluorescence intensity was analyzed by image J software. To avoid errors, the embryos of the treatment and control groups were sealed on a sheet of glass and scanned with the same parameters to standardize different replicates. Average fluorescence intensity per unit area of the target region was calculated using image J. When the fluorescence intensity is counted, the embryos with extremely strong and weak fluorescence intensity are excluded. The average fluorescence intensity of all embryos was used as the final average fluorescence intensity.
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9

Phenotypic Characterization of hUCMSCs

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Surface markers on hUCMSCs were analyzed by flow cytometry. After trypsinization, approximately 1 × 106 cells were fixed with 4% paraformaldehyde for 20 min at room temperature. Collected cells were then incubated with indicated PE-conjugated antibodies CD13, CD29, CD31, CD34, CD44, CD45, CD73, CD117, HLA-ABC, and HLA-DR (eBioscience, Shanghai, China) at room temperature for 2 h. Control samples were incubated with PE-conjugated mouse IgG1 isotype antibodies. After incubation, cells were washed with PBS and centrifuged to remove unbound antibodies. Cells were resuspended in 1 ml PBS and analyzed by flow cytometry using the Accuri C6 cytometer (BD, Franklin Lakes, NJ). Surface markers on PMVs were measured by fluorescence staining. PMVs from hUCMSCs were adhered to a 35-mm glass-bottom dish (In Vitro Scientific, Sunnyvale, CA), fixed with 4% paraformaldehyde, and incubated with the above PE-conjugated antibodies at room temperature for 2 h. After washing, PMVs were examined and photographed under a confocal microscope (LSM 800 Meta, Carl Zeiss, Germany).
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10

Visualizing Intracellular Oxidative Stress

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4.5 × 104 CT26 cells were seeded in µ‐Slide 8 well (Ibidi, USA) for 24 h and then treated with 100 × 10−9m of HP, FHP‐1, and FHP‐2. After 24 h, the cells were washed with PBS prior to incubation with 10 × 10−6m of DCF‐DA at 37 °C for 30 min. Following washing with PBS, the cells were stained with ER‐Tracker Red (500 × 10−9m, Invitrogen Co.) at 37 °C for 30 min. The stained cells were washed with PBS containing Pluronic F‐127 (0.1%) and visualized with confocal laser scanning microscopy (LSM 800 META, ZEISS, Germany).
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