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Rabbit anti cleaved caspase 3 antibody

Manufactured by Cell Signaling Technology
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The Rabbit anti-cleaved caspase-3 antibody is a primary antibody that recognizes the cleaved form of caspase-3 protein. Caspase-3 is a key executioner enzyme in the apoptosis (programmed cell death) pathway.

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49 protocols using rabbit anti cleaved caspase 3 antibody

1

Immunofluorescence Analysis of Vascular Endothelial Cells and Apoptosis

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Fixed specimens were embedded in OCT compound (Sakura Finetek, Tokyo, Japan) and sectioned (10-μm thick slices). For immunofluorescence analyses, rat anti-CD31 antibody (1/200) (BD Biosciences, San Diego, CA, USA) was used to stain vascular endothelial cells and rabbit anti-cleaved caspase-3 antibody (1/200) (#9579, Cell Signaling Technology, Danvers, MA, USA) to stain apoptotic cells. Anti-rat IgG Alexa Fluor 488 and anti-rabbit IgG Alexa Fluor 546 (Invitrogen, Carlsbad, CA, USA) were used as secondary antibodies. Samples were visualized using a Leica DM5500B and processed with the Leica application suite (Leica Microsystems, Bensheim, Germany). All images shown are representative of more than 3 independent experiments. Vessels and apoptotic cells were counted in more than 3 different fields in each tumor at a magnification of ×100.
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2

Inhibition of JNK Signaling in Immune Cells

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We purchased JNK inhibitor SP600125 from Cayman Chemical (Ann Arbor, MI, USA), and transforming growth factor alpha (TGF‐α) from R&D Systems (Minneapolis, MN, USA). Primary antibodies used in immunohistochemical and immunofluorescence assays included rabbit anti‐phospho‐JNK antibody (1:50; Cell Signaling Technology, Danvers, MA, USA), rat anti‐mouse CD45 antibody (1:50; BD Biosciences, San Jose, CA, USA), rat anti‐mouse F4/80 antibody (1:100; eBioscience, San Diego, CA, USA), rabbit anti‐Ki‐67 antibody (1:100; Abcam, Cambridge, UK), mouse anti‐α‐smooth muscle actin (α‐SMA) antibody (1:50; Santa Cruz, Santa Cruz, CA, USA), biotin hamster anti‐mouse CD11c antibody (1:100; BD Biosciences), rabbit anti‐cleaved caspase3 antibody (1:1600; Cell Signaling Technology) and rabbit anti‐CD8 antibody (clone EP1150Y, 1:250; Epitomics, Burlingame, CA, USA). Primary antibodies used in immunoblotting analysis included rabbit anti‐phospho‐JNK antibody (1:1000; Cell Signaling Technology), rabbit anti‐JNK antibody (1:1000; Cell Signaling Technology), rabbit anti‐phospho‐Stat3 antibody (1:2000; Cell Signaling Technology) and mouse anti‐Stat3 antibody (1:1000; Cell Signaling Technology).
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3

Apoptosis Induction and Signaling Pathway

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Soluble human recombinant FasL (rhFasL) (Kamiya Biomedical Company, Seattle, WA); staurosporine (ACROS Organics, Pittsburgh, PA); caspase 8 inhibitor II (EMD Millipore, Billerica, MA); protein G-agarose (Roche Diagnostics, Indianapolis, IN); Z-FA-FMK (negative control for caspase inhibitors), FITC Rat anti-mouse CD90.2, FITC Rat IgG1, κ Isotype, Annexin V apoptosis detection kit and APO-Direct kit (BD Pharmingen, San Jose, CA); rabbit anti-PARP antibody, rabbit anti-caspase 3 antibody, rabbit anti-cleaved caspase 3 antibody, rabbit anti-cleaved caspase 8 antibody and rabbit anti-cleaved caspase 9 antibody (Cell Signaling Technologies, Danvers, MA); anti-mouse Thy-1 (AbD Serotec, Oxfordshire, UK), and anti-α actin polyclonal antibody (Santa Cruz Biotechnology, Dallas, TX).
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4

Immunohistochemical Detection of Cleaved Caspase-3

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Paraffined sections were rehydrated and washed in 0.01-M phosphate buffered saline (PBS). Then, they were incubated over night at 4°C with a rabbit anti-cleaved caspase-3 antibody (Cell Signalling Technology, Inc., Danvers, USA) at 1∶300 dilution. Then, ocular sections were washed in PBS and incubated with the specific secondary antibody biotinylated anti-rabbit IgG (1∶100) (Vector Laboratories, Burlingame, USA). Once washed in PBS, a streptavidin Alexa Fluor 488 conjugate (Molecular Probes-Life Technologies, Grand Island, USA) at 1∶100 dilution was used to detect cleaved caspase-3 immunolabelling; the incubation was made over night at 4°C. Nuclear counterstaining with Hoescht stain solution (Sigma-Aldrich Chemie, Buchs, Switzerland) was performed for microscopic analysis with the laser scanning confocal microscope (TCS SP2; Leica Microsystems, Wetzlar, Germany). Negative control was carried out by omitting the primary antibody. Specific labeling of cleaved caspase-3 antibody in mouse jejunal paraffin sections was used as positive control.
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5

Mammosphere Proliferation and Apoptosis Assay

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Immunofluorescent staining of Ki67 and cleaved caspase 3 (CC3) was performed to phenotype our mammospheres based on proliferation (Ki67 staining) and apoptosis (CC3 staining) levels. Mammospheres were centrifuged (5 min, 1500G) onto poly-D-lysine coated coverslips (Neuvitro H-12-1.5-PDL). Cells were fixed with 4% paraformaldehyde (ThermoFischer 28908) in PBS for 10 minutes, permeabilized with 0.05% Triton-X-100 (Sigma X-100) for 20 minutes, and then non-specific binding was blocked with 10% normal goat serum (Invitrogen PCN5000) for one hour. To detect Ki67, cells were incubated with an anti-Kit67 antibody conjugated to Alexa Fluor 488 (1:100 dilution; BD Pharmingen #561165). To detect cleaved caspase-3, cells were incubated with rabbit anti-Cleaved caspase 3 antibody (1:300; Cell Signaling Technologies 9661), followed by a goat anti-rabbit secondary antibody conjugated to Alexa Fluor 568 (1:200; ThermoFischer #A-11011). Following incubation with antibodies, cells were mounted with ProLong® Gold Antifade Reagent with DAPI (Cell Signaling Technology 8961).
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6

Immunostaining of Tumor Caspase-3

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Animals were killed 25 days after inoculation, and their tumors were embedded in the OCT compound (Sakura Finetek, Torrance, CA, USA) and stored at −80 °C. Frozen sections (10 μm thick) were fixed in 4% paraformaldehyde/phosphate-buffered saline and subjected to immunostaining. Immunostaining was performed using a rabbit anticleaved caspase-3 antibody (Cell Signaling Technology), as described previously [39 (link)]. The nuclei were counterstained with Hoechst 33342, and the sections were observed by confocal microscopy (Carl Zeiss, Oberkochen, Germany).
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7

Immunohistochemistry for Cleaved Caspase-3

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Immunohistochemistry for cleaved caspase-3 was done as explained next [6 (link),17 (link)]. The sections were treated with rabbit anticleaved caspase-3 antibody (1:500; Cell Signaling Technology, Inc.) during overnight, and then incubated with biotinylated rabbit secondary antibody (1:200; Vector Laboratories) for another 1 hour. After amplification of the secondary antibody with the Vector Elite ABC kit (1:100; Vector Laboratories), 0.03% diaminobenzidine was used to visualized the antibodybiotin-avidin-peroxidase complex.
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8

Apoptosis Induction and Quantification

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After 24 h and 48 h, uninfected and infected HeLa cells were collected after trypsinization and resuspended in REPA buffer (50 mM Tris, 150 mM Nacl, 0.1% SDS, 0.5% Sodium Deoxycholate, 1% Triton X100, 1 mM PMSF) containing 1x protease inhibitor cocktail (Sigma) to lyse the eukaryotic cells. The lysate was then loaded onto SDS-PAGE gels and transferred to a PVDF membrane (Millipore) through Western blotting. Blots were blocked using 5% non-fat milk (Carl Roth) and probed with rabbit anti-cleaved caspase 3 antibody (1:1000) (Cell Signalling) or rabbit anti-vinculin antibody (1:1000) (Santa Cruz Biotech). After incubating with horseradish peroxidase-conjugated rabbit IgG secondary antibody (Abcam), blots were processed using the enhanced chemiluminescence (ECL) Western blotting detection system (Millipore). Images were taken using Gel Doc™ XR+ System (Bio-Rad). Bands were quantified using ImageJ software (National Institutes of Health, USA) and normalised against loading control (vinculin). Mean optical density values were plotted using GraphPad Prism 5 (Graphpad Software).
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9

Western Blot Analysis of Post-Stroke Proteins

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Perihematomal tissues from the ipsilateral hemisphere were homogenized and centrifuged, then separated using SDS-poly-acrylamide gel electrophoresis, and transmitted to nitrocellulose membranes. Next, we blocked the membrane with defatted milk (5%) for 1 h and incubated it overnight at 4 °C with the following primary antibodies: rabbit anti-HDAC6 antibody (1:2,000, #ab239362; Abcam, Cambridge, UK), mouse anti-ace-α-tubulin (1:2,000, #ab24610; Abcam, Cambridge, UK), rabbit anti-cleaved caspase-3 antibody (1:1,000, #9661; Cell Signaling Technology, Danvers, MA, USA), rabbit anti-Bax antibody (1:1,000, #ab32503; Abcam, Cambridge, UK), rabbit anti-Bcl-2 antibody (1:1,000, #ab196495; Abcam, Cambridge, UK), or mouse anti-β-actin antibody (1:5,000, #66009-1-Ig; Proteintech, Chicago, IL, USA). Corresponding secondary antibodies were chosen to incubate for 90 min. The data were analyzed using Image J software.
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10

Western Blot Analysis of PARP and Caspase-3

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PolyADP-ribose polymerase (PARP) and caspase-3 cleavage were assessed using a standard western blotting protocol [17] (link). Membranes were probed using polyclonal rabbit anti-PARP1 antibody (Abcam, Cambridge, Cambridgeshire, UK; 1∶1000), a rabbit monoclonal anti-ERCC1 antibody (Cell Signaling Technology, Danvers, MA, USA; 1∶1000) and a polyclonal rabbit anti-cleaved caspase-3 antibody (Cell Signaling Technology; 1∶1000). A rabbit anti-actin antibody (Sigma-Aldrich Co. Ltd; 1∶2000) was used as a loading control. Blots were scanned (Bio-Rad GS-800 Calibrated Densitometer; Bio-Rad, Hercules, CA, USA) and signal quantification was performed by densitometry using scanning analysis software (Quantity One; Bio-Rad).
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