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Edta solution

Manufactured by Merck Group
Sourced in United States, Germany, Sweden

EDTA solution is a common laboratory reagent used to chelate metal ions. It acts as an anticoagulant by binding to calcium ions, which are necessary for the blood clotting process. EDTA solution is often used in various analytical and research applications, such as sample preparation for elemental analysis and DNA extraction.

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66 protocols using edta solution

1

Quantitative Analysis of Cartilage Composition

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Cadavers were thawed at room temperature. The proximal epiphyses of the left humerus and femur (total number of specimens = 32) were separated from the remaining bone and fixed in buffered 10% formalin (Bio-Optica, Milan, Italy) for 24 h as a whole. Samples were decalcified with 45% formic acid (Sigma Chemical Co., St. Louis, MO, USA), for 2-3 days and then with 15% 0.5 M EDTA solution (pH 8.0 - Sigma) for 7-10 days14 and embedded in paraffin. Serial sections (4 μm thickness) were mounted on glass slides. Sections corresponding to the sagittal median plane of each proximal epiphysis were stained with standard Hematoxylin-Eosin (HE), Masson’s Trichrome (MT) and Safranin-O (SO) (Bio-Optica) in order to follow ossification progression. Quantitative analysis of CCs was performed on both HE and MT stained sections, with the Olympus DP-software program at 20x magnification: the area corresponding to the sagittal median plane of each proximal epiphysis was measured, and the number of CCs in each of them contained calculated for each dog (total CCs: humerus vs femur; green (immature collagen fibers) or red (mature collagen fibers) CCs: humerus vs femur).
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2

Cell Culture of Human Rhabdomyosarcoma and Mouse Normal Cell Lines

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The human rhabdomyosarcoma (RD) cancer cell line and the mouse (LB20) normal cell line were cultured in a humid environment at 37°C and 5% CO2 in Eagle's minimum essential medium supplemented with 10% fetal bovine serum and 1% streptomycin/penicillin. At 90% confluence, the cells were harvested using 0.25% trypsin/0.53 mM EDTA solution (Sigma-Aldrich, USA) and subcultured onto 96 well plates.
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3

Culturing and Sorting CNE-2 Cell Line

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The CNE-2 cell line was presented from Prof. Yunfei Xia at Sun Yat-sen University Cancer Center (Guangzhou, China)21 (link). CNE-2 cell was cultured in RPMI-1640 medium (Hyclone, Logan, UT, USA) with 10% fetal bovine serum (Hyclone), 100 units/ml penicillin and 100 mg/ml streptomycin (Hyclone). The Sorting of cell populations was referred to a previously reported method 22 (link). Sorted CNE-2s cell was cultured in DMEM/F12 (1:1) medium (Hyclone) with 20μg/L EGF (PeproTech, Rocky Hill, USA), 20μg/L bFGF (PeproTech) ,2% B27(no vitamin A, Gibco, Carlsbad, Calif, USA),100 units/ml penicillin and 100 mg/ml streptomycin (Hyclone). All the two cell lines were cultured in a 37℃ incubator (Sanyo, Japan) with 5% CO2. Cells were digested by 0.25% trypsin and 0.02% EDTA solution (Sigma, St. Louis, MO, USA).
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4

Anethole Cytotoxicity on Gingival Cells

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Normal and cancer gingival cells (3 × 105 cells/well) were seeded in 6-well plates and cultured for 24 h. Cells were then exposed or not to various concentrations of anethole for 24 h, then sued to assess the cell growth by means of MTT colorimetric assay (Sigma-Aldrich) as described by Semlali et al.20 (link) Briefly, each culture was supplemented with 10% of MTT (5 mg/mL) and incubated for 3 h at 37 °C. Stained cells were then lysed using 1 mL of isopropanol-HCl 0.05 M solution with agitation for 15 min. Then, 4 × 200 µL of lysis solution were transferred to a 96-well plate and the absorbance was measured at the wavelength of 550 nm using an iMark microplate reader (Bio-Rad, Mississauga, ON, Canada). Cell proliferation levels were determined by means of the following formula: % of cell viability = [(OD 550 nm (treated cells) − OD (Blank))/(OD (control cell) − OD (Blank))] × 100, n = 7. With another set of experiments, anethole treated and non-treated gingival cells were detached by means of 0.05% trypsin: 0.1% EDTA solution (Sigma-Aldrich, Oakville, ON, Canada) and resuspended in fresh culture medium. The level of living cells in each culture was determined by means of the trypan blue exclusion assay, as described previously21 (link).
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5

Isolation of Neutrophils from Human Blood

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Fresh peripheral venous blood was collected from healthy volunteers via the Regional Blood Donation Center (Krakow, Poland), which complies with the requisite confidentiality assurances for human participants. Thus, the current work adheres to appropriate exclusions from human subjects’ approval. The blood sample was diluted in 5 mM EDTA solution (Sigma) and centrifuged at 300 g for 15 min to remove the plasma layer. The remaining suspension was diluted with Mg2+- and Ca2+-free phosphate-buffered saline (PBS) (Biowest, Nuaille, France) and overlaid on the lymphocyte separation medium (Biowest). After centrifugation at 300 g for 30 min, the pellet-containing neutrophils and red blood cells (RBCs) were subjected to 1% polyvinyl alcohol (Sigma) sedimentation to separate the RBCs from the neutrophils. Residual RBCs were lysed by Red Blood Lysis Buffer (Roche, Penzberg, Germany) and then washed with PBS. The number of cells was determined using a Bürker chamber. The neutrophils’ purity was assessed routinely by forward- and side-scatter flow cytometric analyses. This neutrophil isolation procedure yields a >95% pure population of the cells.
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6

Quantifying Deferoxamine in MSC Secretomes

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Presence of DFX in the MSC secretomes was evaluated by High Performance Liquid Chromatography (HPLC) based on a modified method reported by DeFrancia et al. [29 ]. A VWR Hitachi LaChromElite chromatographic system equipped with autosampler, column oven adjusted to 25°C, and a UV-DAD detector adjusted to 430nm was used. In order to prevent metal interference, the entire system was previously purged with a 20mM EDTA solution (Sigma-Aldrich). Deferoxamine was evaluated in samples of the MSC secretome before the washing steps and after the first and second washing steps. For this, 50μl of each sample were first complexed with 50μl of a 3mM ferric chloride solution (Sigma-Aldrich). Samples were incubated for 5 minutes to obtain the ferroxamine form and 5μl of this solution were injected into the chromatographic system with a mobile phase consisting of 15% methanol in an aqueous solution containing 0,5% triethylamine adjusted to pH 8.3. Samples were separated on a Kromasil® C18 column (4,6 x 100 mm) with 3.5μm particle size through a flow rate of 0.8ml/min. Signals were quantified using a six point DFX standard calibration curve from 10μM to 2000μM (r2 0.998).
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7

Tumor-Bearing Tibia Decalcification and Sectioning

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Tumor-bearing tibias were decalcified in 10% EDTA for two weeks. EDTA solution (Sigma-Aldrich) was changed to fresh every 4–6 days. After decalcification, the samples were embedded in paraffin and cut longitudinally to 5 µm thin sections. The tibias were cut through, and the sections were stained from 5 different levels with hematoxylin-eosin (HE) to visualize tumor cells.
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8

Collecting Maternal and Neonatal Saliva

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On the first day of hospitalization, the pregnant women were interviewed, submitted to oral cavity examination, and non-stimulated saliva collection. Saliva of neonates was collected shortly after birth and prior to any contact with the mother, including the first breastfeeding, to avoid contamination with non-salivary components. Saliva samples were collected using sterile polypropylene transfer pipettes. A 250mM EDTA solution, pH 5.2 (Sigma, St Louis, MO, USA) was added to each sample prior to transport on ice to the laboratory, where they were stored at - 80ºC until analysis.
Samples of colostrum were collected by manual expression into sterile polypropylene Falcon tubes, on the first day of lactation. After collection, the samples were transported on ice to the laboratory, centrifuged at 1,300g, for 5 minutes, and stored at -80ºC until the laboratorial procedures.
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9

Microflocculation Method for Cell Counting

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Flocculation was determined using the microflocculation method (21 (link)). Total cell number was calculated by extrapolation of the absorbance values obtained in each standard cell curve, and the number of flocculent cells was calculated by subtracting the number of cells that remained in the suspension after stopping the agitation, according to Ogata (28 (link)). As a negative flocculent control, the assay was conducted using deionized water instead of EDTA solution (Sigma-Aldrich, Merck). Experiments were performed in triplicate.
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10

In vitro Cytotoxicity of Macrophages

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The in vitro toxicological study was conducted in a phagocytic cell line murine, RAW 264.7 (mouse leukaemic monocyte macrophage cell line, cultures from ECACC (European Collection of Authenticated Cell Cultures) supplied by Sigma 85062803).
The macrophage cell line was grown in Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum, 2 mM L-glutamine, penicillin (100 UI/ml) and streptomycin (100 μg/ml) and maintained at 37°C in a humidified atmosphere (95%) under 5% CO2. Cells were seeded at approximately 10,000 cells/cm2 and passaged every 3±4 days as necessary; they were finally removed from the plates with 0.05% trypsin-0.02% EDTA solution (all cell material was purchased from Sigma-Aldrich).
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