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G2 s qtof

Manufactured by Waters Corporation
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The G2-S QTOF is a high-resolution quadrupole time-of-flight mass spectrometer designed for accurate mass and structural analysis of a wide range of sample types. This instrument utilizes advanced ion optics and detection technologies to provide high-sensitivity and high-resolution mass measurements.

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5 protocols using g2 s qtof

1

GC-QTOF Analysis of Derivatized Samples

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The derivatized samples were analyzed with an Agilent 7890A GC system (Agilent, Santa Clara, CA, USA) coupled to a quadrupole TOF mass spectrometer, G2-S QTOF (Waters Corporation, Manchester, UK), operating in APGC mode. The GC separation was performed using a fused silica DB5-MS capillary column (30m x 250μm I.D., 0.25μm film thickness; J&W Scientific, Folson, CA, USA). The initial GC oven temperature was 70°C. One min after injection, the GC oven temperature was increased with 15°C/min to 320°C and held for 4 min at 320°C. Splitless injections of 1 μL using a straight empty deactivated liner from Restek were carried out at 240°C. Helium was used as carrier gas at 2.0 mL/min. The interface temperature was set to 250°C using N2 as auxiliary gas at 400 L/h, and cone gas at 150 L/h. The APCI corona pin was operated at 3.0 μA. The APGC source was operated in proton transfer mode by placing an uncapped vial with water (modifier) in a specially designed holder located in the source door (REF). The QTOF detection was operated in full-scan mode (m/z 50–650) with the resolution at ~20,000.
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2

Characterization of (-)-5-demethoxygrandisin B

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The assessment of (-)-5-demethoxygrandisin B at 100 ppm in methanol: H2O (80:20) was conducted using a Xevo® G2-S QTof coupled with an ACQUITY Ultra Performance LC™ system (Waters Corp., Milford, MA, USA). The ionization source was configured with a desolvation gas flow (N2) at 600 L/h and a desolvation temperature of 150 °C. The cone gas flow (N2) was set at 50 L/h, and the source temperature was maintained at 120 °C. Adjustments were made to the capillary and sampling cone voltages, setting them at 1.0 kV and 40 V, respectively. The data acquisition was executed utilizing MassLynx 4.1 software (Waters, Milford, USA) [19 (link),20 (link)]. NMR 1D (1H and 13C) and 2D homonuclear-correlated spectroscopy (COSY 1Hx1H), HMBC, and HSQC analyses were acquired with a Bruker 400 spectrometer AscendTM (Rheinstetten, Germany) model at 400.15 MHz (1H) and 100.62 MHz (13C). The chemical shifts were determined relative to CDCl3 at 0 ppm. A total of 20 mg of (-)-5-demethoxygrandisin B was solubilized in 600 μL of CDCl3. TopSpin 3.6.0 software was used for data control and processing. Thereby, the spectra were manually evaluated. The optical rotation of the (-)-5-demethoxygrandisin was measured on a Perkin–Elmer 341 polarimeter (Perkin–Elmer Inc., Waltham, MA, USA).
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3

Protein Characterization by UPLC-MS

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Mass spectra of intact proteins were obtained using a Xevo G2-S QTOF on a Waters ACQUITY UPLC Protein BEH C4 reverse-phase column (300 A, 1.7 μm, 2.1 mm × 50 mm). An acetonitrile gradient from 5 %-95 % was used with 0.1 % formic acid, over a run time of 5 min and a constant flow rate of 0.5 mL/min at 40 °C. The spectra were deconvoluted using MaxEnt1.
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4

Untargeted Metabolomics of OCT1 Substrates

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To identify endogenous substrates of mouse and human OCT1, we performed untargeted metabolomics. Plated HEK293 cells overexpressing mOCT1, hOCT1 or the empty vector were incubated with pooled fresh frozen plasma. After lysis and protein quantification for normalization purposes, lipids and proteins were removed by a modified Bligh and Dyer method (Bligh and Dyer, 1959 (link)). The detailed protocol of sample workup is provided in the Supporting Information section online. Detection of metabolites was performed by mass spectrometry on a Xevo G2-S QToF. Analysis was performed using MassLynx 4.1 (Waters, Milford, United States), Progenesis QI 2.4 (Nonlinear Dynamics, Newcastle upon Tyne, United Kingdom) as well as Metaboanalyst 4.0 (Chong et al., 2019 (link)). Identification of metabolites was achieved by an in-house database as well as the HMDB database via Progenesis software (Wishart et al., 2007 (link)).
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5

Mass Spectrometry of Intact Proteins

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Mass spectra of intact proteins were obtained using a Xevo G2-S QTOF on a Waters ACQUITY UPLC Protein BEH C4 reverse-phase column (300 Å, 1.7 μm, 2.1 mm x 150 mm). An acetonitrile gradient from 5%−95% was used with 0.1% formic acid, over a run time of 5 min and constant flow rate of 0.5 mL/min at room temperature. Spectra were acquired from m/z 350 to 2000, at a rate of 1 sec/scan. Each analysis was 25 min under constant flow rate of 0.2 mL/min at room temperature. Data were acquired from m/z 350 to 2500, at a rate of 1 sec/scan. The spectra were deconvoluted using maximum entropy in MassLynx. All data are reported within 30 ppm.
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