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18 protocols using pierce ecl system

1

Hepatic Protein Analysis for HIF Factors

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Dissected livers were snap-frozen in liquid nitrogen and protein lysates for the detection of HIF1α and HIF2α proteins were extracted with the NE-PER kit (Pierce). Primary hepatocytes and Hep3B cells were lysed in buffer of 50 mM Тris–HCl, pH 8, 150 mM NaCl, 0.5% NP-40, 1 mM PMSF and a complete protease inhibitor cocktail tablet (Roche), kept on ice for 20 min and centrifuged at 12000 g for 20 min at 4 °C. 100 μg of proteins from liver or cells were resolved by SDS-PAGE, blotted, and probed with the following primary antibodies: Fmo5, PPARα, caspase-3, NF-kB p65, IL-6, IL-4, TNF-a, and GAPDH. The secondary antibody, either anti-mouse or anti-rabbit, was conjugated to horseradish peroxidase (1:5000; Bio-Rad Laboratories). The Pierce ECL system (ThermoScientific) was used for detection.
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2

Western Blot Analysis of X Protein

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Anti-98 rabbit polyclonal antibody was generated by GenScript against the peptide amino-TPRDRSAWRSSGSC-carboxy, representing X sequences from aa 98–111. Total protein was extracted from the 293 cells in the CelLytic M mammalian Cell Lysis/Extraction reagent (SIGMA). Protein concentration was determined using the protein assay dye reagent (Bio-RAD) and were normalized for equal loading. After separating on 10% SDS-PAGE gels, protein was transferred to Immun-Blot PVDF membranes. The membranes were then blocked for 1 hour at room temperature with 5% nonfat milk in 1× TBST buffer (10 mM Tris-Cl (pH 7.5), 150 mM NaCl, 0.1% Tween 20). Followed a brief rinse, membranes were incubated with polyclonal anti-98-X-horseradish-peroxidase (HRP)-conjugated antibody (1∶500 dilution, Sigma-Aldrich) at 4°C overnight. Washes in 1× TBST buffer were performed between incubations for three times. Blots were developed with Pierce ECL system (Thermo-Fisher Scientific). Probe detection of β-actin was carried out as control.
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3

Western Blot Analysis of BACE1, APP, and HIF1α

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Protease phosphatase inhibitor cocktail (04693132001, Roche) was added to the sample homogenate aliquot. 50 µg of protein from cerebral cortex or hippocampus were resolved by SDS-PAGE gel, blotted and probed by anti-BACE1 (1:500, #PA1-757, Invitrogen) or anti-β-actin (1:5000, NB600-501, Novus Biologicals). 20 µg of protein were resolved by SDS-PAGE gel, blotted and probed by anti-C-terminal APP (1:4000, A8717, Sigma). Protein lysates for HIF1α detection were extracted with the NER-PER-kit (Pierce) according to the manufacturer’s instructions. 20 µg nuclear extracts were resolved by SDS-PAGE gel, blotted and probed by anti-HIF1α (1:500, NB100-479, Novus Biologicals). HRP-conjugated secondary anti-rabbit or anti-mouse antibodies (1:5000, DAKO, Bio-Rad to detect anti-HIF1α) were used to detect the primary antibody. The Pierce ECL system (ThermoScientific) was used for detection. Results were semi-quantified using Fiji (ImageJ) software.
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4

Protein Quantification via Chemiluminescence

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This was performed using whole cell extracts, as described previously (Wang et al., 2010 (link)). The protein bands were visualized using a chemiluminescence Pierce® ECL system (Thermo Scientific), and the optical density of each band was quantitated using an ImageQuant 5.0 (Molecular Dynamics).
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5

Western Blot Analysis of Cellular Proteins

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Whole-cell lysates from approximately 2 × 105 cells per each sample were separated on 15% SDS-PAGE gels and transferred to a nitrocellulose membrane. Immunoblots were all blocked with 5% nonfat dry milk in Tris-buffered saline, 0.1% (TBS-T) prior to incubation with primary antibodies. The Anti-poly (ADP-ribose) polymer (1:1000 Abcam, ab14459) was stained overnight at 4 °C. For PARP1 and DNMT1 protein analyses, equivalent amount of whole-cell lysates were separated on 7% SDS-PAGE gels and transferred to a nitrocellulose membrane. Immunoblots were stained overnight with the following primary antibodies: Anti-PARP1 (1:1000 Active motif, Carlsbad, CA, USA; 39559), Anti-DNMT1 (1:1000, Abcam, Cambdrige, UK; ab19905). All secondary horseradish peroxidase (HRP)-conjugated antibodies were diluted 1:5000 and incubated for 1 h at room temperature with TBST/5% milk. Immuno-reactive proteins were detected using the Pierce® ECL system (Thermo Scientific, Whaltman, MA, USA; #32106).
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6

Protein Extraction and Western Blotting

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Cells were incubated at 30°C for 16 h in the presence (1 μg/mL) or absence of FLC. Cells were washed with sterile water once and then were subjected to cell lysis using the Bead Ruptor12 system (OMNI International, USA) in lysis buffer (PBS [pH 7.2 to 7.6]) containing 5 mM EDTA (pH 8.0), 1 mM phenylmethylsulfonyl fluoride (PMSF), and 1.0% protease inhibitor cocktail (Sigma). Proteins were separated by 4 to 20% SDS-PAGE and transferred to a polyvinylidene difluoride (PVDF) membrane. After blocking, anti-GFP antibody (Santa Cruz) or antitubulin antibody (Abbkine) was used for probing GFP-tagged proteins or tubulin, which were then detected using the secondary antibody goat anti-mouse IgG conjugated with horseradish peroxidase (HRP) (Santa Cruz) and the Pierce ECL system (Thermo Fisher Scientific, MA, USA).
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7

Western Blotting for Protein Analysis

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Protein extraction was performed using RIPA lysis buffer (Beyotime Biotechnology), and protein concentrations were determined using a BCA Protein Kit Assay Kit (Thermo Fisher Scientific, Inc.). The extracted proteins (15 μg/lane) were separated by 10% SDS-PAGE and transferred onto PVDF membranes. After blocking with 5% nonfat milk for 1 h at room temperature, the membranes were incubated overnight at 4°C with primary antibodies (Supplemental Table 2). The membranes were then incubated with goat anti-rabbit IgG H&L (horseradish peroxidase [HRP] conjugated) or goat anti-mouse IgG H&L (HRP conjugated) (both from Abcam) at a 1:10 000 dilution for 1 h at room temperature. To normalize for loading, β-Actin was used as a loading control. Finally, protein bands were detected using the Pierce ECL System (Thermo Fisher Scientific, Inc.) and analyzed with ImageJ software (National Institutes of Health).
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8

Quantification of HIF1α and HIF2α Proteins

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Dissected livers were snap-frozen in liquid nitrogen and protein lysates for the detection of HIF1α and HIF2α proteins were extracted with the NE-PER kit (Pierce). Primary hepatocytes and Hep3B cells were lysed in buffer of 50 mM Тris–HCl, pH 8, 150 mM NaCl, 0.5% NP-40, 1 mM PMSF and a complete protease inhibitor cocktail tablet (Roche), kept on ice for 20 min and centrifuged at 12 000 g for 20 min at 4 °C. 100 μg of proteins from liver or cells were resolved by SDS-PAGE, blotted, and probed with the following primary antibodies: HIF1α (NB-100479, Novus Biologicals), HIF2α (NB100-122, Novus Biologicals) and β-actin (NB600-501, clone AC-15, Novus Biologicals). The secondary antibody, either anti-mouse or anti-rabbit, was conjugated to horseradish peroxidase (1:5000; Bio-Rad Laboratories). The Pierce ECL system (ThermoScientific) was used for detection.
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9

Western Blot Protein Expression Analysis

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Total proteins were extracted from the tissues by homogenization in RIPA buffer containing protease inhibitors. The homogenate was cleared by centrifugation at 4 °C for 30 min at 12 000 rpm, and the supernatant (containing the protein fraction) was collected. Protein concentration in the supernatant was measured using the BCA Protein Assay Kit (Beyotime). A total of 20 mg protein per sample was resolved in a 10–12% SDS‐PAGE gel and transferred to a nitrocellulose membrane. The membranes were blocked with 5% w/v BSA in tris‐buffered saline containing 0.2% Tween‐20, and then incubated at 4 °C overnight with primary antibody. The membranes were then washed and probed with the appropriate horseradish peroxidase‒conjugated secondary antibody and detected using the Pierce ECL System (Thermo Scientific). See Table S2, Supporting Information, for the antibodies used.
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10

Chemerin Protein Expression Analysis

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Frozen renal tissue was homogenized, protein samples were prepared as described [57 (link)] and separated on a denaturing SDS-PAGE gel [58 (link)]. After electrophoresis, the gels were electroblotted onto PVDF membranes (Hybond-P, GE Amersham, Munich, Germany), blocked with Rotiblock (Roth, Karlsruhe, Germany) for 1 h and incubated overnight with a primary antibody to chemerin. Protein bands were visualized with secondary horseradish peroxidase-conjugated IgG antibodies (Santa Cruz Biotechnology, 1:50,000), using the Pierce ECL+ system (Thermo Fisher Scientific, Waltham, MA, USA). Blots were quantified using a luminescent imager (LAS-1000, Fujifilm, Berlin, Germany) and Aida 2.1 image analysis software (Raytest, Berlin, Germany). Loading of the blot was quantified by Amido Black staining solution (Sigma, Taufkirchen, Germany).
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