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7 protocols using cd20 percp

1

Single-cell expansion and antigen-specific T-cell analysis

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Up to 4 biopsies per patient were pooled and digested in 1 mL of Hanks’ balanced salt solution Ca2+Mg2+ (Gibco) supplemented with 0.5% (v/v) human AB-serum, 100 IU ml−1 of penicillin, 100 µg ml−1 of streptomycin, 0.25 µg ml−1 of amphotericin B, 10 IU ml−1 of DNase I (CellSystems) and 1 mg ml−1 of collagenase type CLS IV (Biochrom) for 30 min at 37 °C while shaking. Cells were filtered through a 40-µm cell strainer to remove aggregates and stained with fluorochrome-conjugated antibodies to CD4-VioBlue, CD3-PE, CD8-PerCP, CD14-PerCP, CD20-PerCP, CD45RO-APC and CCR7-PE-Vio770 (all Miltenyi Biotec). Each 200 CD3+CD4+CD45RO+ cells were sorted in multiple wells of a 96-well plate containing irradiated allogeneic feeder cells in TexMACS medium, supplemented with 5% (v/v) human AB-serum, 200 U ml−1 of IL-2 and 100 IU ml−1 of penicillin, 100 µg ml−1 of streptomycin, 0.25 µg ml−1 of amphotericin B at a density of 2 × 105 cells cm−2. Cells were polyclonally expanded for 4 weeks in the presence of 30 ng ml−1 of anti-CD3 (OKT-3; Miltenyi Biotec). Restimulation with different fungal lysates was performed as described above. To calculate the frequencies of reactive T cells, the mean values were calculated for each antigen and divided by the number of input wells.
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2

Multiparametric Flow Cytometry Analysis

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The following mAbs were used for staining and flow cytometric measurements: CD3-VioGreen (BW264/56), CD4-allophycocyanin-Vio770 (VIT4), CD8-PE-Vio770 (BW135/80), CD14-peridinin chlorophyll protein (PerCP) (TÜK4), CD20-PerCP (LT20), CD27-FITC (M-T271), CD28-FITC (15E8), CD45RA-VioBlue (T6D11), CD45RO-FITC (UCHL1), CD62L-FITC (145/15), CD107a-PE (1D4B), CD127-FITC (MB15-18C9), CD137-allophycocyanin, CD137-PE (4B4-1), CD154-VioBlue (5C8), CD178-PE (NOK-1), CD197 (CCR7)-allophycocyanin, CD197 (CCR7)-PE (150503), CD279-allophycocyanin (PD1.3.1.3), anti-IL-2-PE-Vio770 (N7.48A), anti-IL-4-PE (7A3-3), anti-IL-17-FITC (CZ8-23G1), anti-IFN-γ-FITC, anti-IFN-γ-PE-Vio770 (45-15), anti-TNF-α-PE, and anti-TNF-α-VioBlue (cA2) (all Miltenyi Biotec).
Soluble biotinylated pHLA-A*0201 molecules loaded with WT137 (VLDFAPPGA), WT1126 (RMFPNAPYL), WT1187 (SLGEQQYSV), WT1235 (CMTWNQMNL), or cytomegalovirus (CMV) pp65495 (NLVPMVATV) were produced as described previously.14 (link) Tetramerization was achieved by binding to streptavidin-PE or streptavidin-allophycocyanin (both BioLegend, San Diego, CA). In each case, 2·5 × 106 cells were stained with 1 µg/ml tetramer for 45 min at 4°C.
Data were acquired using a MACSQuant flow cytometer and analysed with MACSQuantify software (both Miltenyi Biotec).
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3

Xenograft Tumor Injection and PBMC Isolation

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K562-luc2 cells were thawed from cryopreservation 48h before tumor injections and maintained at 37°C, 5% CO2 in Iscove’s DMEM supplemented with 10% FBS and 8µg/mL blasticidin for 2 days. On the day of tumor injections, K562-luc2 cells were removed from culture, washed three times with sterile PBS, and resuspended at a concentration of 1x106 cells/200µL in sterile saline. Cryopreserved PBMCs were thawed in a 37°C water bath for two minutes or until a small ball of ice remained in solution. PBMCs were resuspended in 5mL RPMI + 10% FBS. A small aliquot (50 µL) was taken, and cells were labeled with monoclonal antibodies (CD8-VioBlue, CD14-VioGreen, CD3-FITC, CD4-PE, CD20-PerCP, CD45-APC, CD56-APC-Vio770 (Miltenyi Biotec) for surface staining prior to injection. The remaining cells were supplemented with IL-15 (0.1mg/mL) and incubated for 1 hour at 37°C, 5% CO2 to improve activation and recovery of NK cells functions. After incubation, PBMCs were washed three times with PBS to remove all RPMI media and then resuspended at a concentration of 10x106 PBMCs/200µL sterile filtered saline for injections.
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4

Tracking Human Immune Cell Engraftment

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Human immune cell engraftment was tracked weekly. A sample of blood (50-100µL) was collected from each mouse using the submental method. 25µL of whole blood samples were stained and analyzed by flow cytometry using the following directly conjugated antibodies: CD8-VioBlue, CD14-VioGreen, CD3-FITC, CD4-PE, CD20-PerCP, CD45mouse-PE-Vio770, CD45human-APC, CD56-APC-Vio770 (Miltenyi Biotec). All antibodies, except CD45mouse, were reactive with human antigens. CD45mouse was used to exclude mouse leukocytes from the analysis.
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5

Detailed Lymphocyte Characterization and nAb Quantification

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Heparinized blood was utilized for a 24 h whole blood peptide stimulation assay and for isolation of peripheral blood mononuclear cells using standard density gradient centrifugation protocols. Ethylenediaminetetra-acetic acid whole blood samples were stained and analyzed via flow cytometry (MACSQuant 10, Miltenyi Biotec, Bergisch Gladbach, Germany) to determine lymphocyte counts and immune cell subsets using the following conjugated antibodies: CD8-VioBlue, CD14-VioGreen, CD3-VioGreen, CD3-FITC, CD4-FITC, CD4-PE, CD62L-PE, CD20-PerCP, PD-1-PerCP, CD45RA-PerCPVio770, CD45-APC, and CD56-APCVio770 (Miltenyi Biotec, Bergisch Gladbach, Germany). The percentage of all CD45+ lymphocytes expressing the surface marker of interest were multiplied by the total lymphocyte count to enumerate each lymphocyte subset per unit of whole blood. Serum was isolated from each timepoint and frozen for future analysis to determine SARS-CoV-2 nAb titers using commercially available enzyme-linked immunosorbent assay (ELISA) kits (Cayman Chemical, Ann Arbor, MI, USA).
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6

Expansion and Characterization of Antigen-Specific T Cells

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Up to 4 biopsies per patient were pooled and digested in 1 mL of Hanks’ balanced salt solution Ca2+Mg2+ (Gibco) supplemented with 0.5% (v/v) human AB-serum, 100 IU ml−1 of penicillin, 100 μg ml−1 of streptomycin, 0.25 μg ml−1 of amphotericin B, 10 IU ml−1 of DNase I (CellSystems) and 1 mg ml−1 of collagenase type CLS IV (Biochrom) for 30 min at 37 °C while shaking. Cells were filtered through a 40-μm cell strainer to remove aggregates and stained with fluorochrome-conjugated antibodies to CD4-VioBlue, CD3-PE, CD8-PerCP, CD14-PerCP, CD20-PerCP, CD45RO-APC and CCR7-PE-Vio770 (all Miltenyi Biotec). Each 200 CD3+CD4+CD45RO+ cells were sorted in multiple wells of a 96-well plate containing irradiated allogeneic feeder cells in TexMACS medium, supplemented with 5% (v/v) human AB-serum, 200 U ml−1 of IL-2 and 100 IU ml−1 of penicillin, 100 μg ml−1 of streptomycin, 0.25 μg ml−1 of amphotericin B at a density of 2 × 105 cells cm−2. Cells were polyclonally expanded for 4 weeks in the presence of 30 ng ml−1 of anti-CD3 (OKT-3; Miltenyi Biotec). Restimulation with different fungal lysates was performed as described above. To calculate the frequencies of reactive T cells, the mean values were calculated for each antigen and divided by the number of input wells.
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7

Multi-Parameter Flow Cytometry for Immune Cell Enumeration

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Whole blood samples were labeled with directly conjugated antibodies for multi-parameter flow cytometry to enumerate CD45+CD14+ monocytes and CD45+CD14- lymphocytes subsets, as previously described (20 (link)). Briefly, 100µL of EDTA whole blood was incubated with the following antibodies CD8-VioBlue, CD14-VioGreen, CD3-FITC, CD4-PE, CD62L-PE, CD20-PerCP, CD45RA-PerCPVio770, CD45-APC, and CD56-APC-Vio770 (Miltenyi Biotec Inc., Gernany) for 30 min at room temperature and then lysed (RBC lysis buffer; eBioscience, San Diego, CA) for 20 min at room temperature followed by three wash cycles. For lymphocyte and monocyte enumeration, whole blood samples were labeled with CD14 and CD45 only, underwent a lyse-no-wash procedure and adjusted for the dilution factor. The total cell numbers of each lymphocyte subset were determined by multi-parameter flow cytometry (MACSQuant 10; Miltenyi Biotec Inc. Bergisch Gladbach, Germany) by multiplying the percentage of all lymphocytes expressing the surface markers of interest by the total lymphocyte count.
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