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8 protocols using trehalose

1

Trehalose and Soluble Starch Protocol

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Trehalose was purchased from FUJIFILM Wako Pure Chemicals Co.
(Osaka, Japan). Soluble starch was purchased from Kanto Chemical Co.,
INC. (Tokyo, Japan). All other chemicals used here were of molecular
biology grade.
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2

Cryopreservation of Permeabilized Embryos

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The permeabilized embryos attached to nylon were exposed to a 2 M EG (Wako, Japan) solution in Grace’ medium in each of the exposure times (30, 60, 90, and 120 min). Next, the embryos were blotted on a sterilized filter paper to remove the excess EG solution and step-wisely transferred to Grace’s medium containing decreasing amounts of trehalose (0.5 M for 5 min; 0.25 M for 10 min; 0.125 M for 10 min; Wako, Japan) to remove the EG. Then, the embryos were blotted on a sterilized filter paper to remove the excess trehalose solution and washed in Grace’s medium two times for 5 min. All these steps were performed in an air-conditioned room (25 °C). Finally, the embryos were cultured in the dry–moist system.
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3

Immunohistochemical Analysis of PROP1 Expression

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Immunohistochemical staining for PROP1 was performed as described previously [7 (link)]. Briefly, the pituitary glands of
Wistar-Imamichi rats on E13.5, E14.5, postnatal day (P) 4, and P30 were fixed with 4% paraformaldehyde (Sigma-Aldrich, St. Louis, MO, USA), followed by
immersion in 30% trehalose (Wako, Osaka, Japan) in 20 mM HEPES for tissue cryoprotection. Cryosections of 6 µm thick were treated with guinea pig IgG against
rat PROP1 (2 ng/µl; produced in our laboratory), followed by Cy3-conjugated AffiniPure donkey anti-guinea pig IgG (1:500 dilution; Jackson ImmunoResearch, West
Grove, PA, USA). The sections were enclosed in VECTASHIELD mounting medium with 4′,6-diamidino-2-phenylindole (DAPI; Vector Laboratories, Burlingame, CA, USA).
Immunofluorescence was observed using fluorescence microscopy with a BZ-8000 microscope (Keyence, Tokyo, Japan).
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4

Carbohydrate-Induced Protein Stabilization

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Sorbitol, sucrose, and trehalose were acquired from Wako Pure Chemicals (Tokyo, Japan). Guanidine hydrochloride (GdnHCl), 1-anilino-8-naphthalenesulfonate (ANS), p-nitrophenyl-α-D-glucopyranoside (pNPG), and p-nitrophenol (pNP) were obtained from Sigma-Aldrich Chemicals (St. Louis, MO, USA). All other chemicals used were of analytical grade or the equivalent.
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5

Drosophila Rearing Conditions Protocol

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Drosophila melanogaster flies were reared on standard agar-cornmeal media at 25 °C unless otherwise indicated8 (link), 50 (link). The detailed food compositions, except preservatives, are shown in Fig. 4B. Casein, peptone, and trehalose were obtained from Wako Chemical, BD Biosciences, and Hayashibara, Co., respectively. All experiments were conducted under non-crowded conditions. No yeast paste was added to the fly tubes for any of the experiments. The percentage of puparium formation and adult flies was determined by counting homozygotes and heterozygotes in the same vials as an internal control.
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6

In Situ Hybridization Analysis of Mouse Embryos

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In situ hybridization was performed according to a previous report (Fujiwara et al., 2007 (link)). Briefly, each digoxigenin (DIG)-labeled cRNA probe was amplified by PCR using primer sets (Table 2) and labeled using the Roche DIG RNA labeling kit (Merck, Schwalbach, Germany). Embryos at E10.5 and the heads of mice at E14.5 were fixed using MEMFA (2 mM EGTA, 1 mM MgSO4, and 3.7% formaldehyde) in 100 mM MOPS (pH 7.5) overnight at 4°C, and this was followed by immersion in 30% trehalose (Wako) in 20 mM HEPES to cryoprotect the tissues. Cryosections (7 μm thickness) from the transverse or sagittal plane were hybridized with DIG-labeled cRNA probe and were visualized with alkaline phosphatase-conjugated anti-DIG antibody (Merck) using 4-nitroblue tetrazolium chloride (NBT; Merck) and 5-bromo-4-chloro-3-indolyl phosphate (BCIP; Merck). The sections were observed under a BZ-X800 microscope (KEYENCE, Osaka, Japan).
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7

Trehalose Effects on Hepatocyte Viability

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Hepatocytes were suspended at a density of 1 × 106 viable cells/mL in DHDM supplemented with various concentrations of trehalose (0, 26 μM, 26 mM, 260 mM, 520 mM, 1 M; Wako, Osaka, Japan). Cells were incubated for 60 min at 4 °C, and the suspension was placed on a hemocytometer and photographed to allow measurement of the projection area using ImageJ software (National Institutes of Health, Bethesda, MD, USA), as described previously [23 ]. The sphere-equivalent volume of cells was calculated from the projection area. To determine cellular activity, hepatocytes exposed to trehalose were resuspended in DHDM and seeded in collagen I-C-coated 96-well plates at a density of 2.5 × 104 cells/cm2 and incubated at 37 °C under 5% CO2, with the medium replaced once at 4-h post-inoculation. Intracellular dehydrogenase activity was evaluated at 24-h post-inoculation using the Cell Counting Kit-8 (CCK-8; Dojindo, Kumamoto, Japan).
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8

Monitoring Cytochrome c Autoxidation Kinetics

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The ferrous Cyt c autoxidation kinetics were studied using a Hitachi U-3310 UV-visible spectrophotometer (Tokyo, Japan) at 293 K in a 50 mM sodium phosphate buffer (pH 7.0).
Ferrous Cyt c was prepared by reducing ferric Cyt c with sodium dithionite, and excess reductant was removed using a PD MiniTrap G-25 column (GE Healthcare). The concentration of PEG 4000 or trehalose (Wako Pure Chemical Industries, Osaka, Japan) was varied between 0 and 20%. Oxidation of Cyt c was monitored by measuring the absorbance at 550 nm after adding ferrous Cyt c to the reaction solution at a final concentration of 3 M.
The absorption at 550 nm was recorded in intervals of 0.5 s over 5 min. The end point of Cyt c autoxidation was determined by adding a small amount of potassium ferricyanide to the reaction solution.
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