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11 protocols using azd6244

1

Apoptosis Signaling Pathway Protocol

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Selumetinib (also known as AZD6244 and ARRY-142886) and AZD8055 were provided by AstraZeneca (Macclesfield, UK). ABT-737 was synthesized at the University of Texas MD Anderson Cancer Center based on its published chemical structure (15 (link)). The chemical structures of the above-mentioned reagents are shown at Supplementary Figure S1. Antibodies against human phosphorylated (p)-p44/42 MAPK (ERK1/2)(Thr202/Tyr204), p-AKT(Ser473), p-AKT(Thr308), p-S6K(Ser240/244), p-Rb (Ser780), p-4E-BP1 (Thr37/46), p-Bad (Ser136), p-MEK1/2 were purchased from Cell Signaling Technology (Danvers, MA), as were the antibodies against AKT, S6K, 4E-BP1, Bad, Bid, Bcl-xL, survivin, caspase-8, caspase-9, and cleaved-caspase-3. Antibodies against Bax, Mcl-1, XIAP, and p27Kip-1 were purchased from BD Biosciences (San Jose, CA), antibody against Bcl-2 was purchased from Dako (Carpinteria, CA), antibody against Bak was purchased from Upstate (Lake Placid, NY), antibodies against ERK2, Cdk2, and Cdk4 were purchased from Santa Cruz Biotechnology (Santa Cruz, CA), and antibodies against Bim, cyclin D1, Cdc2, and Puma were purchased from CalBiochem (San Diego, CA).
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2

Evaluating AZD6244 and Bleomycin Combination

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AZD6244 (selumetinib) was purchased as a research agent from the Selleckchem Chemicals LLC (Houston, TX, USA). AZD6244 (selumetinib), originally developed by AstraZeneca, is a highly potent and selective non-ATP competitive inhibitor of MEK with an IC50 of 14 nM [45 (link)]. Bleomycin Sulfate, Streptomyces verticillus, was purchased from Sigma (St. Luis, MO).
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3

Cytotoxicity Assay for MPNST Cells

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Cytotoxicity of the tested compounds was measured as described previously [26 (link)]. In brief, MPNST cells were seeded in 96-well-plates at 5000 cells per well and treated with the ATP-competitive mTOR inhibitor AZD8055 (AstraZeneca, Cambridge, UK), the allosteric AKT inhibitor MK-2206 (Selleckchem, Munich, Germany), the allosteric MEK1 and MEK2 inhibitor AZD6244 (AstraZeneca, Cambridge, UK), the combination of MK-2206 and AZD8055, or the combination of all three compounds for 72 h. Cytotoxicity was measured by XTT (2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-5-[(phenylamino) carbonyl]-2H-tetrazolium hydroxide) assay (Roche, Penzberg, Germany) in quadruplicates.
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4

Inhibition of STAT3 and JAK Signaling

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AZD6244, AZD1480 and AZD9150 were obtained from AstraZeneca (Macclesfield, UK), Crizotinib from Pfizer (Peapack, New Jersey, USA), TG101348 from Axon Medchem (Groningen, The Netherlands), Trametinib, AZD8931, Vorinostat and Entinostat (MS-275) from Selleck Chemicals LLC (Suffolk, UK), Stattic from Sigma-Aldrich (Dorset, UK), UO126 from Promega (Southampton, UK) and PD98059 from Cell Signaling (Beverly, MA, USA). siRNAs targeting STAT3 (STAT3_7), JAK1 (JAK1_1), JAK2 (JAK2_7) and caspase 9 (CASP9_5) were purchased from Qiagen (Crawley, UK); the c-FLIP siRNA sequence used was 5′ AAG CAG TCT GTT CAA GGA GCA; the caspase 8 sequence used was 5′ GAG UCU GUG CCC AAA UCA ATT (17 (link)).
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5

Enhancing TRAIL-Induced Apoptosis Potency

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AZD6244, recombinant human (rh)TRAIL and z-VAD-FMK were purchased from AstraZeneca (Macclesfield, UK), Calbiochem (Hertfordshire, UK) and Sigma-Aldrich (Gillingham, Dorset, UK), respectively. Isoleucine-zipper TRAIL (iz-TRAIL) was expressed and purified in-house14 (link). iz-TRAIL is a modified form of rhTRAIL that comprises an isoleucine zipper motif fused to its N-terminus, which enhances its ability to trimerise — a process required for its apoptotic activity, consequently increasing its potency. siRNA sequences targeting RALA (_8 SI03101133), RALB (_1 S100045199; _4 SI00045178; _6 SI03054793; _7 SI03117492), RALGDS (_5 SI03231424), Caspase-8 (_11 SI02661946) and Caspase-9 (_5 SI00299600) were purchased from Qiagen (Crawley, UK). siRNA sequences targeting DR4 and DR5 were purchased from Dharmacon. TRAIL neutralising antibody, Chloroquine and Bafilomycin A1 were purchased from R&D systems (Abingdon, UK), Invivogen (San Diego, CA) and Merck Millipore (Darmstadt, Germany), respectively.
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6

Targeting of ER Stress in Cancer

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Carfilzomib, ACY-1215 and trametinib were purchased from SelleckChem (Suffolk, UK), AZD6244 (13 (link)) from AstraZeneca (Macclesfield, UK) and Z-VAD-FMK (14 (link)) from Calbiochem (Hertfordshire, UK). HA15 was generated in house (15 (link)). HA15 was synthesised from commercial N-(4-(3-aminophenyl)thiazol-2-yl)acetamide and commercial dansyl chloride, according to the literature (WO2014/072486). siRNAs targeting Caspase-8, Caspase-9, HSPA5 and CHOP were purchased from Qiagen (Crawley, UK) and Invitrogen respectively. The ON-Targetplus siRNA library was obtained from Dharmacon (Lafayette, USA). The BRAFV600E plasmid was a gift from Prof. Marais (London, UK)(16 (link)).
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7

Cell Viability Assay with AZD6244

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Cell viability was determined by using CCK8 (Dojindo, Kumamoto, Japan) according to the instruction of manufacture. Cells were seeded in 96-well plates for 24 hours. Then cells were treated with serials concentration (0, 1, 2, 3 and 4 μM) of AZD6244 (AstraZeneca, London, UK) for 24 or 48 hours. A 10 μL of CCK8 solution was then added to each well, and the plates were incubated at 37°C for 2 hours. The optical density (OD) of each well was measured at 450 nm.
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8

Cell Line Establishment and Manipulation

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The human lung adenocarcinoma cell lines A549, PC9 (EGFR mutant) and the human colon cancer cell lines SW480 and SKCO1 (KRAS mutant) were obtained from the China Center for Type Culture Collection (Wuhan, China). A Cisplatin-resistant subline of A549 and a gefitinib-resistant subline of PC9 were established by repeated subculturing with gradual increasing in the Cisplatin (2, 4, 6, 8 and 10 μM) or gefitinib concentration (4, 8, 16, 20 and 40 μM) over a 3-month period.52 (link) In addition, A549, PC9, SW480 and SKCO1 cell lines with stable overexpression or knockdown of ZNF32 were constructed as described previously.35 (link)BALB/c male nude mice, 6 weeks of age, were maintained under standard conditions in the animal facility of Sichuan University. All experiments in this study were performed in accordance with the nation's relevant laws and animal welfare requirements.
Cisplatin and 5-FU were purchased from Sigma-Aldrich (St Louis, MO, USA), and gefitinib and AZD6244 were obtained from AstraZeneca (Cheshire, UK) and dissolved in DMSO to obtain a stock solution of 10 mM. These drugs were diluted with culture medium for use in the experiments. Recombinant human TGF-β1 (TGF-β) was purchased from R&D Systems and used at a concentration of 10 ng/ml. LY2157299 (Selleck), an inhibitor of TGF-β signaling, was used at a concentration of 1 μM in the experiments.
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9

Investigating EGFR and MET Inhibitors

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AZD9291 and AZD6244 were provided by AstraZeneca Pharmaceuticals. Erlotinib, gefitinib, afatinib, CO1686, crizotinib, capmatinib, cabozantinib, MGCD-265, and merestinib were purchased from Selleckchem. All drugs were dissolved in dimethyl sulfoxide (DMSO) at a 10 mM concentration and stored in small aliquots at -20°C until further use. Antibodies specific for p-EGFR (Tyr1068), EGFR, p-AkT (Ser473), AkT, p-ERK1/2 (Thr202/Tyr204), ERK1/2, p-MET (Tyr1234/1235), MET, and Ki-67 were obtained from Cell Signaling Technologies. HRAS, Maspin, and β-actin antibodies were obtained from Santa Cruz Biotechnology. HRAS siRNA, Maspin siRNA and control siRNA were purchased from Santa Cruz Biotechnology.
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10

Doxycycline-EGF-Verteporfin Combination Protocol

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Doxycycline (2µg/mL), hEGF (5ng/mL) and verteporfin were from Sigma. AZD6244 was from AstraZeneca. FRAX597 was from Selleckchem.
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