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13 protocols using ccd camera

1

Electron Microscopy of Mouse Lungs

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Mouse lungs were inflation-fixed with 2% paraformaldehyde [Electron Microscopy Sciences (EMS)], 2% glutaraldehyde (EMS), 0.1% calcium chloride (Fisher Scientific) in 0.1 M sodium cacodylate (EMS) buffer (SCB), pH 7.2, under 25 cm pressure, followed by immersion fixation with fresh fixative at 4 °C overnight. Lung lobes were cut into 1–2 mm blocks and processed for transmission electron microscopy as previously described52 (link). 90 nm mouse lung sections were viewed, and images were digitally acquired by a Hitachi H-7650 transmission electron microscope (Hitachi High Technologies USA) equipped with a CCD camera (Advanced Microscopy Techniques) at 80 kV.
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2

Visualizing Virus-Like Particles by Electron Microscopy

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The construction of VLPs was conducted as described in the previous study [11 (link)]. VLPs were based on a recombinant Baculovirus (rBV) expressing system using the HPAI H5N1 virus (A/chicken/Egypt/121/2012) [15 ]. In this study, we additionally explore the morphology and the size of the generated VLPs using Electron microscopy. VLP samples were adsorbed onto freshly discharged 400 mesh carbon parlodion-coated copper grids (Poly-Sciences, Warrington, PA USA). The grids were rinsed with buffer containing 20 mM Tris, pH 7.4, and 120 mM KCl and negatively stained with 1% phosphotungstic acid, then dried by aspiration. VLPs were visualized on a Hitachi H-7600 transmission electron microscope (Hitachi High Technologies America, Schaumburg, IL USA) operating at 80 kV and digitally captured with a CCD camera at 1 kx1 k resolution (Advanced Microscopy Techniques Corp., Danvers, MA, USA) [10 (link)].
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3

Negative Staining of Hybrid Nanoparticles

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HNPs (1 mg/ml) in a volume of 5 µL were placed on a grid (Nisshin EM, Tokyo, Japan) and dried with a stream of warm air 3 times. Then, each sample was negatively stained with 10 µL of 1 w/v% ammonium molybdate for 1 min and imaged with an HT7700 TEM System (Hitachi High-Technologies, Tokyo, Japan). The images were recorded with a CCD camera at 1024 × 1024 pixels (Advanced Microscopy Techniques, Woburn, MA, USA).
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4

Visualizing MERS-CoV and SARS-CoV S Proteins

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Purified MERS-CoV and SARS-CoV S proteins were adsorbed by flotation for 2 min onto a freshly discharged 400-mesh carbon parlodion-coated copper grid (Poly-Sciences, Warrington, PA). The grids were rinsed with buffer containing 20 mM Tris, pH 7.4, and 120 mM KCl and negatively stained with 1% phosphotungstic acid, then dried by aspiration. Virus-like particles were visualized on a Hitachi H-7600 transmission electron microscope (Hitachi High Technologies America, Schaumburg, IL) operating at 80 kV and digitally captured with a CCD camera at 1 K × 1 K resolution (Advanced Microscopy Techniques Corp., Danvers, MA).
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5

Visualizing MERS-CoV and SARS-CoV Spike Proteins

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Purified MERS-CoV and SARS-CoV S proteins were adsorbed by flotation for 2 minutes onto a freshly discharged 400-mesh carbon parlodion-coated copper grid (Poly-Sciences, Warrington, PA). The grids were rinsed with buffer containing 20mM Tris, pH 7.4, and 120mM KCl and negatively stained with 1% phosphotungstic acid, then dried by aspiration. Virus-like particles were visualized on a Hitachi H-7600 transmission electron microscope (Hitachi High Technologies America, Schaumburg, IL) operating at 80 kV and digitally captured with a CCD camera at 1K×1K resolution (Advanced Microscopy Techniques Corp., Danvers, MA).
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6

Visualizing Virus-Like Particles by TEM

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VLP samples were adsorbed onto a freshly discharged 400 mesh carbon parlodion-coated copper grids (Poly-Sciences, Warrington, PA). The grids were rinsed with buffer containing 20 mM Tris, pH 7.4, and 120 mM KCl and negatively stained with 1% phosphotungstic acid, then dried by aspiration. VLPs were visualized on a Hitachi H-7600 transmission electron microscope (Hitachi High Technologies America, Schaumburg, IL) operating at 80 kV and digitally captured with a CCD camera at 1k×1k resolution (Advanced Microscopy Techniques Corp., Danvers, MA).
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7

Lung Tissue Fixation and Transmission Electron Microscopy

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Lungs were gravity inflation–fixed with 2% paraformaldehyde, 2% glutaraldehyde, and 0.1% calcium chloride in 0.1 M sodium cacodylate buffer, pH 7.2, followed by immersion fixation with fresh fixative at 4°C overnight. Lung lobes were cut into 1–2 mm blocks and processed for transmission electron microscopy as previously described (66 (link)). Images were digitally acquired by an H-7650 transmission electron microscope (Hitachi High Technologies) equipped with a CCD camera (Advanced Microscopy Techniques) at 80 kV.
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8

Transmission Electron Microscopy of Cells

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Since STXN accumulates in the cell wall, cells were evaluated by TEM to exclude pigment leakage as a cause for loss of pigment. Briefly, cells were fixed, embedded in agarose and blocks were post-fixed with 1% osmium tetroxide/1.5% potassium ferrocyanide then stained with uranyl acetate. Specimens were serially dehydrated in ethanol, and embedded in Spurr resin (Electron Microscopy Sciences, PA). Ultrathin sections (~70nm) mounted on copper grids were examined in a Tecnai T12 TEM (Thermo Fisher Scientific, Hillsboro, OR). Digital images were taken using a CCD camera (Advanced Microscopy Techniques, Corp, Woburn, MA) and AMT600 software.
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9

Transmission Electron Microscopy of Cells

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Cells were grown in six-well tissue culture dishes to 80% confluency and subsequently fixed with 2.5% glutaraldehyde. Samples were prepared as previously described,72 (link) and then photographed using a JEM 1210 transmission electron microscope (JEOL, Peabody, MA, USA) equipped with a CCD camera (Advanced Microscopy Techniques Corp., Danvers, MA, USA) at 80 kV.
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10

Ultrastructural Analysis of Candida albicans

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C albicans cells were processed for ultrastructure studies, with modifications in previously described protocol [28 (link)]. After 24h of respective treatments in YPD broth, C albicans cells were initially fixed for overnight with 500 µl of 3% glutaraldehyde/0.1 M phosphate buffer followed by fixation with same fixative with 0.15% tannic acid for 1h. After three rinses in 0.1 M phosphate buffer, the specimens were subjected to secondary fixation with 1% osmium tetroxide/0.1 M phosphate buffer for 1h. Samples were then rinsed for five times with distilled water followed by Enbloc staining with 1% uranyl acetate in distilled water for 1h. Samples were thoroughly rinsed in distilled water and then dehydrated through a range of 70–100% ethanol. After dehydration, samples were infiltrated with acetone and embedding resin (50:50) for 48 h. Specimens were then embedded with 100% resin (Embed 812, Electron Microscopy Sciences, Hatfield, PA) and polymerized overnight. Sections were cut, 80–85 nm and placed on copper mesh grids and viewed on Transmission Electron Microscope (TEM) (ThermoFisher, Tecnai Spirit, Hillsoboro, OR) and images were captured with CCD camera (Advanced Microscopy Techniques Danvers, MA). Analysis of cell wall thickness was done with TEM images using ImageJ software (n = 20 cells).
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