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8 protocols using sw480

1

Colon Cancer Cell Line Cultivation

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The colon cancer cell lines HCT116 and SW480 were obtained from the European Collection of Cell Cultures (Salisbury, UK). The colon cancer cell line RKO was from the American Type Culture Collection. Cells were cultured in a humidified incubator (37 °C, 5% CO2) with normal cell culture growth medium containing 10% FCS, as described in detail before [33 (link)].
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2

CRC Cell Lines Growth Protocol

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The human CRC cell lines (HCT116, SW480) used in this study, were from the European Collection of Cell Cultures (Salisbury, UK). The RKO cell line was from the American Type Culture Collection (ATCC). A whole cell culture growth medium, supplemented with 10% FCS, was prepared and cells cultured as previously described in detail [30 (link)].
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3

Culturing Human Colorectal Cancer Cell Lines

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Established human CRC cell lines (HCT116, LS180, COLO205, HT29 and SW480) were purchased from European Collection of Cell Cultures (ECACC, Salisbury, UK). HCT116, LS180 and COLO205 were maintained in RPMI-1640 supplemented with 10% FBS, GlutaMAX-I, non-essential amino acids (NEAA), 100 mM sodium pyruvate, 10 mM HEPES (all from GIBCO) and 50 mM 2-mercaptoethanol (Sigma–Aldrich, St. Louis, MO). HT29 was maintained in McCoy’s 5A medium (Sigma) supplemented with 10% FBS and GlutaMAX-I. SW480 were cultured in L-15 Medium (Leibovitz) (Sigma–Aldrich) supplemented with 10% FBS and GlutaMAX-I. Kanamycin sulfate (GIBCO) was included with all media. Absence of mycoplasma contamination in cultured cells was verified by PCR testing prior to investigation.
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4

Characterization of Human CRC Cell Lines

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The human CRC cell lines DLD1, RKO, SW480 and LS513 were purchased from the European Collection of Cell Cultures (Sigma-Aldrich, Munich, Germany) or the American Type Culture Collection (LGC Standards, Wesel, Germany), respectively. DLD1 cells homozygously harboring the hypomorphic Seckel mutation (ATRs/s) have been described previously [14 , 23 (link), 24 (link)]. This mutation causes a strongly reduced but not absent ATR protein expression without significant impairment of cell proliferation or survival [24 (link)]. All cell lines were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal calf serum and 1% penicillin-streptomycin (PAA, Coelbe, Germany) and incubated at 37°C and 5% CO2.
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5

Paired Colon Cancer Cell Lines for Research

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The paired colon cancer cell lines SW480 (ECACC: 87092801, colon adenocarcinoma) and SW620 (ECACC: 87051203, lymph node metastasis) were purchased from the European Collection of Cell Cultures (ECACC) and maintained in L-15 Medium with GlutaMAX™ supplemented with 10% [v/v] fetal calf serum (Lonza) and 100 U/ml Penicillin, 100 μg/ml Streptomycin and 12.5 μg/ml Amphotericin at 37 °C in a humidified incubator without the introduction of CO2.
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6

Overexpression of c-Src in Colon Cancer Cells

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COLO-205, SW48, SW480, LS180, LS174-T, HT-29, T84 and LoVo cells were purchased from the European Collection of Cell Cultures (ECACC). Cells in culture were maintained as a subconfluent monolayer in Dulbecco's Modified Eagle's medium supplied with non-essential amino acids (LS180 and LS174-T), Dulbecco's modified Eagle's medium-F12 nutrient mixture (T84), McCoy 5-A medium (HT-29), L15 Leivobitz medium (SW48 and SW480), Nutrient Mixture F12 HAM (LoVo) and RPMI 1640 (COLO-205) purchased from Sigma. Each cell line was grown under identical conditions, and cell culture medium supplements were provided according to the manufacturer's instructions. To ectopically overexpress c-Src kinase protein, subconfluent SW480 and T84 cells were transfected with 0.4 μg of pBABE-puro expression plasmid carrying cDNA from a c-Src gene. Stable clones of the T84 cell line were selected in F12/DMEM medium supplied with 0.5 μg of puromycin for 3 weeks. In the same way, stable clones of the SW480 cell line were selected in L15 Leivobitz medium supplied with 0.5 μg of puromycin. As a control, subconfluent SW480 and T84 cells were transfected with 0.4 μg of DNA containing an empty pBABE-puro expression plasmid. Positive clones were selected for protein expression measured by Western blotting. The entire set of transfected clones was used as a stable pool for transfection.
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7

Cell Line Authentication and Wnt Signaling Assays

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Cell lines were purchased from the European Collection of Cell Cultures (HEK293T and HCT-116 in 2007, COLO320 in 2011; SW480 and DLD1 in 2013). RKO cells were kindly provided by Doug Winton (University of Cambridge; in 2012). All cell lines were authenticated by STR DNA profiling. Upon receipt, cells were frozen, and individual aliquots were taken into culture, typically for analysis within <10 passages. For SW480 and COLO320 cells, truncated APC protein was monitored by Western blot analysis (see Results). Cells were grown and transfected for Wnt reporter assays and indirect immunofluorescence as described (22 (link)). Cytotoxicity assays were done as described (19 (link)). An SW480 cell line with integrated TOP-GFP reporter (25 (link)) was isolated by negative selection and cloning of stable transfectants, and GFP was monitored by fluorescence-activated cell sorting (FACS). Standard inhibitor treatment was for 24 hours (2.5 μM XAV939, or 25 μM CA), unless specified otherwise.
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8

Cell Culture and Maintenance Protocol

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DLD-1, LOVO, HT29, SW480, SW1116, WiDR, and HCT116 cells were purchased from the European Collection of Cell Cultures (Salisbury, UK), and SW620 cells were purchased from the American Type Culture Collection (Manassas, VA, USA). COLO205, HCT-15, and LS174T cells were provided by the Cell Resource Center for Biomedical Research, Tohoku University (Sendai, Japan). COLO201 cells were provided by the Japanese Collection of Research Bioresource (Tokyo, Japan), and COLO-320 cells were provided by RIKEN Bio-Resource (Tsukuba, Japan). The cells were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum (FBS) and 2 mM glutamine at 37°C in humidified air containing 5% CO2. Cells were used when in the exponential growth phase.
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