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Leica em afs

Manufactured by Leica camera
Sourced in Germany

The Leica EM AFS is a high-performance automated freeze substitution system designed for processing biological samples. It provides controlled freezing, substitution, and embedding of specimens in a single, automated process. The core function of the Leica EM AFS is to prepare samples for subsequent analysis or observation using electron microscopy techniques.

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4 protocols using leica em afs

1

Ultrastructural Analysis of Fungal Hyphae and Conidia

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Hyphae and conidia from PDA cultures grown for 7 days were used for TEM observations. Samples were frozen in a high-pressure freezer (Leica EM HPM100; Leica). Fast-frozen samples were then immersed into a freezing tube containing osmic acid (2%) and placed into the freeze substitution device (Leica EM AFS; Leica) at –90°C for 3 days. They were then slowly warmed to 4°C. Following freezing substitution, samples were rinsed four times with 100% acetone at room temperature. Dehydrated specimens were slowly infiltrated with SPI Pon 812 resin by placing them in mixtures of acetone and resin of different grades (25, 50, 75, and 100% [v/v]). The liquid resin was then polymerized at 60°C for 48 h. Ultrathin sections were cut using an ultramicrotome (Leica EM UC6; Leica) equipped with a diamond knife and placed on a TEM grid. The emulsion was observed using TEM (FEI Tacnai Spirit) at 100 kV. Four cultures of each strain were observed.
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2

High-Pressure Freezing and Freeze Substitution

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Cells were transferred into sample holders with a depth of 200 μm and a diameter of 1.2 mm with a small amount of culture medium. Cryofixation was performed by means of a Leica EM PACT high pressure freezer (Leica Mikrosysteme GmbH, Vienna, Austria) within milliseconds at about 2,000 bar. Eppendorf tubes with the sample holders containing the fixed specimens were filled with a precooled mixture made of 2% osmium tetroxide and 0.05% uranyl acetate in acetone and placed in a Leica EM AFS (Vienna, Austria) for freeze substitution. The AFS was programmed as follows: 60 h at −80 °C, followed by a temperature increase at a rate of 10 °C per hour for 5 h to −30 °C, 4 h at −30 °C, and another temperature increase at a rate of 2.5 °C per hour for 20 h to 20 °C, and finally 10 h at 20 °C. After freeze-substitution, the samples were rinsed three or four times in anhydrous acetone followed by three times washing for 10 min each in propylene oxide before embedding in Agar Low Viscosity Resin (ALVR; Agar scientific, Stansted, UK). The embedding was done with a propylene oxide:ALVR ratio of 3:1, 1:1, and finally 1:3. Next, the samples were placed for 4 d in a desiccator for polymerization and finally for 24 h in an oven at a temperature of about 60 °C.
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3

Freeze Substitution and Epon Embedding for Enhanced Contrast

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Frozen samples were collected in liquid nitrogen and transferred into a freeze-substitution chamber (Leica EM AFS; Leica, Germany), where they were freeze substituted for 12–14 hours at −90 °C in acetone containing 1% osmium tetroxide (OsO4; Electron Microscopy Sciences, Germany) to enhance contrast and simultaneously stabilize the glycocalyx. Subsequently, the temperature was gradually increased (5 °C/1 h) to 20 °C. Afterwards, the cells were centrifuged (1000 rpm, 3 min), washed with acetone (Roche, Germany) and centrifuged again. After rinsing several times with acetone, the dehydrated samples were infiltrated first with HPMA (2-hydroxypropyl methacrylamide; Sigma-Aldrich, Germany), centrifuged at 3000 rpm for 5 min and finally infiltrated overnight with HPMA-Epon mix (1:1). Suspension cells were further centrifuged at 5000 rpm for 5 min and infiltrated with pure freshly prepared Epon for several hours. Finally, the samples were embedded in Epon and polymerized overnight at 60 °C.
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4

Cryofixation and Freeze Substitution Protocol

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Since the method is described in detail in Gruber et al. (2018b), only the main steps are mentioned here. The live cells were transferred into sample holders with a minute amount of culture medium and placed into a Leica EM PACT high‐pressure freezer (Leica Mikrosysteme GmbH, Vienna, Austria) for cryofixation. The sample holders containing the fixed specimens were put in Eppendorf tubes filled with a precooled mixture of 2% osmium tetroxide and 0.05% uranyl acetate in acetone to perform freeze substitution in a Leica EM AFS (Vienna, Austria). Afterwards, the samples were rinsed in anhydrous acetone and washed in propylene oxide before being embedded in Agar Low Viscosity Resin (ALVR; Agar scientific, Stansted, UK). Next, the samples were placed in a desiccator and finally in an oven for polymerisation.
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