The largest database of trusted experimental protocols

16 protocols using anti cd8 pe cy5

1

Lymph Node Immunophenotyping by Flow Cytometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following extracellular, anti-human monoclonal antibodies were used for lymph node immunophenotyping: anti-CD3 PE-Cy 7, anti-CD8+PE-Cy 5, anti-CD4 FITC, anti-CD62L PE-Cy 5, anti-CD69 FITC, anti-CD152 (CTLA-4) PE, anti-CD11c PE-Cy 5, anti-CD86 PE-Cy 7, anti-HLA-DR PE, anti-CD3 FITC, anti-CD14 FITC, anti-CD16 FITC, anti-CD19 FITC, anti-CD123 PE-Cy 7, anti-CD141 PE, anti-CD68 PE-Cy 5, anti-CD20 PE, anti-CD56 PE, anti-CD279 (PD-1) APC, anti-CD11b PE, anti-CD64 FITC (BD Pharmingen, San Jose, CA).
The human monoclonal antibodies, anti-CD4 PE-Cy 5 and anti-CD25 PE, were purchased from Biolegend (San Diego, CA) and used in conjunction with intracellular staining with anti-FoxP3 FITC for the quantification of regulatory T cells. Cell death was determined by propidium iodine staining (eBioscience, San Diego, CA USA). Four-color flow cytometry was performed on a Guava 8HT flow cytometer (EMD Millipore, Billerica, MA USA) capturing 25,000 events for all samples. Results were analyzed using Guava Soft Incyte (EMD Millipore, Billerica, MA USA).
+ Open protocol
+ Expand
2

FACS Analysis of Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for FACS. Rat anti-mouse anti-CD16/CD32 (Fc Block, BD Biosciences, San Jose, CA, USA; #553141, 1:50); anti-CD4-PE-Cy7 (Thermo Scientific, Waltham, MA, USA, #25-0042-81, 1:100); anti-CD8-PE-Cy5 (BD Biosciences, San Jose, CA, USA, #553034, 1:100); anti-CD19-PE-Cy7 (Biolegends, San Diego, CA, USA, #115520, 1:100); and hamster anti-mouse anti-CD3-APC (Biolegends, USA, #100312, 1:100).
+ Open protocol
+ Expand
3

Cytokine Profiling of Activated Splenocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Splenocytes were obtained from mice and incubated at 37 °C for 6 h in 48-well plates coated with anti-CD3 and anti-CD28 antibodies (1 mg ml−1 each; eBioscience, San Diego, CA, USA). Cells were stained for 30 min at 4 °C with surface-specific antibodies (anti-CD3-allophycocyanin, anti-CD4-FITC and anti-CD8-PE–Cy5; BD Biosciences, Franklin Lakes, NJ, USA) and then fixed and permeablized through incubation for 10 min in 4% paraformaldehyde at room temperature. Cells were incubated for 30 min at room temperature with antibodies specific for candidate cytokines (anti-IFN-γ–PE, -IL-17–PE, -IL-4–PE and -IL-10-PE; BD Biosciences) and then analyzed on a FACSCalibur flow cytometer (BD Biosciences) using the CellQuest software (CellQuest, Largo, FL, USA).
+ Open protocol
+ Expand
4

Mouse and Human gp100 Peptide Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse gp10025–33 (mgp100, EGSRNQDWL) and human gp10025–33 (hgp100, KVPRNQDWL) peptides were synthesized by Peptron (Daejeon, Korea). CD8 microbeads were purchased from Miltenyi Biotec (Auburn, AL, USA). All antibodies used for flow cytometry were purchased from BD Bioscience, including anti-Thy1.1-FITC, anti-CD3-FITC, anti-B220-FITC, anti-CD62L-FITC, anti-Ly-6C-FITC, anti-CD19-PE, anti-CD8-PE, anti-CD44-PE, anti-CD8-PE-Cy5, anti-Thy1.1-PE-Cy5, anti-CD11b-PE-Cy5, anti-CD4-APC, anti-CD8-APC, and anti-CD45-APC. Recombinant human IL-2 (Proleukin) was purchased from Novartis, and the Fc fusion protein of human IL-7 (IL7-Fc), which consist of the extracellular domain of human IL-7 (aa 26–177) fused to the N-terminus of the Fc portion of a mutant human IgG1, was obtained from AdipoGen (Seoul, Korea). The CellTrace CFSE Cell Proliferation Kit was purchased from Invitrogen (Carlsbad, CA, USA).
+ Open protocol
+ Expand
5

Multiparametric Flow Cytometry for T-cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
For flow cytometry, splenocytes were stimulated with 0.7 μl/ml of 50 ng/ml PMA and 500 ng/ml IO, and then 1μg/ml of berefeldinA was added to retain the cytokine in the cytoplasm. After incubation for 4 h at 37°C with 5% CO2, these cells were stained for CD4 or CD8 surface markers using anti-CD4-PEcy5 or anti-CD8-PEcy5 antibodies (all from BD Biosciences) in separate tubes and incubated for 30 min at 4°C in the dark,. For IFN-γ and IL-4 intracellular staining after fixation and permeabilization using a Cytofix/Cytoperm Plus Fixation/Permeabilization Kit with BD Golgi PlugTM (cat no.555028), cells were stained with anti-IFN-γ-FITC and anti-IL-4-PE antibodies and incubated for 30 min at 4°C in the dark. Stained cells were analyzed using FACSCalibur (BD Biosciences).
+ Open protocol
+ Expand
6

Enrichment and Transfer of 2C CD8+ T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD8+ T cells were enriched from 2C splenocytes by negative selection using a CD8+ T cell isolation kit (Miltenyi Biotec, Auburn, CA) according to the manufacture's instruction. After the negative isolation the CD8+ T cells were stained with the anti-2C TCR-FITC mAb (clone 1B2), anti-CD3-PE (BD-Pharmingen) and anti-CD8-PECy5 (BD-Pharmingen) to evaluate the purity of the population. The isolated 2C CD8+ T cells (3 × 106) were adoptively transferred by i.v. injection in naïve B6 mice.
+ Open protocol
+ Expand
7

Intracellular Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were centrifuged at 3000 rpm for 2 min and recovered in blocking buffer (PBS plus 5 per cent FBS and 1 per cent AB human serum (Lonza)). After 20 min of incubation at room temperature, cells were centrifuged and permeabilized with Cytofix/Cytoperm (BD Biosciences) for 20 min at room temperature. Cells were then washed in Perm/Wash (BD Biosciences) and stained with an anti-alphavirus antibody (clone 1A4B.6) at 1:200 (vol/vol) dilution in Perm/Wash, followed by an Alexa Fluor 488 conjugated anti-mouse IgG antibody (Invitrogen) diluted at 1:400 (vol/vol) in Perm/Wash. Lastly, cells were incubated with a mixture of the following monoclonal antibodies at 1:200 (vol/vol) diluted in blocking buffer: anti-CD4-PE, anti-CD8-PE-Cy5, anti-CD19-PE-Cy7, anti-CD14-BV421 and anti-CD3-APC-Cy7 (BD Biosciences). Cells were washed twice with Perm/Wash between all incubations and were recovered in PBS plus 1.5 per cent paraformaldehyde before flow cytometry analysis on a FACSCanto II cytometer (BD Biosciences).
+ Open protocol
+ Expand
8

Analyzing NK and T Cell Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
Responses of NK cells and T cells were assessed as described previously.15 (link) Briefly, cells were stained with fluorophore-labelled monoclonal antibodies to cell surface molecules, fixed, permeabilized and stained for intracellular molecules using a Cytofix/Cytoperm kit (BD Biosciences). Cells were analysed by flow cytometry on an LSR II (BD Biosciences). Samples with fewer than 100 NK cells in each subset were excluded. The following reagents were used: anti-CD56-phycoerythrin (PE) -Cy7, anti-CD16-allophycocyanin (APC) -H7, anti-CD4-Pacific Blue, anti-IFN-γ-e780, anti-IFN-γ-APC, anti-CD3-V500 and anti-CD69-phycoerythrin-cyanine5 (PE-Cy5) (all BD); anti-CD8-PE-Cy5, anti-CD25-PE, anti-IL-18Rα-PE, anti-CD62L-PE-Cy5, anti-CD57-e450 and anti-IL-2-APC (all e-Biosciences/Affimetrix, Hatfield, UK). Anti-IL-12Rβ2 monoclonal antibody was obtained from R&D Systems (Oxford, UK) and conjugated to PE-Cy5 using an Easylink PE/Cy5® Conjugation Kit (Abcam, Cambridge, UK).
+ Open protocol
+ Expand
9

Flow Cytometric Analysis of Peripheral Blood Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The frequencies of peripheral blood CD4+, CD8+, CD25+, and HLA-DR+ T lymphocytes, and HLA-DR-positive monocytes were determined by flow cytometry. Whole blood was stained with fluorochrome-conjugated monoclonal antibodies for 20 minutes at room temperature, protected from light. The following antibodies (BD Biosciences, San Jose, Ca, USA) were used: anti-CD25-FITC, anti-CD8-PE-Cy5, anti-CD3-PE, anti-CD4-PE-Cy5, anti-CD14-PE, and anti-HLA/DR-FITC. The values were described as a percentage and as the MFI. RBCs were lysed (DN RBC Lysis Buffer; DiNonA Inc., Seoul, Korea) after incubation with fluorochrome-conjugated antibodies. Cells were washed once with and resuspended in phosphate buffered saline and were analyzed on a FACSCalibur Flow cytometer using the CellQuest software (both from BD Biosciences).
+ Open protocol
+ Expand
10

Flow Cytometry Analysis of Intracellular Notch1

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole blood was permeabilized and fixed using cytofix/cytoperm (BD Pharmingen, San Jose, CA, USA) according to manufacturer’s protocol followed by staining for 20 min at room temperature in the dark with cocktail of antibodies including anti-CD4-APC, anti-CD25-FITC, anti-FOXP3-PE, anti-PD1-PeCy7, anti-IL10-APC, anti-CD127-APC, anti-CD8PeCy5, anti-NOTCH1 PE, and anti TGF-β APC (BD Pharmingen, CA, USA). After staining, RBCs were lysed using BD FACS lysing solution (BD Pharmingen, San Jose, CA, USA) as per manufacturer’s instructions.
Anti-Notch1 PE antibody (clone mN1A) was procured from eBiosciences, CA, USA; mN1A antibody reacts with the intracellular domain of human Notch1. The mN1A antibody has a low affinity for the full-length (unprocessed or heterodimeric cell surface) forms of Notch1. Therefore, Notch1 expression was considered intracellular not surface expression.
More than 50,000 cells were acquired for flow-cytometric analyses on BD FACS Caliber and the results were analyzed using the TreeStar Flow-Jo software version 8.8.7.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!