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6 protocols using deptor

1

Western Blot Analysis of Neural Markers

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Cell lysates were created and Western blotting conducted as described (24 (link)), blocking without detergent. Membranes were probed with antibodies for MAF (Imgenex), SOX9 (Santa Cruz), S100β (Dako), MBP (Chemicon), BLBP (Millipore), DEPTOR (Novus), cleaved-caspase 3, pS6, S6, p4E-BP1, 4E-BP1, p473AKT, AKT, and β-ACTIN (Cell Signaling) as a loading control. Horseradish peroxidase-conjugated secondary antibodies (BioRad) were used with ECL Plus developing system (Amersham Biosciences).
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2

Immunofluorescence and Immunohistochemistry Protocol

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Cultured cells were fixed, permeabilized with 0.2% Triton-X 100 and blocked with 10% normal serum for 1h at room temperature (19 (link)). Primary antibodies used were S100β (Dako), MBP (Chemicon), and BLBP (Millipore). Secondary incubations used host-appropriate TRITC conjugated antibodies (Jackson Immunoresearch). Nuclei were labeled with DAPI (Sigma-Aldrich) and microscopic images acquired with ImageJ software (NIH) on a Zeiss Axiovert 200M. Tumor paraffin sections stained for MAF (Imgenex), pS6, pERK (Cell Signaling), and DEPTOR (Novus) were visualized with DAB.
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3

Immunofluorescence and Immunohistochemistry Protocol

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Cultured cells were fixed, permeabilized with 0.2% Triton-X 100 and blocked with 10% normal serum for 1h at room temperature (19 (link)). Primary antibodies used were S100β (Dako), MBP (Chemicon), and BLBP (Millipore). Secondary incubations used host-appropriate TRITC conjugated antibodies (Jackson Immunoresearch). Nuclei were labeled with DAPI (Sigma-Aldrich) and microscopic images acquired with ImageJ software (NIH) on a Zeiss Axiovert 200M. Tumor paraffin sections stained for MAF (Imgenex), pS6, pERK (Cell Signaling), and DEPTOR (Novus) were visualized with DAB.
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4

Phosphorylated p70 and DEPTOR Immunohistochemistry

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Four um-thick sections of tissue blocks were cut and stained using the Vectastain Elite ABC HRP kit (Vector, Burlingham, CA) in a two-step IHC technique as previously described (8 , 9 (link)). Antigen retrieval was performed and slides were incubated with primary antibody against phosphorylated p70 (1:500 dilution) from InVitrogen (Carlsbad, CA) or DEPTOR (1:750 dilution) from Novus (Littleton, CO).
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5

Antibody Source Identification

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Antibodies were obtained from the following sources: FLAG M2 from Sigma-Aldrich (St. Louis, MO); DEPTOR from Novus; tubulin from Abcam (Cambridge, UK); raptor, rictor, and mSin1 from Bethyl laboratory (Montgomery, TX); mTOR from Santa Cruz Biotechnology (Santa Cruz, CA); and all other antibodies from Cell Signaling Technology (Danvers, MA). All secondary antibodies were from Jackson ImmunoResearch Laboratories Inc. (West Grove, PA). 1,2-Dioctanoyl-sn-glycero-3–PA was obtained from Avanti Polar Lipids (Alabaster, AL). All other reagents were from Sigma-Aldrich (St. Louis, MO).
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6

Western Blot Analysis of Neural Markers

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Cell lysates were created and Western blotting conducted as described (24 (link)), blocking without detergent. Membranes were probed with antibodies for MAF (Imgenex), SOX9 (Santa Cruz), S100β (Dako), MBP (Chemicon), BLBP (Millipore), DEPTOR (Novus), cleaved-caspase 3, pS6, S6, p4E-BP1, 4E-BP1, p473AKT, AKT, and β-ACTIN (Cell Signaling) as a loading control. Horseradish peroxidase-conjugated secondary antibodies (BioRad) were used with ECL Plus developing system (Amersham Biosciences).
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