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6 protocols using anti igm fab2 fragments

1

BTK Inhibition Effects on B Cell Functions

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Peripheral blood mononuclear cells (PBMCs) were isolated, frozen and thawed as described previously [19 (link)]. For all cultures, 1 × 106 PBMCs/ml were cultured with or without 1000 nM BTK blocker (BMS-986142, kindly provided by Bristol–Myers Squibb, New York, NY, USA [20 ]). The BTK blocker was pre-incubated for 1 h.
To investigate the effect of BTK inhibition on B cell cytokine production, PBMCs were cultured for 3 days with 1000 nM anti-IgM Fab2 fragments (Jackson ImmunoResearch, West Grove, PA, USA) and restimulated for the last 4.5 h with 50 ng/ml phorbol myristate acetate and 2 mM calcium-ionophore in the presence of 10 μg/ml brefeldin A (Sigma–Aldrich, St. Louis, MO, USA).
To assess the effect of BTK inhibition on plasma cell formation, PBMCs were cultured for 7 days with 1000 nM anti-IgM Fab2 fragments (Jackson ImmunoResearch) and 100 ng/ml B cell activating factor (BAFF; PeproTech Inc., Rocky Hill, NJ, USA).
To determine the effect of the BTK blocker on (auto)antibody production, PBMCs were cultured for 12 days with 1000 nM anti-IgM Fab2 fragments (Jackson ImmunoResearch), 100 ng/ml BAFF and 100 ng/ml IL-21 (ImmunoTools, Friesoythe, Germany) [21 (link)].
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2

Calcium Flux Assay for B Cells

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Splenocytes were resuspended at 15 × 106 cells/ml in RPMI medium containing 1% FCS, 10 mM HEPES, 1 mM MgCl2, 1 mM EGTA, and penicillin-streptomycin 1% and 1 μM Indo-1 (Invitrogen). Cells were incubated in a 37°C incubator for 30 minutes. Following incubation, a 5-fold volume of the same buffer (without Indo-1) was added and the cells were centrifuged (300 g, 5 minutes). PBMCs were stained with anti-mouse B220 and anti-mouse CD5, for 30 min and washed 2×. Cells were stored on ice in calcium flux running buffer (HBSS, 1% FCS, 1mM CaCl2) and an aliquot (0.5 ml; 1 × 106 cells) was warmed (37°C, 5 minutes) prior to initiating calcium flux measurements. During flow cytometry acquisition and analysis B220+CD5 cells were gated to establish the B-cell population. Cells were stimulated with liposomes or anti-IgM F(ab)’2 fragments (Jackson ImmunoResearch) and Indo-1 fluorescence (violet vs. blue) was monitored by flow cytometry (500–1000 events/s) for 3–5 minutes at 37°C. Stimulation always took place 10 seconds after starting acquisition so that background could be established. For experiments involving GFP+ vs GFP mice, the GFP is expressed in all tissues and is not cell type specific, the splenocytes were mixed at a 1:1 ratio prior to loading with Indo-1. Data were analyzed using FlowJo using the kinetics functions.
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3

Splenic B cell expansion assay

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Splenic B cells were purified by negative selection using anti-CD43 magnetic beads (Miltenyi, Bergisch Gladbach, Germany) according to manufacturer’s protocol. Cells were stimulated at 1×106 cells/ml in 96-well plates with 50 μg/ml LPS (Sigma Aldrich, St. Louis, MO), 10 μg/ml polyclonal anti-IgM, F(ab′)2 fragments (Jackson ImmunoResearch, West Grove, PA), or 10 μg/ml anti-CD40 (HM40-3) (BioLegend) + 100 U/ml IL-4 (Peprotech, Rocky Hill, NJ). After 72 hours, expansion was measured by flow cytometry using AccuCount 5.27 μm Blank Particles (Spherotech, Lake Forest, IL) according to manufacturer’s protocol.
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4

Calcium Signaling in B Cells

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0.5–1×106 cells preloaded with the calcium-sensitive fluorescent dye Indo-1 (Invitrogen) were analyzed by flow cytometry (LSR Fortessa, BD Biosciences) upon application of 10 µg/mL anti-IgM F(ab')2 fragments (Jackson ImmunoResearch).
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5

Regulation of PIK3IP1 Expression in Activated B Cells

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Purified splenic B cells were harvested immediately or stimulated with media alone (RPMI 1640 + 10 % FBS + L-glut + pen/strep + β-ME) or 10 ug/ml anti-IgM F(ab)’2 fragments (Jackson Immunoresearch) for 1, 6, or 17 hours. In some experiments cells were pretreated for 15 minutes with vehicle (DMSO) or 10 uM Ly294002 (Sigma-Aldrich) prior to stimulation with anti-IgM. Total RNA prepared using an RNeasy Mini kit (Qiagen), and cDNA subsequently generated with a High Capacity cDNA Reverse Transcription kit (Thermofisher). PIK3IP1 levels were measured by real time quantitative PCR using Taqman reagents (Thermofisher) for PIK3IP1 and the internal control GAPDH and a Biorad CFX96 Real-Time System. Results were normalized to GAPDH using the delta-Ct method.
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6

Evaluating B Cell Signaling Pathways

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Purified splenic B cells were stimulated at 37oC for varying times from 1 minute to 1 hour with media alone (RPMI 1640 + 10 % FBS + L-glut + pen/strep + β-ME), 10 ug/ml anti-IgM F(ab)’2 fragments (Jackson Immunoresearch), 10 ug/ml anti-CD40 (IC10, Invitrogen), 10 ug/ml anti-IgM F(ab)’2 fragments plus 10 ug/ml anti-CD40, or 0.1, 0.3, or 1 ug/ml CD40L (R&D Systems). Cells were lysed in 2x Laemmli sample buffer (Biorad) and equal cell equivalents subjected to SDS page using a 4–15% gradient gel (Biorad). Gels were transferred to nitrocellulose (GE Healthcare) and blocked in 5% milk. Blots were probed overnight at 4oC with rabbit monoclonal antibodies against pAkt S473 (Cell Signaling Technology), pS6 (Cell Signaling Technology), and β-actin (Cell Signaling Technology) and subsequently for 2 hrs at room temperature with goat anti-rabbit HRP (Biorad). Blots were washed three times in TBST after each antibody incubation. Bands were detected with Clarity ECL reagent (Biorad) and imaged and quantified with a Chemidoc Imaging system (Biorad) and Image Lab software (Biorad).
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