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Cellsens v3

Manufactured by Olympus
Sourced in Japan

CellSens V3.2 is a software application designed for image acquisition, analysis, and processing in a laboratory setting. It provides a user-friendly interface for managing and manipulating digital images captured from microscopes and other imaging devices.

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8 protocols using cellsens v3

1

Thermotolerance of Sporothrix schenckii

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We observed the growth of 26 isolates of S. schenckii on various media (SDA, potato dextrose agar [PDA], and BHIA) and at various temperatures (30, 35, 37, and 40 °C). The growth and transitions to the mycelial and yeast phases, influenced by the culture medium and temperature, were closely monitored under a stereomicroscope (SZ2-ILST, Olympus) for 14 days. The colony diameter was measured by calibrating the ocular micrometer on the imaging software (cellSens V3.2 software, Olympus). The microscopic features of the mold form were evaluated using the slide culture technique on PDA, incubated at 30 °C for 14 days. Morphologies of the yeast-like and yeast forms were obtained from culturing on BHIA at 30 and 35 °C for 14 days. The slides were examined under a microscope (BX43, Olympus), and the cells were measured by a calibrated ocular micrometer on the imaging software (cellSens V3.2, Olympus). The percent growth inhibition (% GI) was calculated using the following formula: [(average colony diameter at low temperature-average colony diameter at high temperature)/average colony diameter at low temperature] × 100. Isolates exhibiting more than 50% GI were classified as having low thermotolerance, whereas those showing less than 50% GI were classified as having high thermotolerance [12 (link)].
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2

Fluorescent Staining of Yeast Cells

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Cells were grown to mid-exponential phase at 30 °C in YPD and pelleted by centrifugation for 1 min at 4000 rpm (1500 × g) then resuspended in PBS. 5 μL cell suspension was combined with 1 μL of 0.1 g/L Calcofluor White stain and applied to a glass microscope slide. Alternatively, overnight cultures were prepared for each isolate and wild-type strain in yeast extract peptone dextrose (YPD) at 30 °C, with rotation, and then subcultured to mid-log phase before washing twice in 1× PBS and staining with FM4−64 (BioTracker 640 Red C2(FM4−64) Synaptic Dye, Millipore Sigma) at 10 µM for 10 min. Cells were visualized using an Olympus IX70 Epifluorescent Microscope fitted with a Hamamatsu C11440 camera and taken with Olympus CellSens v. 3.2 software.
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3

Morphological Analysis of Cryptosporidium Isolates

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Three randomly selected, genetically characterized isolates of lineages A and B, and the single isolate of lineage C, were subjected to morphological analysis. Stool specimens were concentrated using formalin–ethyl acetate sedimentation and wet mounts were examined under differential interference contrast (DIC) and ultraviolet (UV) fluorescence. Length and width of a minimum of 20 oocysts per sample were measured via Olympus cellSens V3.2 software and an Olympus BX51 compound microscope by the same operator. Minimum and maximum dimensions from each lineage were compared using unpaired 2-tailed t-tests. The appearance of unsporulated oocysts from each lineage was also examined in modified acid-fast (Kinyoun) stained smears (1000×) and/or under a UV fluorescence microscope (500×).
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4

Morphological Analysis of Cryptosporidium Isolates

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Three randomly selected, genetically characterized isolates of lineages A and B, and the single isolate of lineage C, were subjected to morphological analysis. Stool specimens were concentrated using formalin–ethyl acetate sedimentation and wet mounts were examined under differential interference contrast (DIC) and ultraviolet (UV) fluorescence. Length and width of a minimum of 20 oocysts per sample were measured via Olympus cellSens V3.2 software and an Olympus BX51 compound microscope by the same operator. Minimum and maximum dimensions from each lineage were compared using unpaired 2-tailed t-tests. The appearance of unsporulated oocysts from each lineage was also examined in modified acid-fast (Kinyoun) stained smears (1000×) and/or under a UV fluorescence microscope (500×).
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5

Histological Analysis of Lung Nodules

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Fixed and embedded lung tissues were sliced into 5-μm sections to obtain five serial sections per lung. Sections were stained with H&E and the number and size of nodules were determined using a histology microscope. Tumor size (area of nodules) was calculated using the measurement tool provided with cellSens v3.2 imaging software (Olympus America).
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6

Immunofluorescence Analysis of Protein Co-Localization

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Cells were grown on coverslips in 6-well plates and transfected with the indicated plasmids or siRNA using Lipofectamine 2000. The cells were fixed in 4% paraformaldehyde (Sigma, P6148) and then permeabilized in 1% Triton X-100 (Sigma, X100) for 5 min. After washing with PBS, cells were incubated with the indicated primary antibodies for 1 h at room temperature. After extensive washes with PBS, cells were incubated with Alexa Fluor 488- or Alexa Fluor 594-conjugated anti-mouse IgG or anti-rabbit IgG antibodies for 30 min at room temperature. After PBS wash, the nuclei were stained with DAPI (Sigma, D9542; 1:10000 in PBS). The coverslips were mounted onto glass slides and visualized with a confocal laser scanning microscope (OLYMPUS, FV3000).
The co-localization analysis of hARTC enzymes with calnexin or other proteins in the cells was performed with cellSens V3.2 software (OLYMPUS). The cellSens V3.2 was used to select positive regions as regions of interest, and fluorescence intensity was calculated by ImageJ.
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7

Fluorescence Microscopy of ICG-CrEL Treated Cells

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CT26 cells were seeded in imaging dishes (AGC Techno Glass, Shizuoka, Japan) and allowed to adhere overnight. The attached cells were treated with PBS containing indocyanine green (ICG) and CrEL (ICG, 0.1 mg/mL; and CrEL, 0.5%) for 24 h at 37 °C. After washing with PBS, the cells were observed using a fluorescence microscopy system (IX73) and cellSens V3.1 software (Olympus, Tokyo, Japan) equipped with a mirror unit (IRDYE800-33LP-A-U01; Semrock, Lake Forest, IL, USA) and an objective (40 × magnification, aperture 0.95; UPLSAPO40X, Olympus) at 20 °C.
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8

Bacterial Visualization and Dye Stability Analysis

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Bacterial solutions (20 µL, 5 × 108 CFU mL−1) were plated on glass coverslips (AGC Techno glass, Shizuoka, Japan) and then observed using a fluorescence microscopy system (IX73) and cellSens V3.1 software (Olympus) equipped with a mirror unit (IRDYE800‐33LP‐A‐U01; Semrock, Lake Forest, IL) and objectives (×60 magnification, aperture 1.35; UPLSAPO60X, Olympus or ×100 magnification, aperture 0.95; PLFLN100X, Olympus) at 20 °C. Besides, the NIR FL images and NIR FL intensity of ICG‒CRE‒A‐gyo were analyzed using a light microscopy system (BZ‐X800, Keyence, Osaka, Japan) and ImageJ software (Fiji). Before analyzing, ICG‒CRE‒A‐gyo was incubated in fresh PBS buffer for 2, 4, 12, and 24 h at 25 and 4 °C, respectively.
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