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2 protocols using mouse anti β1 integrin

1

Immunofluorescence Staining of Integrin Proteins

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Cells were fixed using 4% paraformaldehyde/PBS for 15 min at room temperature, washed three times with washing buffer (0.1% Tween-20/PBS, 5 min), and permeabilized with 1% Triton X-100/PBS for 30 min. Samples were incubated in blocking buffer (3% BSA, 2% goat serum in PBS) for 30 min, then incubated with various primary antibodies including mouse anti-YAP (Santa Cruz Biotechnology, sc-101199), mouse anti-αVβ3-integrin (Abcam ab78614), mouse anti-β1-integrin (Abcam ab24693), rabbit anti-paxillin (Abcam ab32084), rabbit anti-pFAK (Abcam ab81298), mouse anti-RUNX2 (Abcam ab76956) overnight at 4 °C on a shaker. All antibodies were diluted in buffer at 1:100 except YAP antibody was diluted at 1:300. After washing, samples were incubated with corresponding secondary antibodies including Alexa 488 Goat-anti-mouse (Invitrogen A11001), rhodamine goat-anti-rabbit (Millipore AP132), rhodamine-phalloidin (Sigma P1951) for 1 h at room temperature on a shaker. All secondary antibodies were diluted at 1:300. Cell nucleus counter stain was performed using Hoeschst nuclear stain (Cell Signaling Technology 4082S, 2 ug/mL). Samples were washed with washing buffer (three times, 5 min per wash) before being imaged using a confocal microscope (40x oil immersion, Leica SP8 confocal system). All images were processed using open-source Fiji software [35 (link), 36 (link)].
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2

Cytokine Signaling and Cell Migration

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Cytokine and inhibitors; purified recombinant human HGF was obtained from Peprotech. The c-Met receptor inhibitor (PHA-665752 ≤ 1 μM), MAPK pathway inhibitor (PD98059 ≤ 40 μM), Arp2/3 complex inhibitor (CK-666 ≤ 200 μM) and CDC42 inhibitor (ML-141 ≤ 20 μM) were obtained from Cayman Chemical. The ROCK pathway inhibitor (Y27632 ≤ 7.5 μM) and FAK inhibitor (PF-562,271; 1 μM) were purchased from Merck. The PI3K pathway inhibitor (LY294002 ≤ 100 μM) and the Rac1 inhibitor (6-Thio-GTP≤50 μM) were obtained from Selleck Chemicals and Jena Bioscience, respectively. The functionally blocking β1-integrin antibody (≤10 μg/ml) and its mouse IgG1 isotype were purchased from Abcam.
Immunofluorescence; primary and secondary antibodies, rabbit anti-Met, and rat anti-α-tubulin were obtained from Invitrogen. Mouse anti-paxillin was obtained from BD Bioscience. Mouse anti–β1-integrin was obtained from Abcam. Alexafluor-conjugated secondary antibodies (488, 568, and 647 nm), Rhodamine phalloidin, DiO’, and DiOC18(3) (3,3′-Dioctadecyloxacarbocyanine Perchlorate) were all purchased from Invitrogen. The mitochondrial staining kit, red fluorescence-cytopainter, was purchased from Abcam. Vectashield mounting medium was obtained from Vector Laboratories Ltd., and DAPI was obtained from Invitrogen.
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