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2 protocols using hdac3

1

Histone Deacetylase Inhibitor Screening

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The primary antibodies used were anti: MEF2D (BD Bioscience); MEF2A (C-21), (Santa Cruz Biotechnology); MEF2C (15 (link)); Actin (Sigma-Aldrich); HDAC4 (16 (link)); HDAC5 (17 (link)); HDAC7 (18 (link)); HDAC9 (19 (link)); H3K27ac (ab4729) and H3K9ac (ab4441) (Abcam); Histone H3 (H0164, Sigma-Aldrich) HDAC3 (PA5-29026, Invitrogen). The following chemicals were used: SAHA (Cayman Chemicals); TMP195 (MedChemExpress), BML-210 (Sigma-Aldrich). The PAOA derivatives MC2983, MC2984, MC2985 and MC2991 were synthetized. All new compounds had spectral (1H NMR, ESI-MS) data in agreement with the structure. Full details of the syntheses will be reported elsewhere. NKL54 (N-(2-aminophenyl)-N'-[3-(trifluoromethyl)phenyl]heptanediamide) was synthesized by SIA Chemspace (Riga, Latvia).
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2

Antibodies and siRNAs for Investigating Signaling Pathways

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Rabbit polyclonal antibodies (pAbs) against Smad1/5 and goat pAb against COX2 were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Mouse mAbs against HDAC1, HDAC2, and HDAC3, and rabbit pAbs against HDAC4, HDAC6, HDAC7, phospho-Ser727-STAT3, phospho-Tyr705-STAT3, acetyl-STAT3, phospho-STAT5, STAT3, STAT5, ERK, phospho-ERK1/2, phospho-Smad1/5, phospho-JAK1, phospho-JAK2, JAK1, and JAK2 were purchased from Cell Signaling Technology (Beverly, MA). Mouse mAbs against Collagen II were purchased from Chemicon (Temecula, CA). The control siRNA and specific siRNAs of BMP-2, Smad1, Smad5, STAT3, STAT5, JAK1, JAK2, ERK1, ERK2, HDAC3, and HDAC4 were purchased from Invitrogen (Carlsbad, CA). Recombinant human leptin was purchased from PeproTech (Rocky Hill, NJ, USA) and Noggin was purchased from R & D Systems (Minneapolis, MN). BMP-2 ELISA KIT were obtained from “American Diagnostica” (Greenwich, CT, USA). HDAC inhibitor-TSA [21 –23 (link)] were purchased from Sigma (St Louis, MO). All other chemicals of reagent grade were obtained from Sigma.
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