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Imagequant software version 8

Manufactured by GE Healthcare

ImageQuant software version 8.1 is a data analysis tool designed for quantifying and analyzing images generated by various imaging systems. It provides tools for processing, analyzing, and quantifying a wide range of imaging data, including gels, blots, and autoradiographs.

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3 protocols using imagequant software version 8

1

Peptide ELISPOT Protocol for Antibody Detection

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For peptide ELISPOT the following peptides were designed:
peptide #1 - RVLAPALDSWGTGGGDYKDDD{LYS(BIOTIN)} (Genescript)
peptide #2 - LPKFSAPSASGPGGGDYKDDD{LYS(BIOTIN)} (Genescript)
peptide #3 - ESTRYQLWLPHQGGGDYKDDD{LYS(BIOTIN)} (Genescript)
control peptide - AVLAAALASWGTGGGDYKDDD{LYS(BIOTIN)} (Genescript)
In brief, 110 pg biotin-conjugated peptides were printed on nitrocelluose coated slides (10485323, Whatman) by SpotBot® 4 (Arrayit). For primary antibody human precleared serum (1:100) was used, for secondary antibody rabbit anti-human IgG (H&L) (HRP) (Abcam) was used. All incubations were done for 1 h at room temperature. Results were scanned using Ettan DigeImager (GE Healthcare Life Sciences) and images calculated using ImageQuant software version 8.1 (GE Healthcare Life Sciences).
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2

Platelet Protein Phosphorylation Analysis

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Washed platelets (4 × 108 or 8 × 108 cells/ml) were lysed in an equal volume of NP40 buffer (300 mM NaCl, 20 mM Tris base, 2 mM EGTA, 2 mM EDTA, 1 mM PMSF, 10 µg/ml aprotinin, 10 µg/ml leupeptin, 0.7 µg/ml pepstatin A, 2 mM sodium orthovanadate, 2% NP-40, pH 7.3), and proteins of interest were isolated using 1 μg/mL of appropriate antibodies. Detailed method is available in the supplementary information. Immunoblotting was performed using standard techniques as described in the supplementary information. Levels of phosphorylated proteins were detected using fluorophore-conjugated secondary antibodies and visualised using a Typhoon FLA 9500 fluorimeter (GE healthcare) and quantified using Image Quant software version 8.1 (GE healthcare). Protein loading was assessed through reprobing for actin or 14-3-3ζ.
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3

Peptide Display Immunoassay Protocol

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M13 phage particles displaying the relevant peptides were printed onto nitrocellulose coated glass slides (10,485,323, Whatman) using SpotBot® 4 arrayer (Arrayit) in four dilutions (1:2, 1:10, 1:100, 1:1000). 1xPBS-20% glycerol and mQ were used as negative controls and human IgG serial dilutions (12–50 ng/µl) as positive controls. Human serum or plasma (1:50), previously precleared to plastic and E. coli/wild type M13 phage antigens, was used as primary antibody while rabbit anti-human IgG H&L (HRP) (#ab6759, Abcam, RRID: AB_955,434) (1:1000) was used as a secondary antibody. Both antibody incubations were conducted at room temperature for 1 h with agitation. The presence of bound human IgG antibodies was detected using reaction with catalyzed Signal Amplification (CSA) System II, Biotin-Free, HRP, DAB+ (Dako, Agilent, Cat#: K1497), diluted in the substrate buffer (1:100). Results were visualised using Ettan DigeImager (GE Healthcare Life Sciences) and signals (image colour-intensities) quantified using ImageQuant software version 8.1 (GE Healthcare Life Sciences).
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