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Fret ab wizard

Manufactured by Leica camera

The FRET AB wizard is a specialized piece of lab equipment designed for Förster Resonance Energy Transfer (FRET) analysis. It provides a streamlined and automated workflow for the detection and quantification of FRET interactions between fluorescently labeled biomolecules.

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4 protocols using fret ab wizard

1

Multimodal Microscopy Techniques for DNA Repair

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Panel 1C was acquired with a ZEISS LSM 880 with Airyscan system equipped with a Plan-Apochromat 63×/1.40 Oil DIC M27 objective and using 488 and 561 nm wavelength lasers. Panels 2A,B S3A, S6A and S7B were acquired with a DeltaVision PersonalDV (Applied Precision) with either a Plan Apo 60x/1.42 NA or a UPlanSApo 100x/1.4 NA oil lenses. Panels 2F, 3B,H, S3B,C, S5 and S7A were acquired on a Leica TCS SP5 confocal microscope equipped with a HCX PL APO CS 63.0x/1.40 NA oil lens. FRET experiments were performed on HeLa cells using the Leica FRET AB wizard. Ku70(AF488)/Ku80(488 DyLight)/DNA-PKcs(488 DyLight) served as donors and LMNA (AF594 for Ku80 and DNA-PKcs FRET; AF555 for Ku70 FRET) as acceptor. Panels 3C,F were acquired with a OMX Structured Illumination Super-resolution Scope equipped with a PlanApo 60x/1.40 Oil DIC objective and using 488 and 568 nm wavelength lasers.
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2

Donor Dequenching FRET Experiments

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Acceptor photobleaching module (FRET AB Wizard) of the Leica software was used for donor dequenching experiments taken on a confocal microscope. A selected region of the cells transfected with liposome containing FITC-APBA/TRITC-fetuin was exposed to 543 nm laser (the excitation wavelength of TRITC) at high-power (80%) to photobleach the acceptor. One image was captured for each bleaching process. The fluorescence signals of donor before and after acceptor photobleaching were collected in the emission range of 500-530 nm with an excitation of 488 nm.
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3

Multimodal Microscopy Techniques for DNA Repair

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Panel 1C was acquired with a ZEISS LSM 880 with Airyscan system equipped with a Plan-Apochromat 63×/1.40 Oil DIC M27 objective and using 488 and 561 nm wavelength lasers. Panels 2A,B S3A, S6A and S7B were acquired with a DeltaVision PersonalDV (Applied Precision) with either a Plan Apo 60x/1.42 NA or a UPlanSApo 100x/1.4 NA oil lenses. Panels 2F, 3B,H, S3B,C, S5 and S7A were acquired on a Leica TCS SP5 confocal microscope equipped with a HCX PL APO CS 63.0x/1.40 NA oil lens. FRET experiments were performed on HeLa cells using the Leica FRET AB wizard. Ku70(AF488)/Ku80(488 DyLight)/DNA-PKcs(488 DyLight) served as donors and LMNA (AF594 for Ku80 and DNA-PKcs FRET; AF555 for Ku70 FRET) as acceptor. Panels 3C,F were acquired with a OMX Structured Illumination Super-resolution Scope equipped with a PlanApo 60x/1.40 Oil DIC objective and using 488 and 568 nm wavelength lasers.
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4

FRET-based Receptor Localization Imaging

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Prepared samples were placed into an Attofluor™ Cell Chamber (Fisher Scientific GmbH, Schwerte, Germany). Coverslips were washed once with HBSS (Hank’s Balanced Salt Solution) and the chamber was filled with 500 mL HBSS. The chamber was mounted onto a Leica SP8 confocal laser-scanning microscope. Cells were imaged using the Leica FRET-AB wizard with a HC PL APO CS2 40x/1.3 numerical aperture oil immersion objective. A 1.5 mW white light laser was set to 85% and a 560 nm laser line was used at 5% power for the donor imaging. For the acceptor imaging a 652 nm laser line at 2% power was used and for the bleaching step increased to 50% over 10 frames. 512 × 512 pixel images of the bottom cell-membrane expressing SNAP-tagged receptor-constructs were acquired with a hybrid detector in standard mode. Emission of donor channel was recorded within 575–640 nm and acceptor channel was acquired between 658 nm–776 nm. The zoom factor was set to 5.5 x resulting in a pixel-size of 0.103 µm and the laser scanning speed was set to 400 Hz. There were at maximum 2 cells taken for analysis per image. FRET efficiencies were calculated with the manufacturer’s Wizard tool based on the provided formula (see Supplementary Fig. 10). Potential vesicles close to the cell surface were excluded by the drawing of the region of interest.
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