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Clone 2a8

Manufactured by Merck Group
Sourced in United States

The Clone 2A8.2 is a laboratory instrument designed for use in molecular biology and genetics research. It is a specialized device for the amplification and analysis of DNA sequences. The core function of the Clone 2A8.2 is to perform polymerase chain reaction (PCR) assays, a widely used technique for the exponential replication of target DNA fragments.

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2 protocols using clone 2a8

1

Immunohistochemical Analysis of Metastatic Melanoma

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Tumor biopsies were not required as part of the study. However, serial archival tumor samples, collected before and during omaveloxolone treatment, of two patients with metastatic melanoma were available. Tissues were collected and preserved in formalin. Suitable areas were selected by a pathologist and sectioned into 5 μm sections placed on slides. Levels of iNOS and NT protein in tumor sections were determined by IHC using polyclonal rabbit anti-NOS2 (Abcam; ab3523) and mouse monoclonal anti-NT (Millipore; clone 2A8.2). IHC was performed with Dako Link 48 autostainer after high pH heat-induced epitope retrieval digestion. IHC was performed with appropriate positive and negative controls. Slides at 4× magnification were assessed by an independent pathologist blinded to collection time, using a qualitative intensity scale of negative, weak, moderate, or strong cytoplasmic staining. A quantitative scoring method was not possible due to scant tumor material.
From those individuals with sufficient available archival tumor tissue, gene mutational analysis was carried out on DNA extracted from archival tumor samples using PyroMark® PCR or Sequenom MassARRAY OncoCarta® platform according to the manufacturer’s protocol.
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2

Histological Analysis of Liver Necrosis

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Liver tissue was fixed in 10 % formaldehyde (Sigma-Aldrich), dehydrated, embedded in paraffin blocks, and sectioned into 5 μm slices. The sections were stained with hematoxylin and eosin (H&E; Sigma-Aldrich) for histology, and the necrosis grade was evaluated in 20 random 100 × images per animal, as described by Liu et al. [11 (link)] as follows: “0” indicated normal; “1” indicated necrotic cells in the first cell layer adjacent to the central vein; “2” indicated necrotic cells extending two to three cell layers from the central vein; “3” indicated necrotic cells extending three to six layers from the central vein; “4” indicated necrotic cells extending three to six layers and from one central vein to another; and “5” indicated necrotic cells throughout the section. The sections were deparaffinized and dehydrated for immunohistology, and the endogenous peroxide was inactivated with 3 % hydrogen peroxidase (Sigma-Aldrich). The sections were then blocked with 3 % normal goat serum (DAKO, Glostrup, Denmark) for 1 h, stained with primary antibodies against cytochrome P450 subfamily 2E1 (1:200), 4-hydroxynonenal (1:200, Abcam, Cambridge, MA, USA), or nitrotyrosine (1:50, clone 2A8.2, Millipore, Bedford, MA, USA) for 1 h at 37 °C and then incubated with an horseradish peroxidase (HRP)-detection kit (REALTM EnVision, DAKO) according to the manufacturer’s protocol.
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