Proteins were extracted in RIPA lysis buffer (0.05 M Tris-HCl, pH 7.4, 0.15M NaCl, 0.25% deoxycholic acid, 1% NP-40, 1 mM EDTA) freshly supplemented with 1X protease inhibitors and 1X phosphatase inhibitors. The cells were extracted with 10 sec of sonication and then on ice for 30 min. The lysates were centrifuged and the supernatants were transferred into new vials. Protein concentration was measured using the BCA assay Pierce method.
Samples were boiled (90°C) for 5 min in classical Laemmli buffer prior to western blotting. Twenty micrograms per lane of total proteins were separated by a gel 10% Mini-PROTEAN® TGX Stain-Free™ (tris glycine) Protein Gels (Biorad, Marne La Coquette, France) at 150 V for about 50min using the Mini-Protean III™ device (Bio-Rad) and then transferred to a
Trans-Blot® Turbo Mini 0.2 μm Nitrocellulose Transfer Packs (Bio-Rad) using the
Transblot-Blot® SD Semi-Dry Transfer Cell (Bio-Rad) at constant 25V for 7 min.
Membranes were then incubated with primary antibodies overnight (4°C) (
S2 Table). Bound antibodies were detected by using the
WesternBreeze Immunodetection Chemiluminescent System (Invitrogen, Fisher Scientific, Illkirch, France). The optical density of bands was visualized with the Image System (ChemiDoc, Biorad) and analyzed with
Quantity one-image analysis software (Bio-Rad Laboratories).
Plaisancié P., Buisson C., Fouché E., Martin P., Noirot C., Maslo C., Dupuy J., Guéraud F, & Pierre F. (2022). Study of the colonic epithelial-mesenchymal dialogue through establishment of two activated or not mesenchymal cell lines: Activated and resting ones differentially modulate colonocytes in co-culture. PLoS ONE, 17(8), e0273858.