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26 protocols using ab133327

1

Western Blot Analysis of Cell Cycle and DNA Repair Proteins

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Total proteins were extracted from transfected or non-transfected cells, loaded (50 μg per lane) on 10% sodium dodecyl sulfate (SDS)-polyacrylamide gels, and transferred onto PVDF membranes (Thermo Fisher Scientific). The membranes were blocked for 2 h at 37°C with 5% nonfat milk in Tris-buffered saline with Tween 20 (TBST) and then incubated overnight at 4°C with the following primary antibodies: CDK1 (ab133327, Abcam, Cambridge, UK), cyclin B1 (ab18250; Abcam), cyclin A2 (18202-1-AP; Proteintech, Wuhan, China), MLH1 (ab92312; Abcam), PMS2 (ab110638; Abcam), MSH2 (ab92473; Abcam), MSH6 (ab92471; Abcam) and GAPDH (T0004; Affinity, Changzhou, China). Then, the membranes were incubated with an HRP-conjugated secondary antibody for 1 h at 37°C and covered with ECL luminescence reagent (Perkin-Elmer Inc., Waltham, MA, USA). GAPDH was used as the internal control.
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2

Protein Extraction and Western Blot Analysis

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Cells were harvested and washed twice with cold PBS, then resuspended and lysed in radioimmunoprecipitation-assay buffer (1% NP40, 0.5% sodium deoxycholate, 0.1% sodium dodecyl sulfate, 10 ng/mL phenylmethylsulfonyl fluoride, 0.03% aprotinin, 1 μM sodium orthovanadate) at 4°C for 30 minutes. Lysates were centrifuged for 10 minutes at 14,000× g and supernatants quantified with a Pierce BCA protein-assay kit (Thermo Fisher Scientific). Protein was separated by 10% sodium dodecyl sulfate polyacrylamide-gel electrophoresis. Samples were transferred to polyvinylidene difluoride membranes (Merck Millipore, Billerica, MA, USA) and incubated overnight at 4°C with the primary antibodies Zwint (1:1,000, AP6686c; Abgent, San Diego, CA, USA), Cdc25C (1:1,000, ab32444; Abcam, Cambridge, UK), cyclin B1 (1:1,000, CST 4138), CDK1 (1:1,000, ab133327; Abcam), PCNA (1:1,000, CST 13110S), and GAPDH (1:1,000, G5262; Sigma-Aldrich, St Louis, MO, USA). After incubation with HRP-coupled anti-mouse IgG antibody (1:2,000, Beyotime, Haimen, China) at 37°C for 2 hours, target proteins on polyvinylidene difluoride membranes were visualized using Clarity Western ECL substrate (Bio-Rad) and captured using a luminescent-image analyzer (FujiFilm, Tokyo, Japan).
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3

Western Blot Analysis of Key Proteins

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The same amounts of protein extracts (25 μg) were isolated by SDS-PAGE, and electroblotted to PVDF membranes. The membranes were blotted with the primary antibodies including RNASEH2A (1:1000, ab83943, Abcam), SP1 (1:2000, ab227383, Abcam), CDK1 (1:10000, ab133327, Abcam), CDK2 (1:3000, ab235941, Abcam), N-cadherin (1:1000, ab245117, Abcam), Snail2 (1:1000, ab180714, Abcam), Vimentin (1:1000, ab45939, Abcam) and GAPDH (1:5000, ab8245, Abcam), and then with the corresponding secondary antibody. Enhanced chemilum inescence (ECL) was applied to detect chemiluminescence signals.
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4

Western Blot Quantification of Proteins

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Total protein was harvested from cells using RIPA lysis buffer (Beyotime, China). Protein samples were separated by sodium dodecyl-sulfate polyacrylamide (SDS-PAGE) gel and transferred to polyvinylidene fluoride (PVDF) membranes. Blots were washed and incubated with antibodies. The protein bands were then visualized with an ECL detection system. The primary and secondary antibodies utilized in this study were listed as follows: anti-GAPDH (60004-1-Ig, Proteintech, USA), anti-HNRNPAB Abcam, USA), anti-CDK1 (ab133327, Abcam, USA), anti-Cyclin B1 (ab32053, Abcam, USA), anti-CDC25A (sc-7389, Santa Cruz, USA), anti-CDC25C (ab32444, Abcam, USA), anti-ER (ab75635, Abcam, USA), anti-HER2 (ab134182, Abcam, USA), HRP-conjugated goat anti-mouse IgG (SA00001-1, Proteintech, USA), and HRP-conjugated goat anti-rabbit IgG (SA00001-2, Proteintech, USA).
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5

Antibody-based Apoptosis and Autophagy Analysis

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Antibodies against CDK1 (ab133327), Cyclin B1 (ab32053) and CDC25C (ab32444), Caspase-3 (ab32351), Bcl2 (ab182858), LC3B (ab192890), SQSTM1/P62 (ab109012), and γH2AX (ab81299) were obtained from Abcam (Cambridge, MA, USA). Antibodies against NEK2 (66632-1-lg), TRIM21(12108-1-AP), α-tubulin (11224-1-AP), GAPDH (60004-1-Ig), Bax (60267-1-Ig), Alexa Fluor 594-conjugated donkey anti-rabbit second antibody (SA00013-4), and Alexa Fluor 488-conjugated donkey anti-mouse second antibody (SA00013-1) were obtained from Proteintech (Wuhan, China). An antibody against NEK2 (sc55601) was got from Santa Cruz Biotechnology, Inc (St Louis, MO, USA). The autophagy activator Rapamycin (RAPA, HY-10,219), Cycloheximide (CHX, HY-12,320), and MG132(HY-13,259) were purchased from MedChemExpress (MCE, USA).
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6

Protein Extraction and Western Blot Analysis

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Total protein was extracted from the tissue samples and cells, and the protein concentrations were quantified using a BCA kit (Yeasen, Shanghai, China). Equivalent proteins were separated by SDS-PAGE and transferred to PVDF membranes (Millipore, Billerica, MA, USA). Then, the membranes were blocked and incubated with primary and secondary antibodies. We used ECL chemiluminescence to detect protein signals. GAPDH was used as the internal reference protein. Antibodies against the following proteins were used: GAPDH (60004-1-Ig, Proteintech), FEN1 (ab133311, Abcam), Cdc25C (ab32444, Abcam), CDK1 (ab133327, Abcam) and Cyclin B1 (ab32053, Abcam).
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7

Inhibiting Cancer Cell Proliferation with OSW-1

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OSW-1 (C47H68O15, purity ≥95%) was purchased from Cayman Chemical Company (Ann Arbor, Michigan, United States), dissolved in dimethyl-sulfoxide DMSO (Sigma-Aldrich, St. Louis, MO, United States) then stored in the dark at − 20°C. OSW-1 was diluted with cell culture medium to the required concentrations, with DMSO concentration <0.1%, to avoid side effects. Dulbecco’s modified Eagle medium (DMEM) and fetal bovine serum (FBS) were purchased from Thermo Fisher Scientific (Gibco, United States). Cell counting Kit-8 (CCK-8), RNase, penicillin/streptomycin, propidium iodide, Annexin V-FITC Apoptosis Detection Kit, RIPA lysate, protease inhibitor, protein phosphatase inhibitor, BCA protein assay kit, and electrochemiluminescence (ECL) kit were purchased from Beyotime Biotechnology Company (Shanghai, China). 740Y-P was purchased from TargetMol (Shanghai, China). Primary antibodies against P21 (ab109520), cyclin B1 (ab32053), CDK1 (ab133327), PARP-1 (ab191217), cleaved-PARP-1 (ab32064), cleaved caspase-3 (ab214430), beta Actin (ab8226), PI3K(ab191606), p-PI3K (ab278545), AKT1 (ab183556), and p-AKT1 (ab81283) were purchased from Abcam (Cambridge, MA, United Kingdom). Primary antibodies against cleaved caspase-9 (#9502) and secondary antibodies (goat anti-mouse IgG and goat anti-rabbit IgG, #98164 and #91196) were purchased from Cell Signaling Technology (Beverly, MA, United States).
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8

Western Blot Analysis of Signaling Proteins

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We collected cells and lysed them in RIPA lysis buffer. Aliquots of protein were then loaded and separated on SDS-PAGE gels and transferred to a polyvinylidene difluoride membrane. After blocking, the membrane was incubated with the appropriate primary antibody, followed by incubation with the corresponding secondary antibody. The primary antibodies and dilution factors were as follows: Rabbit anti-PARN (ab1883331, 1:1000 dilution; Abcam, United States), rabbit anti-CDK1 (ab133327, 1:3000 dilution, Abcam, United States), rabbit anti-PIK3CA (ab40776, 1:1000 dilution, Abcam, United States), rabbit anti-AKT [4685, 1:1000 dilution, Cell Signaling Technology (CST), United States], rabbit anti-CCND1 (2978, 1:1000 dilution, CST, United States), rabbit anti-P-AKT (AF887-sp, 1:500 dilution, R&D Systems, United States), and rabbit anti-GAPDH (AP0063, 1:3000 dilution, Bioworld, United States).
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9

Protein Extraction and Western Blotting

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Total protein was extracted from cells using the radioimmunoprecipitation assay lysis buffer containing phenylmethylsulfonyl fluoride at a final concentration of 1 mmol/L (Beyotime Co, Shanghai, China). Western blotting was performed using antibodies against CDKN1C/p57 (Cell Signaling Technology [CST]; #2557), CDK1 (Abcam; ab133327), CDK2 (CST; #2546), CDK6 (CST; #3136), CCNA2 (CST; #4656), and CCNB1 (CST; #12231), as previously described (Song et al., 2019 (link)). β-Actin (Abcam; ab8226) was used as an endogenous reference.
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10

Protein Expression Analysis by Western Blot

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For cellular experiments, total proteins were extracted using RIPA lysis buffer supplemented with protease inhibitor cocktails. Then, the samples were separated by SDS-PAGE and transferred to polyvinylidene difluoride (PVDF) membranes, as described before. Subsequently, the membranes were blocked with 5% nonfat milk in TBST and immunoblotted with anti-cleaved caspase3 (#9661S, 1:1000, Cell Signaling Technology, Danvers, MA, USA), anti-p21 (ab109199, 1:1000, Abcam), anti-CCNB1 (ab181593, 1:1000, Abcam), anti-CDK1 (ab133327, 1:1000, Abcam), anti-RB (ab181616, 1:1000, Abcam), anti-p-RB (#8516S, 1:1000, Cell Signaling Technology) primary antibodies, and GAPDH (AC033, 1:30000, ABclonal, Wuhan, China) overnight at 4 °C. Then, the PVDF membranes were washed and incubated with HRP-conjugated anti-rabbit IgG secondary antibody (#7076, 1:2000, Cell Signaling Technology) or HRP-conjugated anti-mouse IgG secondary antibody (#7074, 1:2000, Cell Signaling Technology). Protein expression level was detected using an enhanced chemiluminescence (ECL) kit and photographed under the automatic chemiluminescence image analyzer (#5200, Tanon, Shanghai, China). Relative quantification was analyzed based on Image J 1.53v software.
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