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Methyl tert butyl ether (mtbe)

Manufactured by Thermo Fisher Scientific
Sourced in United States, Belgium, France, United Kingdom, Germany

Methyl tert-butyl ether is a colorless, volatile, and flammable organic compound. It is a widely used solvent and reagent in various laboratory applications.

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53 protocols using methyl tert butyl ether (mtbe)

1

Plasma Steroid Extraction and Quantification

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Plasma samples were extracted with methyl tert-butyl ether (MTBE) (Fisher Scientific, Hampton, NH) by combining 100 µL plasma with 4.0 mL MTBE and vortexing for 1 min [45] (link). Samples were incubated at room temperature for 7 min to allow phase separation to occur and then the aqueous phase was frozen. The solvent fraction was decanted, equilibrated 10 min at room temperature and incubated at 55°C until all solvent had volatilized (approximately 2 hour). A second extraction of the remaining aqueous fraction from each plasma sample was performed, using 3.0 mL MTBE, and pooled with the first extract. Dried extracts were resuspended in 250 µL E2 zero calibrator solution from the E2 RIA kit (Coat-A-Count, Siemens, Munich, Germany). Average extraction efficiency was 83%, as determined by RIA values for extracted versus unextracted assay standards included with the RIA kit.
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2

Phytochemical Analysis of Berries

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All reagents and chemicals used in this study were of HPLC grade except for sodium chloride (NaCl) and potassium hydroxide (KOH), which were analytical grade and procured from Beijing Chemical Reagent, Co. (Beijing, China). Methanol, formic acid, methyl tert-butyl ether (MTBE), hexane and ether were purchased from Fisher (Fair, United States). Trifluoroacetic acid (TFA), butylhydroxytoluene (BHT) and standards, such as cyanidin 3,5-O-diglucoside, pelargonidin 3,5-O-diglucoside, quercetin 3-O-glucoside, kaempferol 3-O-rutinoside, kaempferol 3-O-glucoside, kaempferol, and β-carotene were procured from Sigma-Aldrich (St. Louis, MO, United States). Remaining standards, including violaxanthin, antheraxanthin, and zeaxanthin were purchased from CaroteNature (Ostermundigen, Switzerland). HPLC grade deionized water was produced with a Pall Cascada LS Ultra Pure Water system (18.2 MΩ cm, East Hills, NY, United States).
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3

Synthesis of Organic Compounds Using Common Reagents

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Anhydrous dichloromethane (DCM) and tetrahydrofuran (THF) were purchased from Sigma Aldrich. Absolute ethanol was obtained from Decon Laboratories. Diethyl ether (Et2O), methyl tert‐butyl ether (MTBE), and sodium azide were purchased from Fisher Scientific. Triethylamine (NEt3) and methanesulfonyl chloride (MsCl) were obtained from Acros and distilled from CaH2 and P2O5, respectively. Trifluoroacetic acid (TFA) was purchased from Oakwood Products. Pearlman's catalyst (Pd(OH)2/C), 2,2,6,6‐tetramethylpiperidine‐1‐oxyl (TEMPO), phenylacetylene (PA), diphenylacetylene (DPA), dimethyl acetylenedicarboxylate (DMAD), and diethyl acetylenedicarboxylate (DEBD) were purchased from Sigma Aldrich and used as received. Potassium bromide and di‐tert‐butyl dicarbonate ((Boc)2O) were purchased from Acros and used as received.
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4

Quantification of Vitamin D Metabolites

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25-OHD3-S, 25-OHD3-G and d6-25-OHD3 were purchased from Toronto Research Chemicals (Toronto, Canada). The purity of d6-25-OHD3, used to prepare the deuterated internal standards, was 96.6%. Iodobenzene I,I-diacetate, 3’-phosphoadenosine-5’-phosphosulfate (PAPS), uridine 5’-diphosphoglucuronic acid ammonium salt (UDPGA), alamethacin and 4-phenyl-1,2,4-triazoline-3,5-dione (PTAD) was purchased from Sigma-Aldrich (St. Louis, MO, USA).
4-(4’-dimethylaminophenyl)-1,2,4-triazolidine-3,5-dione (precursor of DAPTAD) was purchased from Santa Cruz Biotechnology (Dallas, TX, USA). HPLC-grade acetonitrile, methanol, ethyl acetate, methyl tert-butyl ether, formic acid, acetic acid, and ammonium hydroxide were obtained from Fisher Chemicals (Waltham, MA, USA). Vitamin D3-free human serum was purchased from Golden West Biologicals (Temecula, CA, USA). Human plasma was obtained from the Puget Sound Blood Bank (Seattle, WA). Pooled human liver cytosol and microsomes were prepared in-house using liver tissue provided by the University of Washington School of Pharmacy Human Tissue Bank.
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5

Quantitative Analysis of Bioactive Compounds

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SOR (purity 99.8%, Lot ZZS-20-638-G3), Sorafenib-d3 (purity 99.5%, Lot ZZS-20-X261-A1), and 2H4-Canagliflozin (purity 98%, Lot 21J167-D1) were purchased from Shanghai Zhen Zhun Biotechnology Co., Ltd. (Shanghai, China). DAPA (purity ≥99%, Lot K1704045) was obtained from Shanghai Aladdin (Shanghai, China). Biochemical Technology Co., Ltd. (Shanghai, China). Dimethyl sulfoxide (DMSO) was acquired from Beijing Solarbio Science Technology Co. Ltd. (Beijing, China). High-performance liquid chromatography (HPLC)-grade acetonitrile, methyl tertbutyl ether, formic acid, and ammonium acetate was supplied by Fisher Scientific (Pittsburgh, PA, USA). Ultrapure water was used throughout the study and purchased from Wahaha Group Co., Ltd. (Hangzhou, China). The TRNzol Universal Reagent, FastQuant RT Kit (with DNase), and SuperReal PreMix Plus (SYBR Green) were purchased from Tiangen Biotech Co., Ltd. (Beijing, China).
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6

Synthesis and Characterization of DMPC Lipopeptides

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1, 2-Dimyristoyl-sn-glycero-3-phosphocholine (DMPC) pre-dissolved in chloroform was obtained from Avanti Polar Lipids (Alabaster, AL). Fmoc-Arg (Pbf)-Nova Syn TGA resin (0.23 mmol/g), 9-Fluorenylmethyl-oxycarbonyl-O-succinimide (Fmoc-OSu) and all amino acids were purchased from Novabiochem, San Diego, CA. Triisopropylsilane (TIS), anisole, hexafluro-2-propanol (HFIP), 30% ammonium hydroxide [NH3 (aq.)], piperidine were purchased from Sigma-Aldrich, St. Louis, MO. 2,2,6,6-Tetramethylpiperidine-1-oxyl-4-carboxylic acid (TOAC) was purchased from Acros Organics, Belgium. Trifluoroacetic acid (TFA), 1-hydroxybenzo-triazole (HOBt), (2-(7-Aza-1H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (HATU), diisopropylethylamine (DIEA), M-methyl-pyrrolidone (NMP), and dichloromethane (DCM) were purchased from Applied Biosystems, Foster City, CA. Acetic anhydride (Ac2O) and methyl-tert-butyl ether were purchased from Fisher Scientific, Pittsburgh, PA.
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7

Cardiolipin Lipid Oxidation Analysis

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Methyl-tert-butyl ether (Fisher Scientific, Fair Lawn, NJ), Methanol (Burdick and Jackson, Muskegon, MI), Millipore deionized water (Milli-Q Advantage A10, EMD Millipore, Billerica, MA), Isopropanol (Burdick and Jackson, Muskegon, MI), Lithium hydroxide (Sigma-Aldrich, St. Louis, MO). 1,1’,2,2’-Tetramyristoyl cardiolipin (T14:0 CL) (Avanti Polar Lipids, Inc., Alabaster, AL), (±)−4-hydroxy-9,9,9-d3-non-2E-enal (d3-4-HNE) (Cayman Chemical, Ann Arbor, MI). All other chemicals used in this study were from Sigma–Aldrich (St. Louis, MO) except for those specifically indicated.
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8

Quantification of MPA and Progesterone

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MPA and progesterone were measured by Wisconsin National Primate Center Assay Services. Briefly, plasma, standards and quality control samples were diluted in 500 μL of ultrapurified water (Fisher Scientific). Methyl tert butyl ether (Fisher Scientific) was then added, vortexed vigorously, and incubated at room temperature for 5 min. The organic phase containing steroids was transferred into a new tube, evaporated to dryness by air stream and heated water bath (60 °C), and then resuspended in 50 μL of 20% acetonitrile in water and analyzed via LC-MS/MS. The calibration curve ranged from 0.195 to 25 ng/mL and the linearity was r > 0.9990. The intraassay CV was 2.76% and the interassay CV was 4.7%.
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9

Quantifying Plasma Progesterone via LC-MS/MS

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Plasma progesterone was measured by Wisconsin National Primate Center Assay Services. Briefly, plasma, standards and quality control samples were diluted in 500 μL of ultrapurified water (Fisher Scientific, Waltham, MA, USA). Methyl tert butyl ether (Fisher Scientific) was then added, vortexed vigorously, and incubated at room temperature for 5 min. The organic phase containing steroids was transferred into a new tube, evaporated to dryness using an air stream and heated water bath (60 °C), and then resuspended in 50 μL of 20% acetonitrile in water and analyzed using LC-MS/MS. The calibration curve ranged from 0.195 to 25 ng/mL and the linearity was r > 0.9990. The intraassay CV was 4.24% and the interassay CV was 6.47%.
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10

Characterization of Steroid Metabolism

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Progesterone, 6β-OHP, and 16α-OHP were obtained from Steraloids, Inc. (Newport, RI). 6β-hydroxytestosterone, β-nicotinamide adenine dinucleotide phosphate tetrasodium salt (NADPH), and ketoconazole were purchased from Sigma-Aldrich, Co. (St. Louis, MO). Letrozole, α-naphthoflavone, omeprazole, pilocarpine, quecertin, quinidine, and sulfaphenazole were obtained from Sigma-Aldrich, Santa Cruz Biotechnology (Dallas, TX), or Cayman Chemical (Ann Arbor, MI). Pooled human liver microsomes (HLMs) from 150 individual donors and baculovirus–expressed CYP3A4+b5, CYP3A5+b5 and CYP3A7+b5, CYP2A6, CYP19A1 were purchased from Corning Gentest (Woburn, MA). Acetonitrile (ACN) and methyltert-butyl ether were obtained from Fisher Scientific (Fair Lawn, NJ). All other chemicals were of high performance liquid chromatography (HPLC) grade and purchased from reputable manufacturers.
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