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Cell lytic

Manufactured by Merck Group
Sourced in United States

Cell Lytic is a reagent designed for the efficient lysis of cells to extract cellular components, such as proteins and nucleic acids. It is a proprietary formulation that disrupts the cell membrane, allowing for the release of intracellular contents without compromising the integrity of the target molecules.

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17 protocols using cell lytic

1

Quantification of FGF21 and Metabolic Markers

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These tissues were homogenized in CellLytic (Sigma‐Aldrich Corp., Tokyo, Japan). Supernatant was collected after centrifugation. Protein concentrations were quantified using a bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific Inc., MA). Concentration of FGF21 in the serum and the tissues was measured using a mouse FGF21 immunoassay kit (R&D Systems, MN).
Plasma glucose concentration was measured using the glucose dehydrogenase method (glutest PRO R; Sanwa Kagaku Kenkyusho Co. Ltd., Aichi, Japan). Plasma insulin, glycerol, NEFA, and 3‐HB concentrations were measured using insulin ELISA kit (Mercodia AB, Uppsala, Sweden), glycerol assay kit (Cayman Chemical, Ann Arbor, MI), NEFA‐C kit (Wako Pure Chemical Industries Ltd., Osaka, Japan), and 3‐HB kit (Sanwa Kagaku Kenkyusho Co., Ltd., Aichi, Japan).
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2

Western Blot Analysis of Tumor Samples

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Tumor tissues were lysed in T-PER (#78510, ThermoScientific, Waltham, MA, RRID:SCR_008452) or Cell-Lytic (#C-3228, Sigma-Aldrich, St. Louis, MO, RRID:SCR_008988) lysis buffers. Protein concentrations were established using the Pierce BCA Protein Assay Kit (#23225, Thermo Scientific, Waltham, MA, RRID:SCR_008452). Western blotting was performed using standard procedures, and blots developed using Luminata Western horseradish peroxidase (HRP) (Classico, WBLUC0500, Crescendo, WBLUR0500, and Forte, WBLUF0500, EMD Millipore, Burlington, MA, RRID:SCR_008983) and Immun-Star AP substrate (#1705018, Bio-Rad Laboratories, Hercules, CA, RRID:SCR_008426). Antibodies used are listed in Suppl Table S1. Quantification was done using NIH ImageJ Imaging Software (National Institutes of Health, Bethesda, MD, RRID:SCR_003070), and all values normalized to total Ponceau S (sc-301558, ChemCruz, Dallas, TX, RRID:SCR_008987) staining for each lane.
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3

Fluorescent Lysyl Oxidase Activity Assay

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LOX activity was measured by a fluorescent assay modified from the report of Palamakumbura and Trackman [21 (link)]. Briefly, 25mg of whole aorta tissue was homogenized in 300μL of Cell lytic (Sigma) at -80°C and reconstituted to 1mL with LOX buffer (1.2 mol/L urea, 50mmol/L sodium borate [pH = 8.2]) then centrifuged at 12,000 g for 10 minutes. Supernatant was then used for LOX enzymatic activity through the production of H2O2 and detected with fluorescent resorufin at wavelength 563 and 587nm. BAPN was used in one set of paired samples to establish that the production of H2O2 was a specific product of lysyl oxidase enzymatic activity.
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4

Multiplex Analysis of Akt Signaling

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For multiplex analysis, the Bio-Plex Pro Cell Signaling Akt Panel 8-Plex Assay kit (cat #LQ00006JK0K0RR, Bio-Rad Laboratories, Hercules, CA, RRID:SCR_008426) was used. Tissue samples were lysed using Cell-Lytic (#C-3228, Sigma-Aldrich, St. Louis, MO, RRID:SCR_008988) lysis buffer. Protein concentrations were established using the Pierce BCA Protein Assay Kit ((#23225, Thermo Scientific, Waltham, MA) and loaded in a 96-well plate containing magnetic beads for overnight incubation according to the manufacturer’s protocols. The following day, protein signal was assessed using Bio-Plex 200 system (Bio-Rad Laboratories, Hercules, CA, RRID:SCR_008426). Results were processed using GraphPad Prism 6 (GraphPad Software, San Diego, CA, RRID:SCR_002798) software.
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5

Protein Extraction from Cells and Explants

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Protein isolation from cells was conducted using Cell Lytic (Sigma-Aldrich, St. Louis, MO, USA) with cOmplete™, Mini Protease Inhibitor Cocktail (Sigma-Aldrich, St. Louis, MO, USA) according to the manufacturer’s instructions. Protein isolation from explants was carried out using T-PER™ Tissue Protein Extraction Reagent (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. Isolated protein from cells and placental explants was quantified using BCA Assay concentrate (Bio-Rad Laboratories, Foster City, CA, USA) with BSA as standard.
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6

Western Blot Analysis of Rat SCG Neurons

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Total protein from cultures of rat SCG neurons was extracted using Cell Lytic (Sigma-Aldrich) and sample buffer from neurons plated on plastic 35-mm dishes coated with 1 mg/ml PDL. The Bio-Rad Mini-PROTEAN Tetra Cell system (Hercules, CA) was used for electrophoretic separation of the protein samples according to the manufacturer's instructions. Protein samples were resolved using 7.5% SDS–PAGE. The gel was transferred onto nitrocellulose membranes (Bio-Rad). The blots were blocked with 5% milk in Tris-buffered saline with Tween 20 (TBST; Bio-Rad), and then probed with primary antibodies at +4°C overnight. After being washed, the blots were incubated with peroxidase-conjugated secondary immunoglobulin G (Jackson Immunoresearch). Membrane-bound peroxidase was visualized on Pierce CL-XPosure Film after treatment with ECL Western Blotting Substrate (Thermo Scientific, Waltham, MA). Levels of protein of interest were normalized with GAPDH for each group and expressed as densitometric ratios against the control lane using ImageJ (Bethesda, MD).
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7

Protein Extraction and Western Blotting

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Total protein was harvested from asynchronously proliferating cells in lysis buffer (CellLytic, Sigma-Aldrich) supplemented with ULTA protease inhibitors and PhosSTOP phosphatase inhibitors (Roche Diagnostics, UK). Lysates were sonicated, the supernatant was collected, and protein concentrations were quantified with a BCA Protein Assay kit (Pierce, Rockford, IL, USA). Cell lysates were resolved on 10% SDS-PAGE gels and transferred to 0.2 μm PVDF membranes by western blotting. The membranes were blocked with 5% nonfat dry milk at room temperature for 1 h and then incubated overnight with the following specific primary antibodies: anti-caspase 3 (#9662), anti-PARP (#9542), anti-Survivin (#2803), anti-nucleophosmin (#3542), anti-nucleophosmin phospho-Thr199 (#3541), anti-GAPDH (#2118), and anti-β-actin (#5125) were from Cell Signaling Technology; anti-retinoblastoma phospho-Ser807/801 (#sc-819), anti-MCL-1 (#sc-819), anti-p53 (#sc-126), and anti-Cdc2 (#sc-54) were from Santa Cruz Biotechnology; and anti-RNA polymerase II CTD repeat YSPTSPS Phospho-Ser2 (ab70324) was from Abcam.
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8

Preparation of hWJSC-Derived Cell Products

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The hWJSC extracts, namely, the hWJSC-conditioned medium (hWJSC-CM) and the hWJSC-lysate (hWJSC-L), were prepared according to an earlier published protocol (Gauthaman et al., 2012 (link)). Briefly, the hWJSC-CM was prepared from the early passages (P3–P4) of the hWJSCs (70–80% confluence) cultured in the hWJSCs medium for 48 h under standard culture conditions of 37°C and air atmosphere of 5% CO2. The medium was separated, filtered through a 0.22 mm Millex-GP syringe filter (Millipore, MA, United States), and stored at −20°C until use in experiments. The hWJSC-L was prepared by lysing the pelleted hWJSCs using 100 μl commercial mammalian cell lysis buffer (Cell Lytic, Sigma, MO, United States) and incubation on ice for 45 min. The lysate was centrifuged (15,000 rpm, 15 min), and aliquots of the supernatant were stored at −80°C until use in experiments. The total protein content of the hWJSC-L was measured using a NanodropTM spectrophotometer (Nanodrop Technologies, DW, United States).
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9

Immunoblotting Procedure for Protein Detection

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A total of 1–3 × 104 cells were lysed using CellLytic (Sigma-Aldrich). We used an iBlot kit (Invitrogen) to perform immunoblotting. The antibodies used to detect proteins were as follows: Anti-SLAMF8 antibody (rabbit polyclonal, PAB8582; Abnova, Heidelberg, Germany), anti-phospho-ALK (Tyr 1096) (rabbit polyclonal, #4143; Cell Signaling Technology, Beverly, MA, USA) and anti-GAPDH antibody (rabbit monoclonal [D16H11], #5174; Cell Signaling Technology). The blotting images were scanned using a Light-Capture II (ATTO) (Figs. 1 suppl and 2 suppl). To quantify the band’s intensities, the scanned data were analyzed using the CS Analyzer (ATTO).
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10

Collagenase-based Cell Extraction Protocol

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Collagenase was obtained from Worthington Biochemical Corporation (Labclinics, Madrid, Spain). Cell Lytic for cell lysis and protein solubilization, crystal violet, protease inhibitor cocktail (Complete, EDTA-free), thapsigargin and Tween-20 were purchased from Sigma Chemicals Co. (Madrid, Spain). Fetal bovine serum, Hank’s balanced salts (HBSS), horse serum, medium 199 and SuperSignal West Femto were obtained from Fisher Scientific Inc. (Madrid, Spain). Polystyrene plates for cell culture were obtained from Thermo Fisher Sci. (Madrid, Spain). Penicillin/streptomycin was purchased from BioWhittaker (Lonza, Basel, Switzerland). Acrylamide, Bradford´s reagent, Tris/glycine/SDS buffer (10×) and Tris/glycine buffer (10×) were from Bio-Rad (Madrid, Spain). 5-Bromo-2-deoxyuridine (BrdU) cell proliferation assay kit was purchased from BioVision (Deltaclon S.L., Madrid, Spain). SB203580 and U0126 were obtained from Tocris (Biogen Científica, Madrid, Spain). Species-specific HRP-conjugated secondary antibodies were purchased from Thermo Fisher Sci. (Madrid, Spain). All other analytical-grade chemicals used were obtained from Sigma Chemicals Co. (Madrid, Spain).
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