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2 protocols using diphenyleneiodonium

1

Zebrafish Hindbrain Infection Assay

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Zebrafish at the prim25 stage (at approximately 36 hours post fertilization; staged according to the method of Kimmel, et al. (Kimmel et al., 1995 (link))), were manually dechorionated, and anesthetized in Tris-buffered tricaine methane sulfonate (Tricaine; 200 mg/ml; Western Chemicals, Inc., Frendale, WA) prior to injection. For injections, approximately 5 nL of opsonized polystyrene bead suspension at 1.5 × 107 beads/ml in PVP, or 2 nL of C. albicans suspension at 1.0 × 107 cfu/ml was microinjected through the otic vesicle into the hindbrain ventricle to achieve a dose of approximately 15 beads or 15 fungal cells at the site of injection. Within one hour post-injection, larvae were screened using a Zeiss Axiobserver Z1 microscope equipped with Vivatome system (Carl Zeiss Microimaging, Thornwood, NJ) for selection of larvae containing 13–17 beads/fungal cells at the site of injection (SOI). Larvae were subsequently incubated at 33°C in E3 media containing PTU. In experiments to test the relationship between extracellular fungal number and mortality, larvae were preincubated for 1 hour pre-infection with either DMSO or diphenyleneiodonium (Enzo, Farmingdale NY) as described (Brothers et al., 2013 ).
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2

Optimizing Biochemical Assays with Reagents

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N-ethylmaleimide (NEM), iodoacetic acid (IAA), trichloroacetic acid (TCA), catalase, and phenylarsine oxide (PAO) were purchased from Sigma-Aldrich (St. Louis, MO, USA), and diphenylene iodonium (DPI) was obtained from Enzo Life Science (Farmingdale, NY, USA). EZ-Link-Maleimide-PEG2-Biotin and NeutrAvidin UltraLink Resin were obtained from Pierce (Waltham, MA, USA). Epidermal growth factor (EGF) was obtained from Invitrogen, and 4-6-diamidino-2-phenylindole (DAPI) was obtained from Roche (Basel, Switzerland). Chlorpromazine and Dynasore were purchased from Sigma-Aldrich (St. Louis, MO, USA). All antibodies were used in dilutions indicated or otherwise recommended by the manufacturers. Antibodies specific to Synj2 (1:500, ab75880, Abcam), c-Myc (1:1000, SC40, Santa Cruz Biotechnology), β-Actin (1:1000, A2228, Sigma Aldrich), α-Tubulin (1:1000, T9026, Sigma Aldrich), catalase for IF (final concentration 5 μg/ml, 12C2DB9, Abcam; Cambridge, United Kingdom), catalase for IB (1:2000, LF-PA0060, AbFrontier; Seoul, South Korea), and EGFR (1:1000, 2232, Cell Signaling Technology, Danvers, MA, USA) were obtained from commercial sources.
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