The largest database of trusted experimental protocols

3 protocols using sc 59987

1

Extraction and Analysis of Plasma Membrane Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 24 h, transfected cells were washed once with ice-cold PBS 1× and after dislodged by scraping using Buffer NP40 (50 mM Tris-HCl pH7,5; 150 mM NaCl; 1% Nonidet P 40 substitute). Cells were lysed for 30 min at 4 °C on a rotator and the lysates were cleared by centrifugation (17,949 × g for 30 min at 4 °C).
Plasma membrane proteins were extracted using the Plasma Membrane Protein Extraction Kit from Abcam. Proteins from membrane and cytoplasmic extracts were western blotted with antibodies against PKP2 (EB10841, Everest Biotech, 1:1000), N-cadherin (sc-59987, Santa Cruz Biotechnology, 1:1000), and GAPDH (sc-32233, Santa Cruz Biotechnology, 1:1000). Secondary antibodies were anti-goat (ABIN2169607, Antibodies online, 1:4000) and anti-mouse (ABIN6699027, Antibodies online, 1:4000) as appropriate. Immunoblots were developed in an iBright 1500 system.
+ Open protocol
+ Expand
2

Antibody-based Analysis of Histone Modifications

Check if the same lab product or an alternative is used in the 5 most similar protocols
An antibody against NNMT (sc‐376048; Santa Cruz Biotechnology) was used for immunoblotting (1:100) and immunohistochemistry (1:100). Antibodies for immunoblotting against ERK1/2 (1:1000; no. 4695), phospho‐ERK1/2 (Thr202/Tyr204) (1:2000; no. 4370), H3K4me3 (1:1000; no. 9751), and H3K27me3 (1:1000; no. 9733) were purchased from Cell Signaling Technology. Antibodies against neural cadherin (N‐cadherin) (1:200; sc‐59987; Santa Cruz Biotechnology) and H3K9me2 (1:500; ab1220; Abcam) were used for immunoblotting. An antibody against Cleaved Caspase‐3 (no. 9661; Cell Signaling Technology) was used for immunohistochemical analyses (1:400). Antibodies against β‐actin (1:1000; no. 5125) and Histone H3 (1:1,000; no. 4499), used as loading controls for immunoblotting, were obtained from Cell Signaling Technology.
+ Open protocol
+ Expand
3

Immunofluorescence Analysis of hCECs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The hCECs were cultured in a slide chamber and treated with ROCK inhibitors and incubated for 24 h. After removing the media, they were washed with phosphate-buffered saline (PBS), and fixed for 20 min in 3.7% (v/v) formaldehyde solution. Cells were permeabilized for 10 min with 0.5% (v/v) Triton X-100 and blocked for 1 h with 1% (w/v) bovine serum albumin (BSA) at room temperature. After washing with PBS, the cells were incubated overnight with either rabbit anti-Ki67 antibody (sc-23900, Santa Cruz, CA, USA), ZO-1 (sc-10804), β-catenin (ab32572), integrin β1 (sc-18887), SOX2 (sc-365823), N-cadherin (sc-59987), or E-cadherin (sc-8426) at 4 °C, and then washed with PBS. Cells are incubated with fluorescein isothiocyanate-conjugated goat anti-rabbit IgG antibody (1:100) or anti-mouse IgG antibody for 1 h at 37 °C in the dark. Cells were counterstained with Hoechst33342 nuclear staining dye. After extensive washing with PBS, the slides were mounted in a drop of mounting medium to reduce photobleaching. Negative control staining was conducted in parallel with the omission of the primary antibodies.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!