The largest database of trusted experimental protocols

2 protocols using mycbp

1

Profiling miRNA and Telomerase in Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
miRNA was extracted from SKG-II cells and C4-1 cells using the miRNA isolation kit (Ambion) according to the manufacturer’s protocol, and cDNA was synthesized using SuperScript II reverse transcriptase kit (Invitrogen). PCR was carried out using the Platinum PCR SuperMix (Invitrogen) system according to the manufacturer’s protocol. The following primers were used for PCR: miR-22 (Assay ID: 000398; Applied Biosystems, Carlsbad, CA, USA), hTERT (Hs00972650; Applied Biosystems), MYCBP (Hs00429315; Applied Biosystems). The expression of miR-16 and GADPH was assessed as an internal control in reactions.
+ Open protocol
+ Expand
2

Quantifying miRNA and mRNA Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was purified with miR-Neasy Mini Kit (Qiagen, Valencia, CA, USA), cDNA was transcribed from 10ng RNA using TaqMan® miRNA Reverse Transcription Kit (Applied Biosystems, Foster City, CA, USA). Real-time PCR was performed using TaqMan® miRNA assays (Applied Biosystems, Foster City, CA, USA) for miR-22 (#000398) according to the manufacturer's instructions. Expression of U6 (#001973) was used as a reference. For quantification of expression of pri-miR-22 or various mRNAs, RNA extraction was performed with the RNeasy Mini Kit (Qiagen, Valencia, CA, USA). cDNA was subsequently transcribed using the High Capacity cDNA Reverse Transcription Kit followed by PCR analysis using TaqMan® Gene Expression Assays: pri-miR-22 (#Hs03302632_pri), NCOA1 (#Hs00186661), CDK6 (Hs 01026371_m1), HDAC4 (Hs 01041638_m1), HDAC6 (Hs 00195869_m1), MAX (Hs 00811069_g1), MYCBP (Hs 00429315_g1), PTEN (Hs 02621230_s1) (all from Applied Biosystems, Foster City, CA, USA) according to the manufacturer's instructions. GAPDH (#Hs02758991_g1) was included as a reference. The amplification was performed on an Mx3005P qPCR System (Agilent Technologies, Santa Clara, CA, USA) real-time cycler on standard settings.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!