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3 protocols using anti epcam antibody

1

Multimarker Immunofluorescence Analysis

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5µm sections of formalin fixed paraffin embedded tissue were deparaffinized and washed in gradient ethanol 100%, 90%, 70% and water. After antigen retrieval (boiling at 95°C for 20 minutes) in Dako modified citrate-based buffer (Dako, S1700), sections were blocked with 3% BSA in PBS-Triton (0.03% v/v) overnight, and then incubated with anti-EpCAM antibody (Santa Cruz Biotechnology, Cat# sc53532), anti-iNOS antibody (Abcam, Cat#: ab15323), F4/80 antibody (Abcam, Cat# ab6640), anti-nitrotyrosine antibody (Millipore, Cat#: 05-233), anti-Ki67 antibody (BD Pharmingen, Cat#: 550809), anti-γH2AX antibody (Cell signaling, Cat#: 9718), anti-Phospho-STAT3 (Tyr705) (Cell Signaling, Cat#: 9145), and anti-MPO antibody (Abcam cat#: ab45977) at room temperature for one hour. Primary antibodies were visualized with Alexa-Fluor-568 conjugated or Alexa-Fluor-488 conjugated secondary antibodies (goat-anti-rabbit, goat-anti-rat, or goat-anti-mouse, Invitrogen). Tissue sections were counter-stained with DAPI. All the stained slides were examined under a Zeiss Axioskop 2 plus microscope with QIClick digital CCD Camera (QImaging). Morphometric analysis from at least 8 random images was performed using Image Pro-Plus (version 7.2, Media Cybematics, Silver Spring, MD, USA). All images were acquired using a 20X or 100X objective lens.
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2

Multimarker Immunofluorescence Analysis

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5µm sections of formalin fixed paraffin embedded tissue were deparaffinized and washed in gradient ethanol 100%, 90%, 70% and water. After antigen retrieval (boiling at 95°C for 20 minutes) in Dako modified citrate-based buffer (Dako, S1700), sections were blocked with 3% BSA in PBS-Triton (0.03% v/v) overnight, and then incubated with anti-EpCAM antibody (Santa Cruz Biotechnology, Cat# sc53532), anti-iNOS antibody (Abcam, Cat#: ab15323), F4/80 antibody (Abcam, Cat# ab6640), anti-nitrotyrosine antibody (Millipore, Cat#: 05-233), anti-Ki67 antibody (BD Pharmingen, Cat#: 550809), anti-γH2AX antibody (Cell signaling, Cat#: 9718), anti-Phospho-STAT3 (Tyr705) (Cell Signaling, Cat#: 9145), and anti-MPO antibody (Abcam cat#: ab45977) at room temperature for one hour. Primary antibodies were visualized with Alexa-Fluor-568 conjugated or Alexa-Fluor-488 conjugated secondary antibodies (goat-anti-rabbit, goat-anti-rat, or goat-anti-mouse, Invitrogen). Tissue sections were counter-stained with DAPI. All the stained slides were examined under a Zeiss Axioskop 2 plus microscope with QIClick digital CCD Camera (QImaging). Morphometric analysis from at least 8 random images was performed using Image Pro-Plus (version 7.2, Media Cybematics, Silver Spring, MD, USA). All images were acquired using a 20X or 100X objective lens.
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3

Molecular Mechanisms of Stem Cell Regulation

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Hepatocyte growth factor (HGF) and transforming growth factor β 1 (TGF-β-1) were purchased from Pepro Tech (Rocky Hill, USA). Rapamycin and AICAR were purchased from Calbiochem (San Diego, CA, USA). The anti-CD90 conjugated PE antibody was purchased from eBioscience (San Diego, CA, USA). The anti-EpCAM antibody was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The anti-mTOR and anti-CD90 antibodies were purchased from Epitomics (Burlingame, CA, USA). The anti-CD133 and anti-CD44 antibodies were purchased from Abcam (Cambridge, UK). The anti-phospho-mTOR, anti-phosphor-AMPK, anti-AMPK, anti-mTOR, secondary horse anti-mouse horseradish peroxidase-conjugated and anti-rabbit horseradish peroxidase-conjugated antibodies were purchased from Cell Signaling (Beverly, MA, USA). The anti-β-actin antibody was purchased from Chemicon (Pittsburgh, PA, USA). The AC133 antibody was purchased from Miltenyi Biotec (Bergisch Gladbach, Germany).
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