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Bradford reagent

Manufactured by Thermo Fisher Scientific
Sourced in United States, Germany

The Bradford reagent is a colorimetric assay used for the quantitative determination of total protein concentration in a sample. It involves the binding of Coomassie Brilliant Blue G-250 dye to proteins, resulting in a color change that can be measured spectrophotometrically.

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107 protocols using bradford reagent

1

Quantification of Cellular Protein Levels

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For the Western immunoblot analysis, the protein concentrations were determined after centrifugation using a Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA), following the manufacturer’s instructions. For the ELISA analysis and pseudovirus entry assays, the protein concentrations were determined using the Bradford assay as follows. For 96-well plates, 100 mL 5 mg/mL of NaOH was added to each well to lyse the cells, and 20 mL cell lysates were added to a new 96-well plate, followed by 200 mL of Bradford Reagent (Alfa Aesar, Haverhill, MA, USA). The mixture was incubated at RT for 2 min, and the absorbance at 595 nm was measured using a multimode plate reader (Perkin Elmer VICTOR X5, Waltham, MA, USA).
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2

Carrageenan and Furcellaran Extraction Protocols

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κ-carrageenan (C1804), ι-carrageenan (C1805), and λ-carrageenan (C3313) were purchased from Tokyo Chemical Industry Co., Ltd., Tokyo, Japan. Furcellaran (Estgel 1000) was kindly provided by Est-Agar AS, Saaremaa, Estonia. Growth media components of different origins were used: agar (MC002) was purchased from Neogen Food Safety, sea salt (Instant Ocean; 97-2433) from Aquarium Systems, tryptone (BP9726-2) from Fisher Scientific, and yeast extract (Y0875) from Sigma-Aldrich.
The chemicals used for the determination of enzyme activity were as follows: Tris(hydroxymethyl)aminomethane (252859), Potassium hexacyanoferrate(III) (244023), Na2CO3 (4154566), and NaOH (415413) from Sigma-Aldrich. Bradford reagent (J61522) was purchased from Alfa Aesar. All the other necessary chemicals and reagents were supplied by Sigma-Aldrich.
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3

Bradford Assay for Aggregative Cultures

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Due to the highly aggregative properties of SCVs, OD600 measurements were not appropriate to evaluate the growth of standing cultures. The Bradford protein assay was used to quantify the total proteins concentration in all our samples. Pellets from 1 mL of culture were resuspended in 1 mL of 0.1 N NaOH and incubated 1 h at 70°C, and then protein concentrations were measured in samples according to the manufacturer guidelines for the Bradford reagent (Alfa Aesar).
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4

Molecular Profiling of U87 Glioma Cells

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0.75 x 106 U87 cells were plated in 100 mm plates with 10 mL media and kept overnight. The following day cells were treated with STP, TMZ, their combination or etoposide as positive control for 48 hr. Cells were then lysed with modified radioimmunoprecipitation assay buffer (RIPA) and protease phosphatase inhibitor cocktail. Lysates were normalized using Bradford reagent (Alfa Aesar) and 4X SDS dye was added. Proteins were separated on 4-20% SDS PAGE gradient gel (Bio-Rad) and then were transferred on polyvinylidene difluoride membrane (Millipore Sigma). Membranes were blocked with 5% milk for 1 hr. Primary antibodies β actin (Proteintech #66009-1-Ig) and survivin (Cell signaling, 2803) were added and kept on 4 °C overnight on a shaker. The following day TBST washes were given, and secondary anti-mouse and anti-rabbit antibody was added in 1% milk for 1 hr at room temperature. Membranes were washed again with TBST prior to imaging. Imaging was done using Azure Imaging system.
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5

Total Protein Content in A. stephensi

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To measure total protein content of adult female A. stephensi derived from control or ABA-treated larvae, 2 mosquitoes within 8 h of eclosion were homogenized in 10 mM dithiothreitol with 1 mM protease inhibitor cocktail (Sigma) in 100 μL loading buffer (Bio-Rad). Samples were boiled for 5 min and then centrifuged at 10,000 × g for 10 min at 4°C. Supernatants were transferred to new tubes and stored at −80°C. Total protein content was determined using Bradford reagent (Alfa Aesar) using bovine albumin serum (BSA) as a standard. Three separate cohorts of mosquitoes were used to complete biological replicates of these studies, each with three technical replicates.
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6

Tissue Lysis and Protein Extraction Protocol

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After harvest, mouse tissues were snap-frozen in liquid nitrogen, and stored at −80 °C before lysis. Tissues were homogenized in a lysis buffer (50 mM Tris-HCl (pH 7.4), 1 mM EDTA, 1 mM EGTA, 1% (v/v) Triton X-100, 1 mM sodium ortho-vanadate, 10 mM sodium glycerophosphate, 50 mM sodium fluoride 5 mM sodium pyrophosphate, 0.27 M sucrose, 2 µM microcystin-LR, 1 mM benzamidine, 0.1% (v/v) 2-mercaptoethanol, 0.2 mM phenylmethanesulfonyl fluoride, 1 mg/ml leupeptin, 1 mg/ml pepstatin and 1 mg/ml aprotinin). Tissue homogenates were lysed on ice for 30 min, and tissue debris was removed through centrifuge to obtain tissue lysates. Measurements of protein concentrations were carried out using Bradford reagent (Thermo Fisher Scientific).
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7

Nuclear Extraction and Western Blot Analysis

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CD4+ T cells were lysated and proteins were extracted using a nuclear extraction reagent (Boster Biological Technology, Pleasanton, CA, USA). Proteins were quantified by the Bradford reagent (Thermo Fisher Scientific, Waltham, MA, USA), followed by 12% vertical dodecyl sulfate-polyacrylamide gel electrophoresis. Proteins were then transferred into a polyvinylidene difluoride (PVDF) membrane (Sigma-Aldrich, St. Louis, MO, USA). The PVDF membrane was blocked in 5% skim milk for 1 h at room temperature, then incubated with an antibody against P65 (GB11142, 1:1000, Wuhan Servicebio Technology Co., Ltd., Wuhan, China) or P50 (ab7971, 1:5000, Abcam, Cambridge, MA, USA) for 12-16 h at 4℃ , and followed by incubating with a mouse anti-rabbit IgG antibody (H&L) (GenScript, Piscataway, NJ, USA). Proteins were detected with an enhanced chemiluminescence (ECL) western blot detection kit (Thermo Fisher Scientific, Waltham, MA, USA). Quantification of P65 and P50 was normalized to GAPDH by densitometry.
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8

Monitoring Protein Markers During Cellular Differentiation

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Protein lysates were prepared in a RIPA lysis buffer using ice and a 27 G needle with the addition of protease (Roche, 11836170001, Indianapolis, IN, USA) and phosphatase (Roche 4906837001) inhibitors. Quantification was performed using a detergent-compatible Bradford reagent (Thermo Scientific, 1863028, Waltham, MA, USA). The proteins were loaded into a 12% stain-free gel, and blocking was performed using 3% low-fat milk for 2 h. The membrane was incubated overnight at +4 °C with the following antibodies: anti-PINK1 (Abcam, ab23707, Waltham, MA, USA) 1:1000, anti-LC3 (Cell Signalling, #3868) 1:1000, anti-FUNDC1 (Novus Biologicals, NBP1-81063, Centennial, CO, USA) 1:2500, and anti-p62 1:15,000 (Abcam, ab109012). The membranes were then washed 3 times in TBST and incubated with secondary antibodies (1: 200,000) for 1 h. Subsequent detections were accomplished using the Femto SuperSignal chemiluminescent reagent (Thermo Scientific, 34095). Because of the low protein yield on D1, Western blot was only performed on D7 and D14 of differentiation. The results obtained with the Western blot were normalized to the total protein amount. All images of the Western blots can be found in the supplementary data.
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9

Laccase-Mediated Biomaterial Synthesis

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Poly (ethylene glycol) diacrylate (PEGDA, MW 575), poly (ethylene glycol) methacrylate (PEGMA, MW 360), 2-hydro-xy-2-methylpropiophenone (HMPP), 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), mineral light oil, Span 80, Tween 20, BPA, glutaraldehyde (GA), fluorescein isothiocyanate (FITC) assay kit, and Pluronic F-127 were purchased from Sigma-Aldrich (St. Louis., MO, USA). Laccase (Lac, 1.07 U/mg) from Trametes versicolor was also purchased from Sigma-Aldrich and was used without further purification. Bradford reagent was purchased from Thermo fisher (Waltham, MA, USA). Other agents were at least of analytical grade. Citric phosphate buffer (50 mM) and ultrapure water were used in all experiments.
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10

Prostate Cancer Cell Luciferase Assay

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LAPC4 (1.0 x 105 cells/well), LNCaP (1.0 x 105 cells/well), and VCaP (1.6 x 105 cells/well) were seeded in 24-well plates with media containing 5% charcoal stripped FBS and grown for 18 h before PSEBC-TSTA (3.5 MOI) adenovirus infection, DsiRNA transfection, and treatment with vehicle (EtOH) or DHT (10 nM). Seventy-two hours following infection, cells were washed once with HBSS and lysed. Luciferase assay was performed following manufacturer guidelines (Promega) with 20 uL of each lysate. Relative luminescence unit (RLU) was normalized by protein content in each well (normalized RLU = total RLU/total protein amount). Protein concentration was estimated by adding 250 μl of Bradford reagent (ThermoFisher Scientific) to 3 μl of total lysate. Absorbance was measured using an Infinite F50 absorbance microplate reader (Tecan, Mannedorf, Switzerland) at 595 nm.
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