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8 protocols using anti creb 48h2

1

Immunofluorescence Staining of Leukemia Cells

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C8166 and MT-2 cells were cultured overnight on glass coverslips coated with poly-L-lysine. Cells were fixed with 1% paraformaldehyde and permeabilized with 0.2% Triton X-100. Fixed cells were incubated with SuperBlock buffer (Thermo Scientific) followed by staining with a Tax hybridoma (AIDS Research and Reference Program), and either anti-MEF-2A (Santa Cruz), anti-CREB (48H2; Cell Signaling), or anti-IRAK1 (D51G7; Cell Signaling) rabbit antibodies. Cover slips were incubated with Alexa Fluor 555-conjugated donkey anti-mouse IgG, Alexa Fluor 488-conjugated donkey anti-rabbit IgG (Life Technologies) and DAPI. Images were obtained using a Nikon C1si confocal microscope.
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2

Characterization of cAMP Signaling Modulators

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GIBCO cell culture media, serum, and antibiotics were obtained from Invitrogen. All chemicals were obtained from Sigma: a general PDE inhibitor IBMX (Cat# I5879); a specific PDE4 inhibitor rolipram (Cat# R6520); a specific PDE3 inhibitor cilostamide (Cat# C7971); β-AR agonist isoproterenol hydrochloride (ISO, Cat# I6504); PKA inhibitor fragment 14–22, myristoylated trifluoroacetate salt (PKI, Cat# P9115); forskolin (FSK, F6886); H89 dihydrochloride hydrate (H89, B1427), vehicle control dimethyl sulfoxide (DMSO, Cat# D4540). Antibodies used were as follows: anti-α-actinin (clone BM-75.2, Sigma, Cat# A5044), anti-Flag (M2, Sigma, Cat# F1804), anti-VSV-G (Sigma, Cat# V4888,), anti-V5-agarose affinity gel (V5-10, Sigma, Cat# A7345), anti-Myc (4A6, EMD Millipore, Cat# 05-724), anti-V5 (Invitrogen, Cat# R96025), anti-GFP (Clontech, Cat# 632375 and Cat# 632592), anti-phospho-CREB at Ser133 (87G3, cell signaling, Cat# 9198), anti-CREB (48H2, cell signaling, Cat#3955). AKAP-Lbc polyclonal antibody VO96 were previously described [44 (link)].
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3

CREB Phosphorylation Immunoblot Analysis

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BMDM protein lysates were subjected to SDS‐PAGE 10% polyacrylamide electrophoresis (NuPAGE, Thermofisher) and transferred onto a nitrocellulose membrane (iBlot, Thermofisher) according to manufacturer's protocol. Membranes were blocked for 1 hour in 5% milk (Marvel) and probed with the following antibodies overnight at 4°C: anti‐CREB (48H2, Cell signaling), anti‐P‐Ser133 CREB (87G3, Cell signaling), and anti‐beta‐actin (ab8227, Abcam), then detected using a peroxidase‐coupled secondary anti‐rabbit antibody (7074, Cell signaling) and enhanced chemiluminescence (WBLUF0500, Millipore).
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4

Molecular Signaling Analysis in FBS-Treated Cells

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Fetal bovine serum (FBS) was purchased from Cytiva (Marlborough, MA, USA). Reverse transcriptase and SYBR green reagents were obtained from ThermoFisher (ThermoFisher Scientific, Waltham, MA, USA). Antibodies were obtained from different sources: anti-β-actin (Novus Cat. # NB600-501; St. Louis, MO, USA), anti-FGF21 (abcam Cat. #ab171941), anti-phospho-Akt (Ser473) (Cell Signaling, Cat. # 9271; Danvers, MA, USA), anti-Akt (Cell Signaling, Cat. # 4691), anti-phospho-CREB (87G3) (Cell Signaling, Cat. # 9197), anti-CREB (48H2) (Cell Signaling Cat. # 9197), anti-phospho-JNK (Thr183/Thr185) (Cell Signaling, Cat. # 9251), anti-JNK (Cell Signaling, Cat. # 9258), anti-phospho-p38 (Thr182) (Santa Cruz Cat. # sc-7973), anti-p38 (Cell Signaling, Cat. # 9212), anti-phospho-NF-κB p65 (S536) (R&D Systems, Cat. # KCB7226; Minneapolis, MN, USA), and anti-NF-κB p65 (Cell Signaling, Cat. # 8242). The materials for the animal diets were obtained from Research Diets Inc. (New Brunswick, NJ, USA). Glucosamine hydrochloride (Cat. 66842), along with all other unspecified chemicals and reagents utilized in this project, was procured from Sigma-Aldrich (St. Louis, MO, USA).
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5

MCF-7 Cell Fractionation and Western Blot

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MCF-7 cells were washed twice with PBS and then mechanically detached with PBS. One third of the cells were centrifuged and solubilized in RIPA buffer for the total fraction. The remaining two thirds were centrifuged at 1200 rpm for 10 min at 4°C. Pellets for fractionation were resuspended in hypotonic buffer (10 mM Tris, pH 8.0, 10 mM KCl, 2 mM phenylmethylsulfonyl fluoride plus protease inhibitor mixture) to allow cell swelling for 2 min at 4°C. Then, Nonidet P-40 was added to a final concentration of 0.4%. Samples were centrifuged at 2,000 rpm for 5 min at 4°C and the supernatants collected as the cytoplasmic fractions. Pellets containing cell nuclei were washed once with hypotonic buffer and then extracted with high salt lysis buffer (50 mM Tris pH 8.0, 5 mM EDTA, pH 8.0, 1% Nonidet P-40, 400 mM NaCl, 2 mM phenylmethylsulfonyl fluoride plus protease inhibitor mixture) and sonicated. Equal amounts of proteins were loaded onto SDS acrylamide gel, transferred onto nitrocellose membranes, and blotted with anti-DDR1 (C-20), anti IGF-IR (Cell Signaling Technology), anti-β-tubulin, and anti-CREB 48H2 (Cell Signaling Technology) antibodies.
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6

Western Blot Analysis of Protein Modifications

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Western blot analysis was performed as described previously.15 (link) For detection of phosphoproteins, PhosStop (Roche, Penzberg, Germany) was added to the lysis buffer. The following antibodies were used for detection: anti-HDAC8 (H-145) (polyclonal; Santa Cruz, Santa Cruz, CA, USA), anti-acetyl tubulin (clone 6-11B-1; Sigma), anti-acetyl-histone H4 (polyclonal; Upstate, Lake Placid, NY, USA), anti-acetyl-SMC3 (provided by Prof. K Shirahige, University of Tokyo, Tokyo, Japan), anti p21waf1/cip1 (clone CP74; Merck), anti-Trk (C-14) (polyclonal; Santa Cruz), anti-neurofilament-M (polyclonal; Merck), anti-β-actin (clone AC-15; Sigma), anti-P-CREB (Ser133; Cell Signaling, Danvers, MA, USA), anti-CREB (48H2; Cell Signaling) and anti-GAPDH (clone 6C5; Merck).
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7

Toll-Like Receptor Signaling Assays

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LPS (TLR4 ligand) from Escherichia coli serotype 055:B5, (−)-N6-(2-Phenylisopropyl) adenosine (R-PIA), dibutyryl cAMP (dbcAMP) and forskolin were obtained from Sigma. Pam2CSK4 (TLR2/TLR6 ligand), poly(I:C)-HMW (TLR 3 ligand), imiquimod (TLR7 ligand) and CpG ODN 2395 (TLR9 ligand) were purchased from InvivoGen. Resiquimod (TLR7/8 ligand) was kindly provided by Dr. Marianela Candolfi (INBIOMED-UBA-CONICET). Imiquimod was dissolved in water, according to the manufacturer's instructions. The rabbit monoclonal anti-Phospho-CREB (Ser133) (87G3) and anti-CREB (48H2) were purchased from Cell Signaling. KT5720 was obtained from Tocris Bioscience. The mouse monoclonal antibody anti-gF of RSV was obtained from US Biological Life Sciences. Secondary goat anti-mouse FluoroLinkTM CyTM3 antibodies were purchased from GE Healthcare. The peroxidase-conjugated goat anti-rabbit antibodies and Dapi for nucleic acid staining were obtained from Sigma.
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8

SOX3 Expression Regulation by CREB

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Whole cell lysates (WCL) were prepared 48 h after transient transfection of NT2/D1 cells with 10 μg of either empty pcDNA3 or pcDNA3CREB expression vector and 40 μl of FuGENEⓇ HD Transfection Reagent (Roche Diagnostics) as recommended by manufacturer. When dominant-negative inhibitor of CREB was used, co-transfections were performed with 5 μg of either empty pRcCMV500 or A-CREB expression vector as described (12) (link). In induction experiments, WCLs were prepared from either untreated or NT2/D1 cells treated with 10 μM RA (Sigma-Aldrich) for different periods of time (1, 2, 4, 8, 24 and 48 h) with addition of NaF (50 mM final). Western blots were performed as described (13) (link) using anti-SOX3 (H-135, Santa Cruz), anti-α-tubulin (DM1A, Calbiochem), anti-CREB (48H2) and anti-phospho-CREB (Ser133) (Cell Signaling Technology) antibodies.
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