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Alexa fluor 594 conjugated donkey anti mouse igg

Manufactured by Thermo Fisher Scientific
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Alexa Fluor 594-conjugated donkey anti-mouse IgG is a secondary antibody used in immunoassays and other applications where detection of mouse primary antibodies is required. It is conjugated to the Alexa Fluor 594 fluorescent dye, which can be detected using appropriate instrumentation.

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25 protocols using alexa fluor 594 conjugated donkey anti mouse igg

1

Multicolor Immunofluorescence for Lymphoid Markers

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Brain tissue fixed in paraformaldehyde was embedded in paraffin and coronally sectioned for immunofluorescent staining. All sections were deparaffinized and rehydrated, heated with either citrate buffer (pH 6) or Tris-EDTA buffer (pH 9) for antigen retrieval, and then blocked with 20% normal horse serum. Depending on the stain, sections were incubated with primary antibodies of:
(1) rat anti-mouse B220 (1:100; BD, Franklin Lakes, NJ) and rabbit anti-mouse CD3e (1:100; Invitrogen, Waltham, MA), followed by the secondary antibodies Alexa Fluor 488-conjugated donkey anti-rat and Cy5-conjugated donkey anti-rabbit (both 1:100), respectively;
(2) rabbit anti-mouse syndecan-1 (SDC1) (1:100; Sino Biological, Wayne, PA) and Alexa Fluor 594-conjugated donkey anti-mouse IgG (1:300), followed by the secondary antibodies Alexa Fluor 488-conjugated donkey anti-rabbit (1:100) and Alexa Fluor 594-conjugated donkey anti-mouse IgG (1:500), respectively;
(3) rat anti-human/mouse activation-induced cytidine deaminase (AID) (1:50; Invitrogen, Waltham, MA), followed by biotin-conjugated donkey anti-rat and amplified by the Tyramine Signal Amplification (TSA) Cyanine 5 System from Perkin Elmer (Waltham, MA).
All fluorophore-conjugated antibodies were from Jackson ImmunoResearch (West Grove, PA).
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2

Immunofluorescence Staining of Stem Cells

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Cells were fixed in 4% paraformaldehyde/PBS for 15 min at room temperature and permeabilized with 1% Triton X-100/PBS (Sigma) for 10 min. After blocking with 10% donkey serum in PBS (Jackson ImmunoResearch) for 1 h at room temperature, cells were incubated with primary antibodies overnight at 4 °C, followed by incubation with appropriate fluorescent-conjugated secondary antibodies for 1 h at room temperature the next day. Primary antibodies were as follows: OCT4 (Abcam), SOX2 (Abcam), SSEA4 (Abcam), TFAP2C (Santa Cruz), PRDM14 (Abcam), and NANOS3 (Abcam). Secondary antibodies were as follows: AlexaFluor 488 conjugated donkey anti-rabbit IgG and AlexaFluor 594 conjugated donkey anti-mouse IgG (all Life Technologies). The nuclei were counterstained with DAPI (Thermo Fisher Scientific). The cells were observed with a Zeiss inverted confocal microscope.
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3

Immunohistochemical Labeling of Neuronal Nuclei

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Cryostat sections (40-μm thickness) were pre-incubated with blocking buffer (2% goat serum, 0.1% bovine serum albumin and 0.3% Triton X-100 in 0.1 M PB) at room temperature, and then incubated with mouse anti-NeuN (1 mg/ml; Millipore, Temecula, CA) overnight. After washing, the sections were incubated with biotinylated anti-mouse IgG secondary antibody (5 mg/ml; Vector laboratories, Burlingame, CA) for 2 hrs. Sections were visualized by the DAB method, using ABC reagents using a Vector ABC kit (Vector laboratories) and peroxidase substrate solution (Vector laboratories). For fluorescence images, sections were incubated with Alexa Fluor 594-conjugated donkey anti-mouse IgG (Life Technologies Corporation, Grand Island, NY; 1:1000).
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4

Immunohistochemical Labeling of Neuronal Nuclei

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Cryostat sections (40-μm thickness) were pre-incubated with blocking buffer (2% goat serum, 0.1% bovine serum albumin and 0.3% Triton X-100 in 0.1 M PB) at room temperature, and then incubated with mouse anti-NeuN (1 mg/ml; Millipore, Temecula, CA) overnight. After washing, the sections were incubated with biotinylated anti-mouse IgG secondary antibody (5 mg/ml; Vector laboratories, Burlingame, CA) for 2 hrs. Sections were visualized by the DAB method, using ABC reagents using a Vector ABC kit (Vector laboratories) and peroxidase substrate solution (Vector laboratories). For fluorescence images, sections were incubated with Alexa Fluor 594-conjugated donkey anti-mouse IgG (Life Technologies Corporation, Grand Island, NY; 1:1000).
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5

Immunofluorescence Staining of Epithelial Cells

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Chloral hydrate was obtained from Abbott Laboratories (North Chicago, IL, USA). FITC-dextran (3–5 kDa), dimethyl sulfoxide (DMSO), Triton X-100 and paraformaldehyde were purchased from Sigma-Aldrich (St. Louis, MO, USA). Alizarin carmine was obtained from Chroma (Stuttgart, Germany). Texas Red-X phalloidin and the rabbit polyclonal antibody against ZO-1 were purchased from Zymed-Invitrogen (Carlsbad, CA, USA). Mouse monoclonal antibodies against Na,K- ATPase were obtained from Santa Cruz Biotechnology (Dallas, TX, USA), and the rabbit monoclonal antibody against Ki67 was purchased from Abcam (Cambridge, MA, USA). Alexa Fluor 488-conjugated donkey anti-rabbit IgG and Alexa Fluor 594-conjugated donkey anti-mouse IgG were purchased from Invitrogen-Gibco (Carlsbad, CA, USA). Hoechst 33342 and BSA were obtained from Vector Laboratories (Burlingame, CA, USA).
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6

Immunohistochemical Analysis of Stroke in Mice

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At 14 days after stroke, mice were perfused with ice-cold PBS followed by 4% phosphate-buffered paraformaldehyde. Brains were removed and cryoprotected in 30% sucrose at 4°C overnight. Frozen coronal sections (20 μm thick) were cut using a cryostat (CM1950 Leica Microsystems Inc., Buffalo Grove, IL, United States) and stored at -80°C. Immunohistochemistry was performed as described previously (Zhao et al., 2004 (link)). The primary antibodies were: goat anti-doublecortin (DCX, Santa Cruz Biotechnology, Santa Cruz, CA, United States), rat anti-BrdU (ab6326, Abcam, Cambridge, MA), rabbit anti-Sox2 (ab92494, Abcam), goat anti-CD31 (AF3628, R&D Systems, Minneapolis, MN, United States), mouse anti-NeuN (MAB377, Millipore, MA, United States). The secondary antibodies used were: Alexa Fluor 594-conjugated donkey anti-rabbit IgG, Alexa Fluor 594-conjugated donkey anti-goat IgG, Alexa Fluor 594-conjugated donkey anti-mouse IgG, Alexa Fluor 488-conjugated donkey anti-rat IgG (all from Invitrogen, Waltham, MA, United States).
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7

Angiogenesis Pathway Activation Assay

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Antibodies: BrdU (11,170,376,001) was purchased from Roche, CD31 (222,783) was purchased from Abcam. Alexa Fluor 488-conjugated goat anti-rabbit IgG (R37116), and Alexa Fluor 594-conjugated donkey anti-mouse IgG (R37115) were purchased from Invitrogen. Phosphatidylinositol-3-hydroxykinase (PI3K, 17,366), phosphorylated protein kinase B (PKB; also known as AKT) (p-AKT, 4060), Rat sarcoma (Ras, 67,648), phosphorylated rapidly accelerated fibrosarcoma (p-Raf, 20,011), and phosphorylated extracellular signal-regulated kinase (p-ERK1/2, 4370) were purchased from Cell Signaling. β-actin (A5441) was purchased from Sigma-Aldrich.
Reagents: Dulbecco’s Modified Eagle Medium (DMEM, 1966-025) and fetal bovine serum (FBS, 10,099,141) were purchased from Gibco, penicillin-streptomycin (15,140,122) was purchased from Thermo Fisher. Atr I (A2737), Atr III (A2987), and Pae (P0038) were purchased from Sigma. Cell counting kit-8 (CCK8) assay (WST-8) was purchased from Dojindi Labs. matrigel (356,234) was purchased from Corning. FITC-conjugated Lycopersicon esculentum Lectin (ZB0112) was purchased from Vector.
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8

Macrophage Polarization by BMP-2 Particles

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In the first day after operation, the M0 macrophages were seeded in 24-well plates (25,000 cells per well). After overnight culture, the four doses of BMP-2/CPC particles were placed in upper chamber of Transwell system, and co-cultured for 3 d with M0 macrophages from the second day. Then, the macrophages in the lower chambers were fixed with 4% polyformaldehyde at room temperature for 15 min, and washed with PBS for following immunofluorescent staining. The prepared samples were blocked with 5% donkey serum for 30 min at room temperature, and then incubated with primary antibodies overnight at 4 °C. Alexa Fluor® 488-conjugated Donkey anti-rabbit IgG (1:200) for iNOS, Donkey anti-goat IgG (1:200) for MMR and Alexa Fluor® 594-conjugated Donkey anti-mouse IgG (1:200) for CD68 were purchased from Invitrogen (USA). The cell nuclei were stained by DAPI (Sigma, USA) for 5 min at room temperature. The iNOS- and MMR-positive cells were investigated by a fluorescent microscope (Olympus Corporation, Japan) and analyzed with ImageJ software (National Institutes of Health, USA). The primary antibodies for CD68 (1:100, ab955), iNOS (1:100 ab15323) were purchased from Abcam (UK). The primary antibodies for MMR (1:100, AF2535) was purchased from R&D system (USA).
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9

Immunofluorescence Imaging of γH2AX in Submandibular Glands

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Submandibular glands and SGm were isolated and fixed in 4% paraformaldehyde overnight at 4 °C. Tissues were paraffin-embedded and then cut into 5 μm sections. Slides were treated with HIER buffer (10 mM sodium citrate, 0.05% Tween-20, pH 6.0) for antigen retrieval in a pressure cooker for 10 minutes then sections were blocked in CAS-block histochemical reagent (Thermo Fisher Scientific, 008120). Permeabilization was performed with 0.5% Triton X-100 in PBS for 5 minutes. Immunostaining was performed overnight (at 4 °C) with primary antibody for γH2AX (EMD Millipore, 05–636). Alexa-Fluor 594-conjugated donkey anti-mouse IgG was diluted 1:500 (Invitrogen, A21203) as secondary antibody and applied on sections for 1 hour at room temperature. Following a PBS rinse, 10 μg/ml DAPI (Invitrogen, Carlsbad, CA) in PBS was applied to sections for 5 minutes. Sections were washed thrice in PBS for 5 minutes and the slides were mounted using Immu-Mount mounting medium (Thermo). Microscopic images were acquired using a Leica TCS SP5 confocal microscope with a 100X oil immersion objective and Argon laser. Analysis of images was performed in ImageJ.
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10

Immunocytochemical Analysis of MSCs

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7 × 103 MSCs were grown and treated with MV130 on chamber slides. After fixation with 4% paraformaldehyde and permeabilized with 0.05% saponin, nonspecific epitopes were blocked with PBS containing 10% donkey serum. Then, cells were sequentially incubated with the primary antibody for 45 minutes at room temperature: Texas Red-conjugated-Phalloidin (Thermo Fisher Scientific); anti-CD63 (46 (link)); anti-LAMP2 (Developmental Studies Hybridoma Bank at the University of Iowa); anti-HLA-DR (BD Biosciences); anti-paxillin (Sigma Aldrich) as appropriate. Next, cells were incubated for another 45 minutes with the appropriate secondary antibody: Alexa Fluor 594 conjugated donkey anti-mouse IgG; Alexa Fluor 488 conjugated donkey anti-rabbit IgG (both from Invitrogen, Life Technologies); DyLight 405 conjugated goat anti-mouse IgG (Jackson ImmunoResearch). Finally, a counter-staining of the nuclei was performed with Hoechst 33342 (Invitrogen, Life Technologies) for 10 minutes. After staining, preparations were mounted using FluorSave (Millipore) and imaged using a fluorescence microscope (Nikon Eclipse Ci) with a digital camera (Nikon DS-U3) and Nis-Elements D software. Images were assembled using ImageJ software.
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