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6 protocols using rat anti mouse ly6g pe

1

Multiparametric Analysis of Splenic Immune Cells

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Spleens were harvested at day 3 PI and fixed in 4% PFA. Tissue was frozen-embedded in Sub Xero freezing media (Mercedes Medical) and cut by cryostat microtome. The following antibodies were applied to sections: rat anti-mouse Ly6G-PE (BD), rabbit anti-mouse iNOS (AbCam) with either goat anti-rabbit Cascade blue (Molecular Probes) or donkey anti-rabbit AMCA (Jackson Immunoresearch), rat anti-mouse CD68 (AbCam) with goat anti-rat-Texas Red (Invitrogen). Coverslips were mounted using ProLong Gold (Life technologies). Tissue was imaged with either 20x or 63x objectives, using a Zeiss Axio Observer.Z1 (Zeiss) fluorescent microscope with Colibri.2 LED light source, an Apotome.2 (Zeiss) for optical sectioning, and an ORCA-R2 digital CCD camera (Hamamatsu). See also Supplemental Experimental Procedures.
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2

Quantifying Immune Cells after Peripheral Nerve Injury

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Mice were deeply anaesthetized using sodium pentobarbital (50 mg/kg) and then sacrificed by transcardial perfusion with 20 mL of cold PBS at 1 day or 3 days after PNI. The L4 DRG and spinal nerve, ipsilateral and contralateral to PNI, were removed immediately and placed in ice-cold PBS. Tissues were treated with collagenase D (1 mg/mL in RPRI 1640 containing 2% FCS, Roche, Mannheim, Germany) for 1 h at 37 °C with gently shaking. The tissues were homogenized by passing through a mesh. Cells were washed with RPRI 1640 (2% FCS) 2 times. The cells were immunostained with rat anti mouse CD11b-APC (0.4 μg/mL, clone: M1/70, Tonbo Biosciences, San Diego, CA, RRID: AB_2621556), rat anti mouse Ly6G-PE (2 μg/mL, clone: 1A8, BD Biosciences, Franklin Lakes, NJ, RRID: AB_394208), and rat anti mouse F4/80-PE (2 μg/mL, clone: BM8.1, Tonbo Biosciences, RRID: AB_2621795). Neutrophils were defined as CD11b+ and Ly6G+, while monocytes/macrophages were CD11b+ and F4/80+. The total number of neutrophils and monocytes/macrophages was analysed using a FACS Calibur (BD Biosciences) and FlowJo software (BD Biosciences).
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3

Isolation and Analysis of Myeloid Cells

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Tumors and lungs were minced with a razor blade followed by digestion with collagenase (1 mg/mL) and DNaseI (30 μg/mL) in RPMI with 5% FBS for 1.5 hours at 37°C. Bone marrow was obtained by flushing bones with FACS buffer (2% FBS, 1% pen/strep in PBS). Single cell suspensions were subject to erythrocyte depletion with red blood cell lysis buffer (150 mM NH4Cl, 1 mM KHCO3, 0.1 mM EDTA) followed by two washes with FACS buffer. Cells were then stained with the indicated antibodies for 10 minutes at room temperature before flow cytometry analysis. [rat anti-mouse Gr-1-PerCP (Biolegend, #108426, clone RB6-8C5); rat anti-mouse CD11b-FITC (BD Biosciences, #553310, clone M1/70); rat anti-mouse Ly6G-PE (BD Biosciences, #551461, clone 18A); rat anti-mouse Ly6C-APC (eBioscience, # 17-5932-82, clone HK1.4)] Sorting experiments were performed on a BD FACSAriaIII cell sorter and all others were analyzed on a BD FACSCantoII. Analysis was performed using FlowJo software. Average percentages were reported with error bars representing standard error of the mean.
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4

Isolation and Characterization of Murine Microglia

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Mice were anesthetized with 40 mg/kg of pentobarbital sodium and transcardially perfused with ice-cold PBS. Brain tissues were obtained, and cerebrum was dissected and separated into ipsilateral and contralateral hemispheres. Ipsilateral hemispheres were mechanically dissociated using a razor blade and placed in a 15-ml conical tube with digestion solution [0.6 mg/ml of collagenase D (Sigma)]. Then, the mixture were incubated for 30 min at 37°C. After that, a 70-μm strainer was used to generate a single-cell suspension (BD FALCON). Cells were isolated by centrifugation (30 min, 800 × g at 23°C) using 30–70% Percoll gradient solutions (GE Healthcare) (Agalave et al., 2020 (link)). Isolated cells were washed and resuspended in PBS with 0.01% bovine serum albumin (BSA) and then incubated with indicated anti-mouse antibodies for 30 min at 4°C [rat anti-mouse CD45 perCP (BD Bioscience) and rat anti-mouse CD11b FITC (BD Bioscience)]. The population of microglia (CD45 positive and CD11b positive) was sorted.
In flow cytometry, rat anti-mouse Ly6G PE and rat anti-mouse Ly6C APC (BD Bioscience) antibodies were used and incubated with CD45 perCP and CD11b FITC.
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5

Histological Analysis of Liver Inflammation

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Study of histological changes was performed on 4-µm acetone-fixed frozen sections. To investigate neutrophil infiltration in inflamed liver, immunofluorescent labeling was performed using PE rat anti-Mouse Ly6G (Cat: 551461, BD Bioscience, San Jose, CA, USA). Hoechst was used for nuclear counterstaining, and sections were coverslipped with Prolong Gold antifade reagent (Ref: P36934, Life Technologies, Eugene, OR, USA). Images were taken with a Zeiss Axiovert 200M (Carl Zeiss AG, Oberkochen, Germany) and AxioVision Rel 4.8 acquisition software.
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6

Inflammatory Signaling Pathway Characterization

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The kits for alanine aminotransferase (ALT), aspartate aminotransferase (AST), and triglyceride (TG) were supplied by Nanjing Jiancheng Bioengineering Institute (Nanjing, China). Enzyme-linked immunosorbent assay (ELISA) kits for TNF-α and IL-1β were purchased from Bender MedSystems (Vienna, Austria). PE rat anti-mouse Ly6G was obtained from BD Biosciences (New Jersey, USA). Neutrophils and F4/80 antibodies were obtained from Thermo Scientific (Rockford, IL, USA). Rabbit anti-mouse TLR4 antibody, rabbit anti-mouse phospho-IRAK1, phospho-p38, phosphor-IKKβ, IKKβ, phospho-IκBα, IκBα, phospho-p65, p38, p65, β-actin, Lamin B1, and GAPDH were purchased from Abcam (Cambridge, UK). PE rat anti-mouse F4/80, FITC rat anti-mouse CD11b, and FITC rat anti-mouse CD45 antibodies were from Biolegend, Inc. (San Diego, USA). TLR4-specific antagonist TAK-242 was from MedChemExpress LLC (Shanghai, China). Palmitic acid (PA) was from Sigma-Aldrich (St. Louis, USA).
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